Seawater carbonate chemistry and wild oyster population resistance to ocean acidification ...

The carbon dioxide induced ocean acidification (OA) process is well known to have profound effects on physiology, survival and immune responses in marine organisms, and particularly calcifiers including edible oysters. At the same time, some wild populations could develop a complex and sophisticated...

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Bibliographic Details
Main Authors: Dang, Xin, Lee, Tin Hang, Thiyagarajan, Vengatesen
Format: Dataset
Language:English
Published: PANGAEA 2023
Subjects:
pH
Online Access:https://dx.doi.org/10.1594/pangaea.958972
https://doi.pangaea.de/10.1594/PANGAEA.958972
id ftdatacite:10.1594/pangaea.958972
record_format openpolar
spelling ftdatacite:10.1594/pangaea.958972 2024-04-28T08:34:36+00:00 Seawater carbonate chemistry and wild oyster population resistance to ocean acidification ... Dang, Xin Lee, Tin Hang Thiyagarajan, Vengatesen 2023 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.958972 https://doi.pangaea.de/10.1594/PANGAEA.958972 en eng PANGAEA https://cran.r-project.org/web/packages/seacarb/index.html https://dx.doi.org/10.1016/j.envpol.2022.120813 https://dx.doi.org/10.1594/pangaea.949588 https://cran.r-project.org/web/packages/seacarb/index.html Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 Animalia Benthic animals Benthos Coast and continental shelf Containers and aquaria 20-1000 L or < 1 m**2 Crassostrea hongkongensis Immunology/Self-protection Laboratory experiment Mollusca Mortality/Survival North Pacific Other Single species Tropical Type of study Species, unique identification Species, unique identification URI Species, unique identification Semantic URI Figure Treatment Time in hours Survival Replicate Apoptosis cells Bacteria clearance in hemocytes Temperature, water Salinity Alkalinity, total pH Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbonate ion Carbon, inorganic, dissolved Aragonite saturation state Calcite saturation state Hand picking Potentiometric titration Potentiometric Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC dataset Dataset 2023 ftdatacite https://doi.org/10.1594/pangaea.95897210.1016/j.envpol.2022.12081310.1594/pangaea.949588 2024-04-02T11:36:31Z The carbon dioxide induced ocean acidification (OA) process is well known to have profound effects on physiology, survival and immune responses in marine organisms, and particularly calcifiers including edible oysters. At the same time, some wild populations could develop a complex and sophisticated immune system to cope with multiple biotic and abiotic stresses, such as bacterial infections and OA, over the long period of coevolution with the environment. However, it is unclear how immunological responses and the underlying mechanisms are altered under the combined effect of OA and bacterial infection, especially in the ecologically and economically important edible oysters. Here, we collected the wild population of oyster species Crassostrea hongkongensis (the Hong Kong oyster) from their native estuarine area and carried out a bacterial challenge with the worldwide pervasive pathogen of human foodborne disease, Vibrio parahaemolyticus, to investigate the host immune responses and molecular mechanisms ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2022) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2023-05-15. ... Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology)
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Animalia
Benthic animals
Benthos
Coast and continental shelf
Containers and aquaria 20-1000 L or < 1 m**2
Crassostrea hongkongensis
Immunology/Self-protection
Laboratory experiment
Mollusca
Mortality/Survival
North Pacific
Other
Single species
Tropical
Type of study
Species, unique identification
Species, unique identification URI
Species, unique identification Semantic URI
Figure
Treatment
Time in hours
Survival
Replicate
Apoptosis cells
Bacteria clearance in hemocytes
Temperature, water
Salinity
Alkalinity, total
pH
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Carbon, inorganic, dissolved
Aragonite saturation state
Calcite saturation state
Hand picking
Potentiometric titration
Potentiometric
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
spellingShingle Animalia
Benthic animals
Benthos
Coast and continental shelf
Containers and aquaria 20-1000 L or < 1 m**2
Crassostrea hongkongensis
Immunology/Self-protection
Laboratory experiment
Mollusca
Mortality/Survival
North Pacific
Other
Single species
Tropical
Type of study
Species, unique identification
Species, unique identification URI
Species, unique identification Semantic URI
Figure
Treatment
Time in hours
Survival
Replicate
Apoptosis cells
Bacteria clearance in hemocytes
Temperature, water
Salinity
Alkalinity, total
pH
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Carbon, inorganic, dissolved
Aragonite saturation state
Calcite saturation state
Hand picking
Potentiometric titration
Potentiometric
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
Dang, Xin
Lee, Tin Hang
Thiyagarajan, Vengatesen
Seawater carbonate chemistry and wild oyster population resistance to ocean acidification ...
topic_facet Animalia
Benthic animals
Benthos
Coast and continental shelf
Containers and aquaria 20-1000 L or < 1 m**2
Crassostrea hongkongensis
Immunology/Self-protection
Laboratory experiment
Mollusca
Mortality/Survival
North Pacific
Other
Single species
Tropical
Type of study
Species, unique identification
Species, unique identification URI
Species, unique identification Semantic URI
Figure
Treatment
Time in hours
Survival
Replicate
Apoptosis cells
Bacteria clearance in hemocytes
Temperature, water
Salinity
Alkalinity, total
pH
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Carbon, inorganic, dissolved
Aragonite saturation state
Calcite saturation state
Hand picking
Potentiometric titration
Potentiometric
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
description The carbon dioxide induced ocean acidification (OA) process is well known to have profound effects on physiology, survival and immune responses in marine organisms, and particularly calcifiers including edible oysters. At the same time, some wild populations could develop a complex and sophisticated immune system to cope with multiple biotic and abiotic stresses, such as bacterial infections and OA, over the long period of coevolution with the environment. However, it is unclear how immunological responses and the underlying mechanisms are altered under the combined effect of OA and bacterial infection, especially in the ecologically and economically important edible oysters. Here, we collected the wild population of oyster species Crassostrea hongkongensis (the Hong Kong oyster) from their native estuarine area and carried out a bacterial challenge with the worldwide pervasive pathogen of human foodborne disease, Vibrio parahaemolyticus, to investigate the host immune responses and molecular mechanisms ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2022) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2023-05-15. ...
format Dataset
author Dang, Xin
Lee, Tin Hang
Thiyagarajan, Vengatesen
author_facet Dang, Xin
Lee, Tin Hang
Thiyagarajan, Vengatesen
author_sort Dang, Xin
title Seawater carbonate chemistry and wild oyster population resistance to ocean acidification ...
title_short Seawater carbonate chemistry and wild oyster population resistance to ocean acidification ...
title_full Seawater carbonate chemistry and wild oyster population resistance to ocean acidification ...
title_fullStr Seawater carbonate chemistry and wild oyster population resistance to ocean acidification ...
title_full_unstemmed Seawater carbonate chemistry and wild oyster population resistance to ocean acidification ...
title_sort seawater carbonate chemistry and wild oyster population resistance to ocean acidification ...
publisher PANGAEA
publishDate 2023
url https://dx.doi.org/10.1594/pangaea.958972
https://doi.pangaea.de/10.1594/PANGAEA.958972
genre Ocean acidification
genre_facet Ocean acidification
op_relation https://cran.r-project.org/web/packages/seacarb/index.html
https://dx.doi.org/10.1016/j.envpol.2022.120813
https://dx.doi.org/10.1594/pangaea.949588
https://cran.r-project.org/web/packages/seacarb/index.html
op_rights Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
cc-by-4.0
op_doi https://doi.org/10.1594/pangaea.95897210.1016/j.envpol.2022.12081310.1594/pangaea.949588
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