Seawater carbonate chemistry and dissolution of larval and juvenile oyster shells ...
Biomineralization is one of the key biochemical processes in calcifying bivalve species such as oysters that is affected by ocean acidification (OA). Larval life stages of oysters are made of aragonite crystals whereas the adults are made of calcite and/or aragonite. Though both calcite and aragonit...
Main Authors: | , , , , , , |
---|---|
Format: | Dataset |
Language: | English |
Published: |
PANGAEA
2023
|
Subjects: | |
Online Access: | https://dx.doi.org/10.1594/pangaea.957918 https://doi.pangaea.de/10.1594/PANGAEA.957918 |
id |
ftdatacite:10.1594/pangaea.957918 |
---|---|
record_format |
openpolar |
spelling |
ftdatacite:10.1594/pangaea.957918 2024-04-28T08:34:43+00:00 Seawater carbonate chemistry and dissolution of larval and juvenile oyster shells ... Chandra Rajan, Kanmani Li, Yang Dang, Xin Lim, Yong Kian Suzuki, Michio Lee, Seung Woo Thiyagarajan, Vengatesen 2023 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.957918 https://doi.pangaea.de/10.1594/PANGAEA.957918 en eng PANGAEA https://cran.r-project.org/web/packages/seacarb/index.html https://dx.doi.org/10.1098/rspb.2022.1216 https://cran.r-project.org/web/packages/seacarb/index.html Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 Animalia Benthic animals Benthos Bottles or small containers/Aquaria <20 L Calcification/Dissolution Coast and continental shelf Crassostrea hongkongensis Laboratory experiment Mollusca North Pacific Pelagos Single species Tropical Zooplankton Type of study Species, unique identification Species, unique identification URI Species, unique identification Semantic URI Treatment Stage Percentage pH pH, standard deviation Temperature, water Temperature, water, standard deviation Salinity Salinity, standard deviation Alkalinity, total Alkalinity, total, standard deviation Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide, standard deviation Carbonate ion Carbonate ion, standard deviation Calcite saturation state Calcite saturation state, standard deviation Aragonite saturation state Aragonite saturation state, standard deviation Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbon, inorganic, dissolved Experiment Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC dataset Dataset 2023 ftdatacite https://doi.org/10.1594/pangaea.95791810.1098/rspb.2022.1216 2024-04-02T11:36:31Z Biomineralization is one of the key biochemical processes in calcifying bivalve species such as oysters that is affected by ocean acidification (OA). Larval life stages of oysters are made of aragonite crystals whereas the adults are made of calcite and/or aragonite. Though both calcite and aragonite are crystal polymorphs of calcium carbonate, they have different mechanical properties and hence it is important to study the micro and nano structure of different life stages of oyster shells under OA to understand the mechanisms by which OA affects biomineralization ontogeny. Here, we have studied the larval and juvenile life stages of an economically and ecologically important estuarine oyster species, Crassostrea hongkongensis, under OA with focus over shell fabrication under OA (pHNBS 7.4). We also look at the effect of parental exposure to OA on larvae and juvenile microstructure. The micro and nanostructure characterization reveals directional fabrication of oyster shells, with more organized structure as ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2022) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2023-04-20. ... Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology) |
institution |
Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
English |
topic |
Animalia Benthic animals Benthos Bottles or small containers/Aquaria <20 L Calcification/Dissolution Coast and continental shelf Crassostrea hongkongensis Laboratory experiment Mollusca North Pacific Pelagos Single species Tropical Zooplankton Type of study Species, unique identification Species, unique identification URI Species, unique identification Semantic URI Treatment Stage Percentage pH pH, standard deviation Temperature, water Temperature, water, standard deviation Salinity Salinity, standard deviation Alkalinity, total Alkalinity, total, standard deviation Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide, standard deviation Carbonate ion Carbonate ion, standard deviation Calcite saturation state Calcite saturation state, standard deviation Aragonite saturation state Aragonite saturation state, standard deviation Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbon, inorganic, dissolved Experiment Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC |
spellingShingle |
