Seawater carbonate chemistry and test density, trace elements ratios of Peneroplis spp. ...
Large Benthic Foraminifera are a crucial component of coral-reef ecosystems, which are currently threatened by ocean acidification. We conducted culture experiments to evaluate the impact of low pH on survival and test dissolution of the symbiont-bearing species Peneroplis spp., and to observe poten...
Main Authors: | , , , , , |
---|---|
Format: | Dataset |
Language: | English |
Published: |
PANGAEA
2022
|
Subjects: | |
Online Access: | https://dx.doi.org/10.1594/pangaea.947963 https://doi.pangaea.de/10.1594/PANGAEA.947963 |
id |
ftdatacite:10.1594/pangaea.947963 |
---|---|
record_format |
openpolar |
spelling |
ftdatacite:10.1594/pangaea.947963 2024-04-28T08:34:50+00:00 Seawater carbonate chemistry and test density, trace elements ratios of Peneroplis spp. ... Charrieau, Laurie M Nagai, Yukiko Kimoto, Katsunori Below, Beatrice Fujita, Kazuhiko Toyofuku, Takashi 2022 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.947963 https://doi.pangaea.de/10.1594/PANGAEA.947963 en eng PANGAEA https://cran.r-project.org/web/packages/seacarb/index.html https://dx.doi.org/10.1038/s41598-022-10375-w https://cran.r-project.org/web/packages/seacarb/index.html Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 Benthos Biomass/Abundance/Elemental composition Bottles or small containers/Aquaria <20 L Calcification/Dissolution Chromista Coast and continental shelf Foraminifera Heterotrophic prokaryotes Laboratory experiment North Pacific Peneroplis sp. Single species Temperate Type Species Experiment Experiment day Treatment pH Replicate Density Treatment Identification Boron/Calcium ratio Boron/Calcium ratio, standard deviation Zinc/Calcium ratio Zinc/Calcium ratio, standard deviation Magnesium/Calcium ratio Magnesium/Calcium ratio, standard deviation Strontium/Calcium ratio Strontium/Calcium ratio, standard deviation Manganese/Calcium ratio Manganese/Calcium ratio, standard deviation Temperature, water Salinity Salinity, standard deviation pH pH, standard deviation Alkalinity, total Alkalinity, total, standard deviation Calcite saturation state Carbonate ion Calcium Carbonate system computation flag Carbon dioxide Carbon dioxide, standard deviation Fugacity of carbon dioxide water at sea surface temperature wet air Fugacity of carbon dioxide in seawater, standard deviation Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide, standard deviation Bicarbonate ion dataset Dataset 2022 ftdatacite https://doi.org/10.1594/pangaea.94796310.1038/s41598-022-10375-w 2024-04-02T11:36:31Z Large Benthic Foraminifera are a crucial component of coral-reef ecosystems, which are currently threatened by ocean acidification. We conducted culture experiments to evaluate the impact of low pH on survival and test dissolution of the symbiont-bearing species Peneroplis spp., and to observe potential calcification recovery when specimens are placed back under reference pH value (7.9). We found that Peneroplis spp. displayed living activity up to 3 days at pH 6.9 (Omega cal < 1) or up to 1 month at pH 7.4 (Omega cal > 1), despite the dark and unfed conditions. Dissolution features were observed under low Omega cal values, such as changes in test density, peeled extrados layers, and decalcified tests with exposed organic linings. A new calcification phase started when specimens were placed back at reference pH. This calcification's resumption was an addition of new chambers without reparation of the dissolved parts, which is consistent with the porcelaneous calcification pathway of Peneroplis spp. The ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2021) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2022-09-06. ... Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology) |
institution |
Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
English |
topic |
Benthos Biomass/Abundance/Elemental composition Bottles or small containers/Aquaria <20 L Calcification/Dissolution Chromista Coast and continental shelf Foraminifera Heterotrophic prokaryotes Laboratory experiment North Pacific Peneroplis sp. Single species Temperate Type Species Experiment Experiment day Treatment pH Replicate Density Treatment Identification Boron/Calcium ratio Boron/Calcium ratio, standard deviation Zinc/Calcium ratio Zinc/Calcium ratio, standard deviation Magnesium/Calcium ratio Magnesium/Calcium ratio, standard deviation Strontium/Calcium ratio Strontium/Calcium ratio, standard deviation Manganese/Calcium ratio Manganese/Calcium ratio, standard deviation Temperature, water Salinity Salinity, standard deviation pH pH, standard deviation Alkalinity, total Alkalinity, total, standard deviation Calcite saturation state Carbonate ion Calcium Carbonate system computation flag Carbon dioxide Carbon dioxide, standard deviation Fugacity of carbon dioxide water at sea surface temperature wet air Fugacity of carbon dioxide in seawater, standard deviation Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide, standard deviation Bicarbonate ion |
spellingShingle |
