Seawater carbonate chemistry and specific growth rate, respiration rate, net photosynthetic rate and photochemical parameters of Phaeodactylum tricornutum ...

Experimentally elevated pCO2 and the associated pH drop are known to differentially affect many aspects of the physiology of diatoms under different environmental conditions or in different regions. However, contrasting responses to elevated pCO2 in the dark and light periods of a diel cycle have no...

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Bibliographic Details
Main Authors: Qu, Liming, Beardall, John, Jiang, Xiaowen, Gao, Kunshan
Format: Dataset
Language:English
Published: PANGAEA 2021
Subjects:
pH
Online Access:https://dx.doi.org/10.1594/pangaea.939406
https://doi.pangaea.de/10.1594/PANGAEA.939406
id ftdatacite:10.1594/pangaea.939406
record_format openpolar
spelling ftdatacite:10.1594/pangaea.939406 2024-04-28T08:34:50+00:00 Seawater carbonate chemistry and specific growth rate, respiration rate, net photosynthetic rate and photochemical parameters of Phaeodactylum tricornutum ... Qu, Liming Beardall, John Jiang, Xiaowen Gao, Kunshan 2021 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.939406 https://doi.pangaea.de/10.1594/PANGAEA.939406 en eng PANGAEA https://cran.r-project.org/web/packages/seacarb/index.html https://dx.doi.org/10.1002/lno.11903 https://cran.r-project.org/web/packages/seacarb/index.html Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 Bottles or small containers/Aquaria <20 L Chromista Growth/Morphology Laboratory experiment Laboratory strains Light Not applicable Ochrophyta Pelagos Phaeodactylum tricornutum Phytoplankton Primary production/Photosynthesis Respiration Single species Type Species Registration number of species Uniform resource locator/link to reference Treatment Light mode Growth rate Cell, diameter Cell, diameter, standard deviation Respiration rate, oxygen, per cell Respiration rate, oxygen, standard deviation Ratio Ratio, standard deviation Net photosynthesis rate, oxygen, per cell Net photosynthesis rate, standard deviation Chlorophyll a per cell Chlorophyll a, standard deviation Carotenoids per cell Carotenoids, standard deviation Carotenoids/Chlorophyll a ratio Carotenoids/Chlorophyll a ratio, standard deviation Maximum quantum yield of photosystem II Maximum quantum yield of photosystem II, standard deviation Effective photochemical quantum yield Effective photochemical quantum yield, standard deviation Electron transport rate, relative Time in hours Salinity Temperature, water pH pH, standard deviation Alkalinity, total Alkalinity, total, standard deviation Carbon, inorganic, dissolved Carbon, inorganic, dissolved, standard deviation Bicarbonate ion dataset Dataset 2021 ftdatacite https://doi.org/10.1594/pangaea.93940610.1002/lno.11903 2024-04-02T11:36:31Z Experimentally elevated pCO2 and the associated pH drop are known to differentially affect many aspects of the physiology of diatoms under different environmental conditions or in different regions. However, contrasting responses to elevated pCO2 in the dark and light periods of a diel cycle have not been documented. By growing the model diatom Phaeodactylum tricornutum under 3 light levels and 2 different CO2 concentrations, we found that the elevated pCO2/pH drop projected for future ocean acidification reduced the diatom's growth rate by 8–25% during the night period but increased it by up to 9–21% in the light period, resulting in insignificant changes in growth over the diel cycle under the three different light levels. The elevated pCO2 increased the respiration rates irrespective of growth light levels and light or dark periods and enhanced its photosynthetic performance during daytime. With prolonged exposure to complete darkness, simulating the sinking process in the dark zones of the ocean, the ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2021) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2021-12-15. ... Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology)
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Bottles or small containers/Aquaria <20 L
Chromista
Growth/Morphology
Laboratory experiment
Laboratory strains
Light
Not applicable
Ochrophyta
Pelagos
Phaeodactylum tricornutum
Phytoplankton
Primary production/Photosynthesis
Respiration
Single species
Type
Species
Registration number of species
Uniform resource locator/link to reference
Treatment
Light mode
Growth rate
Cell, diameter
Cell, diameter, standard deviation
Respiration rate, oxygen, per cell
Respiration rate, oxygen, standard deviation
Ratio
Ratio, standard deviation
Net photosynthesis rate, oxygen, per cell
Net photosynthesis rate, standard deviation
Chlorophyll a per cell
Chlorophyll a, standard deviation
Carotenoids per cell
Carotenoids, standard deviation
Carotenoids/Chlorophyll a ratio
Carotenoids/Chlorophyll a ratio, standard deviation
Maximum quantum yield of photosystem II
Maximum quantum yield of photosystem II, standard deviation
Effective photochemical quantum yield
Effective photochemical quantum yield, standard deviation
Electron transport rate, relative
Time in hours
Salinity
Temperature, water
pH
pH, standard deviation
Alkalinity, total
Alkalinity, total, standard deviation
Carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard deviation
Bicarbonate ion
spellingShingle Bottles or small containers/Aquaria <20 L
Chromista
Growth/Morphology
Laboratory experiment
Laboratory strains
Light
Not applicable
Ochrophyta
Pelagos
Phaeodactylum tricornutum
Phytoplankton
Primary production/Photosynthesis
Respiration
Single species
Type
Species
Registration number of species
Uniform resource locator/link to reference
Treatment
Light mode
Growth rate
Cell, diameter
Cell, diameter, standard deviation
Respiration rate, oxygen, per cell
Respiration rate, oxygen, standard deviation
Ratio
Ratio, standard deviation
Net photosynthesis rate, oxygen, per cell
Net photosynthesis rate, standard deviation
Chlorophyll a per cell
Chlorophyll a, standard deviation
Carotenoids per cell
Carotenoids, standard deviation
Carotenoids/Chlorophyll a ratio
Carotenoids/Chlorophyll a ratio, standard deviation
Maximum quantum yield of photosystem II
Maximum quantum yield of photosystem II, standard deviation
Effective photochemical quantum yield
Effective photochemical quantum yield, standard deviation
Electron transport rate, relative
Time in hours
Salinity
Temperature, water
pH
pH, standard deviation
Alkalinity, total
Alkalinity, total, standard deviation
Carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard deviation
Bicarbonate ion
Qu, Liming
Beardall, John
Jiang, Xiaowen
Gao, Kunshan
Seawater carbonate chemistry and specific growth rate, respiration rate, net photosynthetic rate and photochemical parameters of Phaeodactylum tricornutum ...
