Seawater carbonate chemistry and allele frequencygene, expression plasticity, genetic diversity and egg production rate of marine copepod ...

Adaptive evolution and phenotypic plasticity will fuel resilience in the geologically unprecedented warming and acidification of the earth's oceans, however, we have much to learn about the interactions and costs of these mechanisms of resilience. Here, using 20 generations of experimental evol...

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Main Authors: Brennan, Reid S, deMayo, James A, Dam, Hans G, Finiguerra, Michael B, Baumann, Hannes, Pespeni, Melissa H
Format: Dataset
Language:English
Published: PANGAEA 2022
Subjects:
pH
Online Access:https://dx.doi.org/10.1594/pangaea.946063
https://doi.pangaea.de/10.1594/PANGAEA.946063
id ftdatacite:10.1594/pangaea.946063
record_format openpolar
spelling ftdatacite:10.1594/pangaea.946063 2024-06-09T07:48:23+00:00 Seawater carbonate chemistry and allele frequencygene, expression plasticity, genetic diversity and egg production rate of marine copepod ... Brennan, Reid S deMayo, James A Dam, Hans G Finiguerra, Michael B Baumann, Hannes Pespeni, Melissa H 2022 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.946063 https://doi.pangaea.de/10.1594/PANGAEA.946063 en eng PANGAEA https://cran.r-project.org/web/packages/seacarb/index.html https://dx.doi.org/10.1038/s41467-022-28742-6 https://cran.r-project.org/web/packages/seacarb/index.html Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 Acartia tonsa Animalia Arthropoda Bottles or small containers/Aquaria <20 L Coast and continental shelf Development Gene expression incl. proteomics Laboratory experiment Mortality/Survival North Atlantic Other Pelagos Reproduction FOS Medical biotechnology Single species Temperate Temperature Zooplankton Type Species, unique identification Species, unique identification URI Species, unique identification Semantic URI Figure Principal component 1 Principal component 2 Identification Treatment Group Generation Counts Score Nucleotide diversity Phytoplankton, biomass as carbon Eggs, hatched Eggs, unhatched Egg production rate per female Hatching frequency Replicate Time in days Survival Proportion of survival Reproductive rate Temperature, water pH Alkalinity, total Salinity Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide water at sea surface temperature wet air Dataset dataset 2022 ftdatacite https://doi.org/10.1594/pangaea.94606310.1038/s41467-022-28742-6 2024-05-13T12:25:55Z Adaptive evolution and phenotypic plasticity will fuel resilience in the geologically unprecedented warming and acidification of the earth's oceans, however, we have much to learn about the interactions and costs of these mechanisms of resilience. Here, using 20 generations of experimental evolution followed by three generations of reciprocal transplants, we investigated the relationship between adaptation and plasticity in the marine copepod, Acartia tonsa, in future global change conditions (high temperature and high CO2). We found parallel adaptation to global change conditions in genes related to stress response, gene expression regulation, actin regulation, developmental processes, and energy production. However, reciprocal transplantation showed that adaptation resulted in a loss of transcriptional plasticity, reduced fecundity, and reduced population growth when global change-adapted animals were returned to ambient conditions or reared in low food conditions. However, after three successive ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2021) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2022-07-07.AM= ambient pH, OWA=future warming and acidification conditions ... Dataset North Atlantic Ocean acidification DataCite Metadata Store (German National Library of Science and Technology)
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Acartia tonsa
Animalia
Arthropoda
Bottles or small containers/Aquaria <20 L
Coast and continental shelf
Development
Gene expression incl. proteomics
Laboratory experiment
Mortality/Survival
North Atlantic
Other
Pelagos
Reproduction
FOS Medical biotechnology
Single species
Temperate
Temperature
Zooplankton
Type
Species, unique identification
Species, unique identification URI
Species, unique identification Semantic URI
Figure
Principal component 1
Principal component 2
Identification
Treatment
Group
Generation
Counts
Score
Nucleotide diversity
Phytoplankton, biomass as carbon
Eggs, hatched
Eggs, unhatched
Egg production rate per female
Hatching frequency
Replicate
Time in days
Survival
Proportion of survival
Reproductive rate
Temperature, water
pH
Alkalinity, total
Salinity
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide water at sea surface temperature wet air
spellingShingle Acartia tonsa
Animalia
Arthropoda
Bottles or small containers/Aquaria <20 L
Coast and continental shelf
Development
Gene expression incl. proteomics
Laboratory experiment
Mortality/Survival
North Atlantic
Other
Pelagos
Reproduction
FOS Medical biotechnology
Single species
Temperate
Temperature
Zooplankton
Type
Species, unique identification
Species, unique identification URI
Species, unique identification Semantic URI
Figure
Principal component 1
Principal component 2
Identification
Treatment
Group
Generation
Counts
Score
Nucleotide diversity
Phytoplankton, biomass as carbon
Eggs, hatched
Eggs, unhatched
Egg production rate per female
Hatching frequency
Replicate
Time in days
Survival
Proportion of survival
Reproductive rate
Temperature, water
pH
Alkalinity, total
Salinity
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide water at sea surface temperature wet air
Brennan, Reid S
deMayo, James A
Dam, Hans G
Finiguerra, Michael B
Baumann, Hannes
Pespeni, Melissa H
Seawater carbonate chemistry and allele frequencygene, expression plasticity, genetic diversity and egg production rate of marine copepod ...