Benthos Biomass/Abundance/Elemental composition Bottles or small containers/Aquaria <20 L Calcification/Dissolution Chromista Coast and continental shelf Foraminifera Heterotrophic prokaryotes Laboratory experiment North Pacific Peneroplis sp. Single species Temperate Type Species Experiment Experiment day Treatment pH Replicate Density Treatment Identification Boron/Calcium ratio Boron/Calcium ratio, standard deviation Zinc/Calcium ratio Zinc/Calcium ratio, standard deviation Magnesium/Calcium ratio Magnesium/Calcium ratio, standard deviation Strontium/Calcium ratio Strontium/Calcium ratio, standard deviation Manganese/Calcium ratio Manganese/Calcium ratio, standard deviation Temperature, water Salinity Salinity, standard deviation pH pH, standard deviation Alkalinity, total Alkalinity, total, standard deviation Calcite saturation state Carbonate ion Calcium Carbonate system computation flag Carbon dioxide Carbon dioxide, standard deviation Fugacity of carbon dioxide water at sea surface temperature wet air Fugacity of carbon dioxide in seawater, standard deviation Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide, standard deviation Bicarbonate ion Charrieau, Laurie M Nagai, Yukiko Kimoto, Katsunori Below, Beatrice Fujita, Kazuhiko Toyofuku, Takashi Seawater carbonate chemistry and test density, trace elements ratios of Peneroplis spp. ... |
topic_facet |
Benthos Biomass/Abundance/Elemental composition Bottles or small containers/Aquaria <20 L Calcification/Dissolution Chromista Coast and continental shelf Foraminifera Heterotrophic prokaryotes Laboratory experiment North Pacific Peneroplis sp. Single species Temperate Type Species Experiment Experiment day Treatment pH Replicate Density Treatment Identification Boron/Calcium ratio Boron/Calcium ratio, standard deviation Zinc/Calcium ratio Zinc/Calcium ratio, standard deviation Magnesium/Calcium ratio Magnesium/Calcium ratio, standard deviation Strontium/Calcium ratio Strontium/Calcium ratio, standard deviation Manganese/Calcium ratio Manganese/Calcium ratio, standard deviation Temperature, water Salinity Salinity, standard deviation pH pH, standard deviation Alkalinity, total Alkalinity, total, standard deviation Calcite saturation state Carbonate ion Calcium Carbonate system computation flag Carbon dioxide Carbon dioxide, standard deviation Fugacity of carbon dioxide water at sea surface temperature wet air Fugacity of carbon dioxide in seawater, standard deviation Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide, standard deviation Bicarbonate ion |
description |
Large Benthic Foraminifera are a crucial component of coral-reef ecosystems, which are currently threatened by ocean acidification. We conducted culture experiments to evaluate the impact of low pH on survival and test dissolution of the symbiont-bearing species Peneroplis spp., and to observe potential calcification recovery when specimens are placed back under reference pH value (7.9). We found that Peneroplis spp. displayed living activity up to 3 days at pH 6.9 (Omega cal < 1) or up to 1 month at pH 7.4 (Omega cal > 1), despite the dark and unfed conditions. Dissolution features were observed under low Omega cal values, such as changes in test density, peeled extrados layers, and decalcified tests with exposed organic linings. A new calcification phase started when specimens were placed back at reference pH. This calcification's resumption was an addition of new chambers without reparation of the dissolved parts, which is consistent with the porcelaneous calcification pathway of Peneroplis spp. The ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2021) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2022-09-06. ... |
format |
Dataset |
author |
Charrieau, Laurie M Nagai, Yukiko Kimoto, Katsunori Below, Beatrice Fujita, Kazuhiko Toyofuku, Takashi |
author_facet |
Charrieau, Laurie M Nagai, Yukiko Kimoto, Katsunori Below, Beatrice Fujita, Kazuhiko Toyofuku, Takashi |
author_sort |
Charrieau, Laurie M |
title |
Seawater carbonate chemistry and test density, trace elements ratios of Peneroplis spp. ... |
title_short |
Seawater carbonate chemistry and test density, trace elements ratios of Peneroplis spp. ... |
title_full |
Seawater carbonate chemistry and test density, trace elements ratios of Peneroplis spp. ... |
title_fullStr |
Seawater carbonate chemistry and test density, trace elements ratios of Peneroplis spp. ... |
title_full_unstemmed |
Seawater carbonate chemistry and test density, trace elements ratios of Peneroplis spp. ... |
title_sort |
seawater carbonate chemistry and test density, trace elements ratios of peneroplis spp. ... |
publisher |
PANGAEA |
publishDate |
2022 |
url |
https://dx.doi.org/10.1594/pangaea.947963 https://doi.pangaea.de/10.1594/PANGAEA.947963 |
genre |
Ocean acidification |
genre_facet |
Ocean acidification |
op_relation |
https://cran.r-project.org/web/packages/seacarb/index.html https://dx.doi.org/10.1038/s41598-022-10375-w https://cran.r-project.org/web/packages/seacarb/index.html |
op_rights |
Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 |
op_doi |
https://doi.org/10.1594/pangaea.94796310.1038/s41598-022-10375-w |
_version_ |
1797591378123816960 |