topic_facet Bottles or small containers/Aquaria <20 L
Chromista
Growth/Morphology
Laboratory experiment
Laboratory strains
Light
Not applicable
Ochrophyta
Pelagos
Phaeodactylum tricornutum
Phytoplankton
Primary production/Photosynthesis
Respiration
Single species
Type
Species
Registration number of species
Uniform resource locator/link to reference
Treatment
Light mode
Growth rate
Cell, diameter
Cell, diameter, standard deviation
Respiration rate, oxygen, per cell
Respiration rate, oxygen, standard deviation
Ratio
Ratio, standard deviation
Net photosynthesis rate, oxygen, per cell
Net photosynthesis rate, standard deviation
Chlorophyll a per cell
Chlorophyll a, standard deviation
Carotenoids per cell
Carotenoids, standard deviation
Carotenoids/Chlorophyll a ratio
Carotenoids/Chlorophyll a ratio, standard deviation
Maximum quantum yield of photosystem II
Maximum quantum yield of photosystem II, standard deviation
Effective photochemical quantum yield
Effective photochemical quantum yield, standard deviation
Electron transport rate, relative
Time in hours
Salinity
Temperature, water
pH
pH, standard deviation
Alkalinity, total
Alkalinity, total, standard deviation
Carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard deviation
Bicarbonate ion
description Experimentally elevated pCO2 and the associated pH drop are known to differentially affect many aspects of the physiology of diatoms under different environmental conditions or in different regions. However, contrasting responses to elevated pCO2 in the dark and light periods of a diel cycle have not been documented. By growing the model diatom Phaeodactylum tricornutum under 3 light levels and 2 different CO2 concentrations, we found that the elevated pCO2/pH drop projected for future ocean acidification reduced the diatom's growth rate by 8–25% during the night period but increased it by up to 9–21% in the light period, resulting in insignificant changes in growth over the diel cycle under the three different light levels. The elevated pCO2 increased the respiration rates irrespective of growth light levels and light or dark periods and enhanced its photosynthetic performance during daytime. With prolonged exposure to complete darkness, simulating the sinking process in the dark zones of the ocean, the ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2021) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2021-12-15. ...
format Dataset
author Qu, Liming
Beardall, John
Jiang, Xiaowen
Gao, Kunshan
author_facet Qu, Liming
Beardall, John
Jiang, Xiaowen
Gao, Kunshan
author_sort Qu, Liming
title Seawater carbonate chemistry and specific growth rate, respiration rate, net photosynthetic rate and photochemical parameters of Phaeodactylum tricornutum ...
title_short Seawater carbonate chemistry and specific growth rate, respiration rate, net photosynthetic rate and photochemical parameters of Phaeodactylum tricornutum ...
title_full Seawater carbonate chemistry and specific growth rate, respiration rate, net photosynthetic rate and photochemical parameters of Phaeodactylum tricornutum ...
title_fullStr Seawater carbonate chemistry and specific growth rate, respiration rate, net photosynthetic rate and photochemical parameters of Phaeodactylum tricornutum ...
title_full_unstemmed Seawater carbonate chemistry and specific growth rate, respiration rate, net photosynthetic rate and photochemical parameters of Phaeodactylum tricornutum ...
title_sort seawater carbonate chemistry and specific growth rate, respiration rate, net photosynthetic rate and photochemical parameters of phaeodactylum tricornutum ...
publisher PANGAEA
publishDate 2021
url https://dx.doi.org/10.1594/pangaea.939406
https://doi.pangaea.de/10.1594/PANGAEA.939406
genre Ocean acidification
genre_facet Ocean acidification
op_relation https://cran.r-project.org/web/packages/seacarb/index.html
https://dx.doi.org/10.1002/lno.11903
https://cran.r-project.org/web/packages/seacarb/index.html
op_rights Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
cc-by-4.0
op_doi https://doi.org/10.1594/pangaea.93940610.1002/lno.11903
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