Seawater carbonate chemistry and B/Ca, calcification rate of Emiliania huxleyi and Coccolithus braarudii ...

Coccolithophorid algae are microscopic but prolific calcifiers in modern and ancient oceans. When the pH of seawater is modified, as may occur in the future due to ocean acidification, different species and strains of coccolithophorids have exhibited diverse calcification responses in laboratory cul...

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Main Authors: Stoll, Heather M, Cruzado, Antonio, Shimizu, Nobumichi, Kanamaru, Kinuyo
Format: Dataset
Language:English
Published: PANGAEA 2012
Subjects:
pH
Online Access:https://dx.doi.org/10.1594/pangaea.949913
https://doi.pangaea.de/10.1594/PANGAEA.949913
id ftdatacite:10.1594/pangaea.949913
record_format openpolar
spelling ftdatacite:10.1594/pangaea.949913 2024-04-28T08:34:41+00:00 Seawater carbonate chemistry and B/Ca, calcification rate of Emiliania huxleyi and Coccolithus braarudii ... Stoll, Heather M Cruzado, Antonio Shimizu, Nobumichi Kanamaru, Kinuyo 2012 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.949913 https://doi.pangaea.de/10.1594/PANGAEA.949913 en eng PANGAEA https://cran.r-project.org/web/packages/seacarb/index.html https://dx.doi.org/10.1016/j.gca.2011.12.003 https://cran.r-project.org/web/packages/seacarb/index.html Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 Biomass/Abundance/Elemental composition Bottles or small containers/Aquaria <20 L Calcification/Dissolution Chromista Coccolithus braarudii Emiliania huxleyi Growth/Morphology Haptophyta Laboratory experiment Laboratory strains Not applicable Pelagos Phytoplankton Single species Temperature Type Species, unique identification Species, unique identification URI Species, unique identification Semantic URI Strain Experiment Replicate Growth rate Salinity Temperature, water Alkalinity, total Carbon, inorganic, dissolved pH Partial pressure of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbonate ion Calcite saturation state Calcification rate of calcium carbonate per cell Boron/Calcium ratio Boron/Calcium ratio, standard error Boron/Calcium ratio, standard deviation Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Aragonite saturation state Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC dataset Dataset 2012 ftdatacite https://doi.org/10.1594/pangaea.94991310.1016/j.gca.2011.12.003 2024-04-02T11:36:31Z Coccolithophorid algae are microscopic but prolific calcifiers in modern and ancient oceans. When the pH of seawater is modified, as may occur in the future due to ocean acidification, different species and strains of coccolithophorids have exhibited diverse calcification responses in laboratory culture. Since their biomineralization is a completely intracellular process, it is unclear why their response should be affected by extracellular seawater pH. Variations in the B/Cain coccoliths are potential indicators of pH shifts in the intracellular coccolith vesicle where calcification occurs, because B/Ca in abiogenic calcites increases at higher pH due to the greater abundance of borate ions, the only B species incorporated into calcite. We used a SIMS ion probe to measure B/Ca of coccoliths from three different strains of Emiliania huxleyi and one strain of Coccolithus braarudiibraarudiicultured under different seawater pH conditions to ascertain if the B/Ca can be used to elucidate how coccolithophorids ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2021) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2022-10-21. ... Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology)
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria <20 L
Calcification/Dissolution
Chromista
Coccolithus braarudii
Emiliania huxleyi
Growth/Morphology
Haptophyta
Laboratory experiment
Laboratory strains
Not applicable
Pelagos
Phytoplankton
Single species
Temperature
Type
Species, unique identification
Species, unique identification URI
Species, unique identification Semantic URI
Strain
Experiment
Replicate
Growth rate
Salinity
Temperature, water
Alkalinity, total
Carbon, inorganic, dissolved
pH
Partial pressure of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Calcite saturation state
Calcification rate of calcium carbonate per cell
Boron/Calcium ratio
Boron/Calcium ratio, standard error
Boron/Calcium ratio, standard deviation
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Aragonite saturation state
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
spellingShingle Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria <20 L
Calcification/Dissolution
Chromista
Coccolithus braarudii
Emiliania huxleyi
Growth/Morphology
Haptophyta
Laboratory experiment
Laboratory strains
Not applicable
Pelagos
Phytoplankton
Single species
Temperature
Type
Species, unique identification
Species, unique identification URI
Species, unique identification Semantic URI
Strain
Experiment
Replicate
Growth rate
Salinity
Temperature, water
Alkalinity, total
Carbon, inorganic, dissolved
pH
Partial pressure of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Calcite saturation state
Calcification rate of calcium carbonate per cell
Boron/Calcium ratio
Boron/Calcium ratio, standard error
Boron/Calcium ratio, standard deviation
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Aragonite saturation state
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
Stoll, Heather M
Cruzado, Antonio
Shimizu, Nobumichi
Kanamaru, Kinuyo
Seawater carbonate chemistry and B/Ca, calcification rate of Emiliania huxleyi and Coccolithus braarudii ...
