Seawater carbonate chemistry and growth rates, carbon utilization and the internal pH regulation at the site of calcification in Emiliania huxleyi, Calcidiscus leptoporus and Pleurochrysis ...

Ocean acidification (OA) appears to have diverse impacts on calcareous coccolithophores, but the cellular processes underlying these responses are not well understood. Here we use stable boron and carbon isotopes, B/Ca ratios, as well as inorganic and organic carbon production rates to investigate t...

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Bibliographic Details
Main Authors: Liu, Yiwei, Rokitta, Sebastian D, Rost, Björn, Eagle, Robert A
Format: Dataset
Language:English
Published: PANGAEA 2021
Subjects:
pH
Online Access:https://dx.doi.org/10.1594/pangaea.943274
https://doi.pangaea.de/10.1594/PANGAEA.943274
id ftdatacite:10.1594/pangaea.943274
record_format openpolar
spelling ftdatacite:10.1594/pangaea.943274 2024-09-09T20:01:33+00:00 Seawater carbonate chemistry and growth rates, carbon utilization and the internal pH regulation at the site of calcification in Emiliania huxleyi, Calcidiscus leptoporus and Pleurochrysis ... Liu, Yiwei Rokitta, Sebastian D Rost, Björn Eagle, Robert A 2021 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.943274 https://doi.pangaea.de/10.1594/PANGAEA.943274 en eng PANGAEA https://cran.r-project.org/web/packages/seacarb/index.html https://dx.doi.org/10.1016/j.gca.2021.09.025 https://cran.r-project.org/web/packages/seacarb/index.html Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 Acid-base regulation Biomass/Abundance/Elemental composition Bottles or small containers/Aquaria <20 L Calcidiscus leptoporus Calcification/Dissolution Chromista Emiliania huxleyi Growth/Morphology Haptophyta Laboratory experiment Laboratory strains Not applicable Other studied parameter or process Pelagos Phytoplankton Pleurochrysis carterae Primary production/Photosynthesis Single species Type Species Registration number of species Uniform resource locator/link to reference Identification pH pH, standard deviation Growth rate Growth rate, standard deviation Carbon, organic, particulate, per cell Carbon, organic, particulate, standard deviation Carbon, inorganic, particulate, per cell Particulate inorganic carbon per cell, standard deviation Carbon, organic, particulate, production per cell Carbon, inorganic, particulate, production per cell Particulate inorganic carbon/particulate organic carbon ratio Particulate inorganic carbon/particulate organic carbon ratio, standard deviation δ13C, particulate organic carbon δ13C, particulate organic carbon, standard deviation δ13C, particulate inorganic carbon δ13C, particulate inorganic carbon, standard deviation δ13C, dissolved inorganic carbon δ13C, dissolved inorganic carbon, standard deviation Difference δ13C, particulate organic carbon and dissolved inorganic carbon Difference δ13C, particulate organic carbon and dissolved inorganic carbon, standard deviation Difference δ13C, particulate inorganic carbon and dissolved inorganic carbon Difference δ13C, particulate inorganic carbon and dissolved inorganic carbon, standard deviation δ11B δ11B, standard deviation Calcifying fluid, pH Calcifying fluid, pH, standard deviation pH, difference dataset Dataset 2021 ftdatacite https://doi.org/10.1594/pangaea.94327410.1016/j.gca.2021.09.025 2024-06-17T10:47:13Z Ocean acidification (OA) appears to have diverse impacts on calcareous coccolithophores, but the cellular processes underlying these responses are not well understood. Here we use stable boron and carbon isotopes, B/Ca ratios, as well as inorganic and organic carbon production rates to investigate the carbon utilization and the internal pH regulation at the site of calcification in Emiliania huxleyi, Pleurochrysis carterae and Calcidiscus leptoporus cultured over a wide pCO2 range (180 to 1000 μatm). Despite large variability, the geochemistry data indicate species-specific modes of pH control and differences in the utilization of inorganic carbon. Boron isotope data suggest that all three species generally upregulate the pH of the calcification fluid (pHCF) compared to surrounding seawater, which coincides with relatively constant growth rates and cellular ratios of inorganic to organic carbon. Furthermore, species exhibit different strategies in regulating their pHCF, i.e., two species maintain homeostasis ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2021) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2022-04-13. ... Dataset Ocean acidification DataCite