topic_facet Acartia tonsa
Animalia
Arthropoda
Bottles or small containers/Aquaria <20 L
Coast and continental shelf
Development
Gene expression incl. proteomics
Laboratory experiment
Mortality/Survival
North Atlantic
Other
Pelagos
Reproduction
FOS Medical biotechnology
Single species
Temperate
Temperature
Zooplankton
Type
Species, unique identification
Species, unique identification URI
Species, unique identification Semantic URI
Figure
Principal component 1
Principal component 2
Identification
Treatment
Group
Generation
Counts
Score
Nucleotide diversity
Phytoplankton, biomass as carbon
Eggs, hatched
Eggs, unhatched
Egg production rate per female
Hatching frequency
Replicate
Time in days
Survival
Proportion of survival
Reproductive rate
Temperature, water
pH
Alkalinity, total
Salinity
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide water at sea surface temperature wet air
description Adaptive evolution and phenotypic plasticity will fuel resilience in the geologically unprecedented warming and acidification of the earth's oceans, however, we have much to learn about the interactions and costs of these mechanisms of resilience. Here, using 20 generations of experimental evolution followed by three generations of reciprocal transplants, we investigated the relationship between adaptation and plasticity in the marine copepod, Acartia tonsa, in future global change conditions (high temperature and high CO2). We found parallel adaptation to global change conditions in genes related to stress response, gene expression regulation, actin regulation, developmental processes, and energy production. However, reciprocal transplantation showed that adaptation resulted in a loss of transcriptional plasticity, reduced fecundity, and reduced population growth when global change-adapted animals were returned to ambient conditions or reared in low food conditions. However, after three successive ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2021) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2022-07-07.AM= ambient pH, OWA=future warming and acidification conditions ...
format Dataset
author Brennan, Reid S
deMayo, James A
Dam, Hans G
Finiguerra, Michael B
Baumann, Hannes
Pespeni, Melissa H
author_facet Brennan, Reid S
deMayo, James A
Dam, Hans G
Finiguerra, Michael B
Baumann, Hannes
Pespeni, Melissa H
author_sort Brennan, Reid S
title Seawater carbonate chemistry and allele frequencygene, expression plasticity, genetic diversity and egg production rate of marine copepod ...
title_short Seawater carbonate chemistry and allele frequencygene, expression plasticity, genetic diversity and egg production rate of marine copepod ...
title_full Seawater carbonate chemistry and allele frequencygene, expression plasticity, genetic diversity and egg production rate of marine copepod ...
title_fullStr Seawater carbonate chemistry and allele frequencygene, expression plasticity, genetic diversity and egg production rate of marine copepod ...
title_full_unstemmed Seawater carbonate chemistry and allele frequencygene, expression plasticity, genetic diversity and egg production rate of marine copepod ...
title_sort seawater carbonate chemistry and allele frequencygene, expression plasticity, genetic diversity and egg production rate of marine copepod ...
publisher PANGAEA
publishDate 2022
url https://dx.doi.org/10.1594/pangaea.946063
https://doi.pangaea.de/10.1594/PANGAEA.946063
genre North Atlantic
Ocean acidification
genre_facet North Atlantic
Ocean acidification
op_relation https://cran.r-project.org/web/packages/seacarb/index.html
https://dx.doi.org/10.1038/s41467-022-28742-6
https://cran.r-project.org/web/packages/seacarb/index.html
op_rights Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
cc-by-4.0
op_doi https://doi.org/10.1594/pangaea.94606310.1038/s41467-022-28742-6
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