topic_facet Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria <20 L
Calcification/Dissolution
Chromista
Coccolithus braarudii
Emiliania huxleyi
Growth/Morphology
Haptophyta
Laboratory experiment
Laboratory strains
Not applicable
Pelagos
Phytoplankton
Single species
Temperature
Type
Species, unique identification
Species, unique identification URI
Species, unique identification Semantic URI
Strain
Experiment
Replicate
Growth rate
Salinity
Temperature, water
Alkalinity, total
Carbon, inorganic, dissolved
pH
Partial pressure of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Calcite saturation state
Calcification rate of calcium carbonate per cell
Boron/Calcium ratio
Boron/Calcium ratio, standard error
Boron/Calcium ratio, standard deviation
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Aragonite saturation state
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
description Coccolithophorid algae are microscopic but prolific calcifiers in modern and ancient oceans. When the pH of seawater is modified, as may occur in the future due to ocean acidification, different species and strains of coccolithophorids have exhibited diverse calcification responses in laboratory culture. Since their biomineralization is a completely intracellular process, it is unclear why their response should be affected by extracellular seawater pH. Variations in the B/Cain coccoliths are potential indicators of pH shifts in the intracellular coccolith vesicle where calcification occurs, because B/Ca in abiogenic calcites increases at higher pH due to the greater abundance of borate ions, the only B species incorporated into calcite. We used a SIMS ion probe to measure B/Ca of coccoliths from three different strains of Emiliania huxleyi and one strain of Coccolithus braarudiibraarudiicultured under different seawater pH conditions to ascertain if the B/Ca can be used to elucidate how coccolithophorids ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2021) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2022-10-21. ...
format Dataset
author Stoll, Heather M
Cruzado, Antonio
Shimizu, Nobumichi
Kanamaru, Kinuyo
author_facet Stoll, Heather M
Cruzado, Antonio
Shimizu, Nobumichi
Kanamaru, Kinuyo
author_sort Stoll, Heather M
title Seawater carbonate chemistry and B/Ca, calcification rate of Emiliania huxleyi and Coccolithus braarudii ...
title_short Seawater carbonate chemistry and B/Ca, calcification rate of Emiliania huxleyi and Coccolithus braarudii ...
title_full Seawater carbonate chemistry and B/Ca, calcification rate of Emiliania huxleyi and Coccolithus braarudii ...
title_fullStr Seawater carbonate chemistry and B/Ca, calcification rate of Emiliania huxleyi and Coccolithus braarudii ...
title_full_unstemmed Seawater carbonate chemistry and B/Ca, calcification rate of Emiliania huxleyi and Coccolithus braarudii ...
title_sort seawater carbonate chemistry and b/ca, calcification rate of emiliania huxleyi and coccolithus braarudii ...
publisher PANGAEA
publishDate 2012
url https://dx.doi.org/10.1594/pangaea.949913
https://doi.pangaea.de/10.1594/PANGAEA.949913
genre Ocean acidification
genre_facet Ocean acidification
op_relation https://cran.r-project.org/web/packages/seacarb/index.html
https://dx.doi.org/10.1016/j.gca.2011.12.003
https://cran.r-project.org/web/packages/seacarb/index.html
op_rights Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
cc-by-4.0
op_doi https://doi.org/10.1594/pangaea.94991310.1016/j.gca.2011.12.003
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