institution Open Polar
collection DataCite
op_collection_id ftdatacite
language English
topic Acid-base regulation
Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria <20 L
Calcidiscus leptoporus
Calcification/Dissolution
Chromista
Emiliania huxleyi
Growth/Morphology
Haptophyta
Laboratory experiment
Laboratory strains
Not applicable
Other studied parameter or process
Pelagos
Phytoplankton
Pleurochrysis carterae
Primary production/Photosynthesis
Single species
Type
Species
Registration number of species
Uniform resource locator/link to reference
Identification
pH
pH, standard deviation
Growth rate
Growth rate, standard deviation
Carbon, organic, particulate, per cell
Carbon, organic, particulate, standard deviation
Carbon, inorganic, particulate, per cell
Particulate inorganic carbon per cell, standard deviation
Carbon, organic, particulate, production per cell
Carbon, inorganic, particulate, production per cell
Particulate inorganic carbon/particulate organic carbon ratio
Particulate inorganic carbon/particulate organic carbon ratio, standard deviation
δ13C, particulate organic carbon
δ13C, particulate organic carbon, standard deviation
δ13C, particulate inorganic carbon
δ13C, particulate inorganic carbon, standard deviation
δ13C, dissolved inorganic carbon
δ13C, dissolved inorganic carbon, standard deviation
Difference δ13C, particulate organic carbon and dissolved inorganic carbon
Difference δ13C, particulate organic carbon and dissolved inorganic carbon, standard deviation
Difference δ13C, particulate inorganic carbon and dissolved inorganic carbon
Difference δ13C, particulate inorganic carbon and dissolved inorganic carbon, standard deviation
δ11B
δ11B, standard deviation
Calcifying fluid, pH
Calcifying fluid, pH, standard deviation
pH, difference
spellingShingle Acid-base regulation
Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria <20 L
Calcidiscus leptoporus
Calcification/Dissolution
Chromista
Emiliania huxleyi
Growth/Morphology
Haptophyta
Laboratory experiment
Laboratory strains
Not applicable
Other studied parameter or process
Pelagos
Phytoplankton
Pleurochrysis carterae
Primary production/Photosynthesis
Single species
Type
Species
Registration number of species
Uniform resource locator/link to reference
Identification
pH
pH, standard deviation
Growth rate
Growth rate, standard deviation
Carbon, organic, particulate, per cell
Carbon, organic, particulate, standard deviation
Carbon, inorganic, particulate, per cell
Particulate inorganic carbon per cell, standard deviation
Carbon, organic, particulate, production per cell
Carbon, inorganic, particulate, production per cell
Particulate inorganic carbon/particulate organic carbon ratio
Particulate inorganic carbon/particulate organic carbon ratio, standard deviation
δ13C, particulate organic carbon
δ13C, particulate organic carbon, standard deviation
δ13C, particulate inorganic carbon
δ13C, particulate inorganic carbon, standard deviation
δ13C, dissolved inorganic carbon
δ13C, dissolved inorganic carbon, standard deviation
Difference δ13C, particulate organic carbon and dissolved inorganic carbon
Difference δ13C, particulate organic carbon and dissolved inorganic carbon, standard deviation
Difference δ13C, particulate inorganic carbon and dissolved inorganic carbon
Difference δ13C, particulate inorganic carbon and dissolved inorganic carbon, standard deviation
δ11B
δ11B, standard deviation
Calcifying fluid, pH
Calcifying fluid, pH, standard deviation
pH, difference
Liu, Yiwei
Rokitta, Sebastian D
Rost, Björn
Eagle, Robert A
Seawater carbonate chemistry and growth rates, carbon utilization and the internal pH regulation at the site of calcification in Emiliania huxleyi, Calcidiscus leptoporus and Pleurochrysis ...
