Seawater carbonate chemistry and disease susceptibility in the eastern oyster Crassostrea virginica ...

In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2021) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addi...

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Bibliographic Details
Main Authors: Keppel, Andrew G, Breitburg, Denise, Wikfors, Gary H, Burrell, Rebecca B, Clark, Virginia M
Format: Dataset
Language:English
Published: PANGAEA 2015
Subjects:
pH
Online Access:https://dx.doi.org/10.1594/pangaea.956107
https://doi.pangaea.de/10.1594/PANGAEA.956107
id ftdatacite:10.1594/pangaea.956107
record_format openpolar
spelling ftdatacite:10.1594/pangaea.956107 2024-04-28T08:34:54+00:00 Seawater carbonate chemistry and disease susceptibility in the eastern oyster Crassostrea virginica ... Keppel, Andrew G Breitburg, Denise Wikfors, Gary H Burrell, Rebecca B Clark, Virginia M 2015 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.956107 https://doi.pangaea.de/10.1594/PANGAEA.956107 en eng PANGAEA https://cran.r-project.org/web/packages/seacarb/index.html https://dx.doi.org/10.3354/meps11479 https://cran.r-project.org/web/packages/seacarb/index.html Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 Animalia Benthic animals Benthos Containers and aquaria 20-1000 L or < 1 m**2 Crassostrea virginica Growth/Morphology Laboratory experiment Laboratory strains Mollusca Not applicable Other Other studied parameter or process Oxygen Single species Type Species, unique identification Species, unique identification URI Species, unique identification Semantic URI Time point, descriptive Treatment Prevalence Prevalence, standard error Infection intensity Infection intensity, standard error Shell height Shell height, standard error Hemocytes Hemocytes, standard error Reactive oxygen species production Reactive oxygen species production, standard error Salinity Salinity, standard error Temperature, water Temperature, water, standard error Alkalinity, total Alkalinity, total, standard error Oxygen, dissolved Oxygen, dissolved, standard error pH pH, standard error Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide water at sea surface temperature wet air, standard error Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbonate ion Carbon, inorganic, dissolved Aragonite saturation state Calcite saturation state dataset Dataset 2015 ftdatacite https://doi.org/10.1594/pangaea.95610710.3354/meps11479 2024-04-02T11:36:31Z In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2021) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2023-02-28. ... Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology)
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Animalia
Benthic animals
Benthos
Containers and aquaria 20-1000 L or < 1 m**2
Crassostrea virginica
Growth/Morphology
Laboratory experiment
Laboratory strains
Mollusca
Not applicable
Other
Other studied parameter or process
Oxygen
Single species
Type
Species, unique identification
Species, unique identification URI
Species, unique identification Semantic URI
Time point, descriptive
Treatment
Prevalence
Prevalence, standard error
Infection intensity
Infection intensity, standard error
Shell height
Shell height, standard error
Hemocytes
Hemocytes, standard error
Reactive oxygen species production
Reactive oxygen species production, standard error
Salinity
Salinity, standard error
Temperature, water
Temperature, water, standard error
Alkalinity, total
Alkalinity, total, standard error
Oxygen, dissolved
Oxygen, dissolved, standard error
pH
pH, standard error
Partial pressure of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide water at sea surface temperature wet air, standard error
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Carbon, inorganic, dissolved
Aragonite saturation state
Calcite saturation state
spellingShingle Animalia
Benthic animals
Benthos
Containers and aquaria 20-1000 L or < 1 m**2
Crassostrea virginica
Growth/Morphology
Laboratory experiment
Laboratory strains
Mollusca
Not applicable
Other
Other studied parameter or process
Oxygen
Single species
Type
Species, unique identification
Species, unique identification URI
Species, unique identification Semantic URI
Time point, descriptive
Treatment
Prevalence
Prevalence, standard error
Infection intensity
Infection intensity, standard error
Shell height
Shell height, standard error
Hemocytes
Hemocytes, standard error
Reactive oxygen species production
Reactive oxygen species production, standard error
Salinity
Salinity, standard error
Temperature, water
Temperature, water, standard error
Alkalinity, total
Alkalinity, total, standard error
Oxygen, dissolved
Oxygen, dissolved, standard error
pH
pH, standard error
Partial pressure of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide water at sea surface temperature wet air, standard error
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Carbon, inorganic, dissolved
Aragonite saturation state
Calcite saturation state
Keppel, Andrew G
Breitburg, Denise
Wikfors, Gary H
Burrell, Rebecca B
Clark, Virginia M
Seawater carbonate chemistry and disease susceptibility in the eastern oyster Crassostrea virginica ...
topic_facet Animalia
Benthic animals
Benthos
Containers and aquaria 20-1000 L or < 1 m**2
Crassostrea virginica
Growth/Morphology
Laboratory experiment
Laboratory strains
Mollusca
Not applicable
Other
Other studied parameter or process
Oxygen
Single species
Type
Species, unique identification
Species, unique identification URI
Species, unique identification Semantic URI
Time point, descriptive
Treatment
Prevalence
Prevalence, standard error
Infection intensity
Infection intensity, standard error
Shell height
Shell height, standard error
Hemocytes
Hemocytes, standard error
Reactive oxygen species production
Reactive oxygen species production, standard error
Salinity
Salinity, standard error
Temperature, water
Temperature, water, standard error
Alkalinity, total
Alkalinity, total, standard error
Oxygen, dissolved
Oxygen, dissolved, standard error
pH
pH, standard error
Partial pressure of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide water at sea surface temperature wet air, standard error
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Carbon, inorganic, dissolved
Aragonite saturation state
Calcite saturation state
description In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2021) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2023-02-28. ...
format Dataset
author Keppel, Andrew G
Breitburg, Denise
Wikfors, Gary H
Burrell, Rebecca B
Clark, Virginia M
author_facet Keppel, Andrew G
Breitburg, Denise
Wikfors, Gary H
Burrell, Rebecca B
Clark, Virginia M
author_sort Keppel, Andrew G
title Seawater carbonate chemistry and disease susceptibility in the eastern oyster Crassostrea virginica ...
title_short Seawater carbonate chemistry and disease susceptibility in the eastern oyster Crassostrea virginica ...
title_full Seawater carbonate chemistry and disease susceptibility in the eastern oyster Crassostrea virginica ...
title_fullStr Seawater carbonate chemistry and disease susceptibility in the eastern oyster Crassostrea virginica ...
title_full_unstemmed Seawater carbonate chemistry and disease susceptibility in the eastern oyster Crassostrea virginica ...
title_sort seawater carbonate chemistry and disease susceptibility in the eastern oyster crassostrea virginica ...
publisher PANGAEA
publishDate 2015
url https://dx.doi.org/10.1594/pangaea.956107
https://doi.pangaea.de/10.1594/PANGAEA.956107
genre Ocean acidification
genre_facet Ocean acidification
op_relation https://cran.r-project.org/web/packages/seacarb/index.html
https://dx.doi.org/10.3354/meps11479
https://cran.r-project.org/web/packages/seacarb/index.html
op_rights Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
cc-by-4.0
op_doi https://doi.org/10.1594/pangaea.95610710.3354/meps11479
_version_ 1797591427479240704