Seawater carbonate chemistry and the intrinsic and extrinsic phenotypic characteristics and the survival of important calcifiers, the edib oysters Crassostrea angulata and C. hongkongensis ...
Ocean acidification (OA) has important effects on the intrinsic phenotypic characteristics of many marine organisms. Concomitantly, OA can alter the extended phenotypes of these organisms by perturbing the structure and function of their associated microbiomes. It is unclear, however, the extent to...
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Online Access: | https://dx.doi.org/10.1594/pangaea.958552 https://doi.pangaea.de/10.1594/PANGAEA.958552 |
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ftdatacite:10.1594/pangaea.958552 2024-04-28T08:34:51+00:00 Seawater carbonate chemistry and the intrinsic and extrinsic phenotypic characteristics and the survival of important calcifiers, the edib oysters Crassostrea angulata and C. hongkongensis ... Dang, Xin Huang, Qi He, Yuan-Qiu Gaitán-Espitia, Juan Diego Zhang, Tong Thiyagarajan, Vengatesen 2023 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.958552 https://doi.pangaea.de/10.1594/PANGAEA.958552 en eng PANGAEA https://cran.r-project.org/web/packages/seacarb/index.html https://dx.doi.org/10.1016/j.aquatox.2023.106413 https://cran.r-project.org/web/packages/seacarb/index.html Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 Animalia Benthic animals Containers and aquaria 20-1000 L or < 1 m**2 Crassostrea angulata Crassostrea hongkongensis Immunology/Self-protection Laboratory experiment Laboratory strains Mollusca Mortality/Survival Not applicable Other studied parameter or process Single species Type of study Species, unique identification Species, unique identification URI Species, unique identification Semantic URI Figure Treatment Time in days Survival Apoptosis cells Phagocytosis rate Strain Bacteria clearance in hemocytes Abundance Abundance, standard deviation Replicates Glycogen Triglycerides Albumin pH pH, standard deviation Temperature, water Temperature, water, standard deviation Salinity Salinity, standard deviation Alkalinity, total Alkalinity, total, standard deviation Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide, standard deviation Carbonate ion Carbonate ion, standard deviation Calcite saturation state Calcite saturation state, standard deviation Aragonite saturation state Aragonite saturation state, standard deviation Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air dataset Dataset 2023 ftdatacite https://doi.org/10.1594/pangaea.95855210.1016/j.aquatox.2023.106413 2024-04-02T11:36:31Z Ocean acidification (OA) has important effects on the intrinsic phenotypic characteristics of many marine organisms. Concomitantly, OA can alter the extended phenotypes of these organisms by perturbing the structure and function of their associated microbiomes. It is unclear, however, the extent to which interactions between these levels of phenotypic change can modulate the capacity for resilience to OA. Here, we explored this theoretical framework assessing the influence of OA on intrinsic (immunological responses and energy reserve) and extrinsic (gut microbiome) phenotypic characteristics and the survival of important calcifiers, the edible oysters Crassostrea angulata and C. hongkongensis. After one-month exposure to experimental OA (pH 7.4) and control (pH 8.0) conditions, we found species-specific responses characterised by elevated stress (hemocyte apoptosis) and decreased survival in the coastal species (C. angulata) compared with the estuarine species (C. hongkongensis). Phagocytosis of hemocytes ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2022) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2023-05-08. ... Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology) |
institution |
Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
English |
topic |
Animalia Benthic animals Containers and aquaria 20-1000 L or < 1 m**2 Crassostrea angulata Crassostrea hongkongensis Immunology/Self-protection Laboratory experiment Laboratory strains Mollusca Mortality/Survival Not applicable Other studied parameter or process Single species Type of study Species, unique identification Species, unique identification URI Species, unique identification Semantic URI Figure Treatment Time in days Survival Apoptosis cells Phagocytosis rate Strain Bacteria clearance in hemocytes Abundance Abundance, standard deviation Replicates Glycogen Triglycerides Albumin pH pH, standard deviation Temperature, water Temperature, water, standard deviation Salinity Salinity, standard deviation Alkalinity, total Alkalinity, total, standard deviation Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide, standard deviation Carbonate ion Carbonate ion, standard deviation Calcite saturation state Calcite saturation state, standard deviation Aragonite saturation state Aragonite saturation state, standard deviation Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air |
spellingShingle |