topic_facet Acid-base regulation
Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria <20 L
Calcidiscus leptoporus
Calcification/Dissolution
Chromista
Emiliania huxleyi
Growth/Morphology
Haptophyta
Laboratory experiment
Laboratory strains
Not applicable
Other studied parameter or process
Pelagos
Phytoplankton
Pleurochrysis carterae
Primary production/Photosynthesis
Single species
Type
Species
Registration number of species
Uniform resource locator/link to reference
Identification
pH
pH, standard deviation
Growth rate
Growth rate, standard deviation
Carbon, organic, particulate, per cell
Carbon, organic, particulate, standard deviation
Carbon, inorganic, particulate, per cell
Particulate inorganic carbon per cell, standard deviation
Carbon, organic, particulate, production per cell
Carbon, inorganic, particulate, production per cell
Particulate inorganic carbon/particulate organic carbon ratio
Particulate inorganic carbon/particulate organic carbon ratio, standard deviation
δ13C, particulate organic carbon
δ13C, particulate organic carbon, standard deviation
δ13C, particulate inorganic carbon
δ13C, particulate inorganic carbon, standard deviation
δ13C, dissolved inorganic carbon
δ13C, dissolved inorganic carbon, standard deviation
Difference δ13C, particulate organic carbon and dissolved inorganic carbon
Difference δ13C, particulate organic carbon and dissolved inorganic carbon, standard deviation
Difference δ13C, particulate inorganic carbon and dissolved inorganic carbon
Difference δ13C, particulate inorganic carbon and dissolved inorganic carbon, standard deviation
δ11B
δ11B, standard deviation
Calcifying fluid, pH
Calcifying fluid, pH, standard deviation
pH, difference
description Ocean acidification (OA) appears to have diverse impacts on calcareous coccolithophores, but the cellular processes underlying these responses are not well understood. Here we use stable boron and carbon isotopes, B/Ca ratios, as well as inorganic and organic carbon production rates to investigate the carbon utilization and the internal pH regulation at the site of calcification in Emiliania huxleyi, Pleurochrysis carterae and Calcidiscus leptoporus cultured over a wide pCO2 range (180 to 1000 μatm). Despite large variability, the geochemistry data indicate species-specific modes of pH control and differences in the utilization of inorganic carbon. Boron isotope data suggest that all three species generally upregulate the pH of the calcification fluid (pHCF) compared to surrounding seawater, which coincides with relatively constant growth rates and cellular ratios of inorganic to organic carbon. Furthermore, species exhibit different strategies in regulating their pHCF, i.e., two species maintain homeostasis ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2021) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2022-04-13. ...
format Dataset
author Liu, Yiwei
Rokitta, Sebastian D
Rost, Björn
Eagle, Robert A
author_facet Liu, Yiwei
Rokitta, Sebastian D
Rost, Björn
Eagle, Robert A
author_sort Liu, Yiwei
title Seawater carbonate chemistry and growth rates, carbon utilization and the internal pH regulation at the site of calcification in Emiliania huxleyi, Calcidiscus leptoporus and Pleurochrysis ...
title_short Seawater carbonate chemistry and growth rates, carbon utilization and the internal pH regulation at the site of calcification in Emiliania huxleyi, Calcidiscus leptoporus and Pleurochrysis ...
title_full Seawater carbonate chemistry and growth rates, carbon utilization and the internal pH regulation at the site of calcification in Emiliania huxleyi, Calcidiscus leptoporus and Pleurochrysis ...
title_fullStr Seawater carbonate chemistry and growth rates, carbon utilization and the internal pH regulation at the site of calcification in Emiliania huxleyi, Calcidiscus leptoporus and Pleurochrysis ...
title_full_unstemmed Seawater carbonate chemistry and growth rates, carbon utilization and the internal pH regulation at the site of calcification in Emiliania huxleyi, Calcidiscus leptoporus and Pleurochrysis ...
title_sort seawater carbonate chemistry and growth rates, carbon utilization and the internal ph regulation at the site of calcification in emiliania huxleyi, calcidiscus leptoporus and pleurochrysis ...
publisher PANGAEA
publishDate 2021
url https://dx.doi.org/10.1594/pangaea.943274
https://doi.pangaea.de/10.1594/PANGAEA.943274
genre Ocean acidification
genre_facet Ocean acidification
op_relation https://cran.r-project.org/web/packages/seacarb/index.html
https://dx.doi.org/10.1016/j.gca.2021.09.025
https://cran.r-project.org/web/packages/seacarb/index.html
op_rights Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
cc-by-4.0
op_doi https://doi.org/10.1594/pangaea.94327410.1016/j.gca.2021.09.025
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