Animalia Benthic animals Benthos Bottles or small containers/Aquaria <20 L Calcification/Dissolution Coast and continental shelf Crassostrea hongkongensis Laboratory experiment Mollusca North Pacific Pelagos Single species Tropical Zooplankton Type of study Species, unique identification Species, unique identification URI Species, unique identification Semantic URI Treatment Stage Percentage pH pH, standard deviation Temperature, water Temperature, water, standard deviation Salinity Salinity, standard deviation Alkalinity, total Alkalinity, total, standard deviation Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide, standard deviation Carbonate ion Carbonate ion, standard deviation Calcite saturation state Calcite saturation state, standard deviation Aragonite saturation state Aragonite saturation state, standard deviation Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbon, inorganic, dissolved Experiment Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC Chandra Rajan, Kanmani Li, Yang Dang, Xin Lim, Yong Kian Suzuki, Michio Lee, Seung Woo Thiyagarajan, Vengatesen Seawater carbonate chemistry and dissolution of larval and juvenile oyster shells ... |
topic_facet |
Animalia Benthic animals Benthos Bottles or small containers/Aquaria <20 L Calcification/Dissolution Coast and continental shelf Crassostrea hongkongensis Laboratory experiment Mollusca North Pacific Pelagos Single species Tropical Zooplankton Type of study Species, unique identification Species, unique identification URI Species, unique identification Semantic URI Treatment Stage Percentage pH pH, standard deviation Temperature, water Temperature, water, standard deviation Salinity Salinity, standard deviation Alkalinity, total Alkalinity, total, standard deviation Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide, standard deviation Carbonate ion Carbonate ion, standard deviation Calcite saturation state Calcite saturation state, standard deviation Aragonite saturation state Aragonite saturation state, standard deviation Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbon, inorganic, dissolved Experiment Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC |
description |
Biomineralization is one of the key biochemical processes in calcifying bivalve species such as oysters that is affected by ocean acidification (OA). Larval life stages of oysters are made of aragonite crystals whereas the adults are made of calcite and/or aragonite. Though both calcite and aragonite are crystal polymorphs of calcium carbonate, they have different mechanical properties and hence it is important to study the micro and nano structure of different life stages of oyster shells under OA to understand the mechanisms by which OA affects biomineralization ontogeny. Here, we have studied the larval and juvenile life stages of an economically and ecologically important estuarine oyster species, Crassostrea hongkongensis, under OA with focus over shell fabrication under OA (pHNBS 7.4). We also look at the effect of parental exposure to OA on larvae and juvenile microstructure. The micro and nanostructure characterization reveals directional fabrication of oyster shells, with more organized structure as ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2022) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2023-04-20. ... |
format |
Dataset |
author |
Chandra Rajan, Kanmani Li, Yang Dang, Xin Lim, Yong Kian Suzuki, Michio Lee, Seung Woo Thiyagarajan, Vengatesen |
author_facet |
Chandra Rajan, Kanmani Li, Yang Dang, Xin Lim, Yong Kian Suzuki, Michio Lee, Seung Woo Thiyagarajan, Vengatesen |
author_sort |
Chandra Rajan, Kanmani |
title |
Seawater carbonate chemistry and dissolution of larval and juvenile oyster shells ... |
title_short |
Seawater carbonate chemistry and dissolution of larval and juvenile oyster shells ... |
title_full |
Seawater carbonate chemistry and dissolution of larval and juvenile oyster shells ... |
title_fullStr |
Seawater carbonate chemistry and dissolution of larval and juvenile oyster shells ... |
title_full_unstemmed |
Seawater carbonate chemistry and dissolution of larval and juvenile oyster shells ... |
title_sort |
seawater carbonate chemistry and dissolution of larval and juvenile oyster shells ... |
publisher |
PANGAEA |
publishDate |
2023 |
url |
https://dx.doi.org/10.1594/pangaea.957918 https://doi.pangaea.de/10.1594/PANGAEA.957918 |
genre |
Ocean acidification |
genre_facet |
Ocean acidification |
op_relation |
https://cran.r-project.org/web/packages/seacarb/index.html https://dx.doi.org/10.1098/rspb.2022.1216 https://cran.r-project.org/web/packages/seacarb/index.html |
op_rights |
Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 |
op_doi |
https://doi.org/10.1594/pangaea.95791810.1098/rspb.2022.1216 |
_version_ |
1797591298039873536 |