Animalia Benthic animals Containers and aquaria 20-1000 L or < 1 m**2 Crassostrea angulata Crassostrea hongkongensis Immunology/Self-protection Laboratory experiment Laboratory strains Mollusca Mortality/Survival Not applicable Other studied parameter or process Single species Type of study Species, unique identification Species, unique identification URI Species, unique identification Semantic URI Figure Treatment Time in days Survival Apoptosis cells Phagocytosis rate Strain Bacteria clearance in hemocytes Abundance Abundance, standard deviation Replicates Glycogen Triglycerides Albumin pH pH, standard deviation Temperature, water Temperature, water, standard deviation Salinity Salinity, standard deviation Alkalinity, total Alkalinity, total, standard deviation Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide, standard deviation Carbonate ion Carbonate ion, standard deviation Calcite saturation state Calcite saturation state, standard deviation Aragonite saturation state Aragonite saturation state, standard deviation Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Dang, Xin Huang, Qi He, Yuan-Qiu Gaitán-Espitia, Juan Diego Zhang, Tong Thiyagarajan, Vengatesen Seawater carbonate chemistry and the intrinsic and extrinsic phenotypic characteristics and the survival of important calcifiers, the edib oysters Crassostrea angulata and C. hongkongensis ... |
topic_facet |
Animalia Benthic animals Containers and aquaria 20-1000 L or < 1 m**2 Crassostrea angulata Crassostrea hongkongensis Immunology/Self-protection Laboratory experiment Laboratory strains Mollusca Mortality/Survival Not applicable Other studied parameter or process Single species Type of study Species, unique identification Species, unique identification URI Species, unique identification Semantic URI Figure Treatment Time in days Survival Apoptosis cells Phagocytosis rate Strain Bacteria clearance in hemocytes Abundance Abundance, standard deviation Replicates Glycogen Triglycerides Albumin pH pH, standard deviation Temperature, water Temperature, water, standard deviation Salinity Salinity, standard deviation Alkalinity, total Alkalinity, total, standard deviation Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide, standard deviation Carbonate ion Carbonate ion, standard deviation Calcite saturation state Calcite saturation state, standard deviation Aragonite saturation state Aragonite saturation state, standard deviation Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air |
description |
Ocean acidification (OA) has important effects on the intrinsic phenotypic characteristics of many marine organisms. Concomitantly, OA can alter the extended phenotypes of these organisms by perturbing the structure and function of their associated microbiomes. It is unclear, however, the extent to which interactions between these levels of phenotypic change can modulate the capacity for resilience to OA. Here, we explored this theoretical framework assessing the influence of OA on intrinsic (immunological responses and energy reserve) and extrinsic (gut microbiome) phenotypic characteristics and the survival of important calcifiers, the edible oysters Crassostrea angulata and C. hongkongensis. After one-month exposure to experimental OA (pH 7.4) and control (pH 8.0) conditions, we found species-specific responses characterised by elevated stress (hemocyte apoptosis) and decreased survival in the coastal species (C. angulata) compared with the estuarine species (C. hongkongensis). Phagocytosis of hemocytes ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2022) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2023-05-08. ... |
format |
Dataset |
author |
Dang, Xin Huang, Qi He, Yuan-Qiu Gaitán-Espitia, Juan Diego Zhang, Tong Thiyagarajan, Vengatesen |
author_facet |
Dang, Xin Huang, Qi He, Yuan-Qiu Gaitán-Espitia, Juan Diego Zhang, Tong Thiyagarajan, Vengatesen |
author_sort |
Dang, Xin |
title |
Seawater carbonate chemistry and the intrinsic and extrinsic phenotypic characteristics and the survival of important calcifiers, the edib oysters Crassostrea angulata and C. hongkongensis ... |
title_short |
Seawater carbonate chemistry and the intrinsic and extrinsic phenotypic characteristics and the survival of important calcifiers, the edib oysters Crassostrea angulata and C. hongkongensis ... |
title_full |
Seawater carbonate chemistry and the intrinsic and extrinsic phenotypic characteristics and the survival of important calcifiers, the edib oysters Crassostrea angulata and C. hongkongensis ... |
title_fullStr |
Seawater carbonate chemistry and the intrinsic and extrinsic phenotypic characteristics and the survival of important calcifiers, the edib oysters Crassostrea angulata and C. hongkongensis ... |
title_full_unstemmed |
Seawater carbonate chemistry and the intrinsic and extrinsic phenotypic characteristics and the survival of important calcifiers, the edib oysters Crassostrea angulata and C. hongkongensis ... |
title_sort |
seawater carbonate chemistry and the intrinsic and extrinsic phenotypic characteristics and the survival of important calcifiers, the edib oysters crassostrea angulata and c. hongkongensis ... |
publisher |
PANGAEA |
publishDate |
2023 |
url |
https://dx.doi.org/10.1594/pangaea.958552 https://doi.pangaea.de/10.1594/PANGAEA.958552 |
genre |
Ocean acidification |
genre_facet |
Ocean acidification |
op_relation |
https://cran.r-project.org/web/packages/seacarb/index.html https://dx.doi.org/10.1016/j.aquatox.2023.106413 https://cran.r-project.org/web/packages/seacarb/index.html |
op_rights |
Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 |
op_doi |
https://doi.org/10.1594/pangaea.95855210.1016/j.aquatox.2023.106413 |
_version_ |
1797591380778811392 |