Seawater carbonate chemistry and counts for foram propagule community

Ocean chemistry is changing as a result of human activities. Atmospheric carbon dioxide (CO2) concentrations are increasing, causing an increase in oceanic pCO2 that drives a decrease in oceanic pH, a process called ocean acidification (OA). Higher CO2 concentrations are also linked to rising global...

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Main Authors: Bernhard, Joan M, Wit, Johannes C, Starczak, V R, Beaudoin, David J, Phalen, William G, McCorkle, Daniel C
Format: Dataset
Language:English
Published: PANGAEA - Data Publisher for Earth & Environmental Science 2021
Subjects:
pH
Online Access:https://dx.doi.org/10.1594/pangaea.932793
https://doi.pangaea.de/10.1594/PANGAEA.932793
id ftdatacite:10.1594/pangaea.932793
record_format openpolar
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Benthos
Bottles or small containers/Aquaria <20 L
Coast and continental shelf
Community composition and diversity
Entire community
Laboratory experiment
North Atlantic
Oxygen
Soft-bottom community
Temperate
Temperature
Type
Treatment
Oxygen, dissolved
Partial pressure of carbon dioxide water at sea surface temperature wet air
Temperature, water
Sample ID
Replicate
Species
Specimen count
Salinity
Alkalinity, total
Alkalinity, total, standard deviation
Carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard deviation
pH
pH, standard deviation
Carbonate ion
Carbonate ion, standard deviation
Calcite saturation state
Calcite saturation state, standard deviation
Partial pressure of carbon dioxide, standard deviation
Species richness
Shannon Diversity Index
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Aragonite saturation state
Experiment
Potentiometric titration
Manometric
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
spellingShingle Benthos
Bottles or small containers/Aquaria <20 L
Coast and continental shelf
Community composition and diversity
Entire community
Laboratory experiment
North Atlantic
Oxygen
Soft-bottom community
Temperate
Temperature
Type
Treatment
Oxygen, dissolved
Partial pressure of carbon dioxide water at sea surface temperature wet air
Temperature, water
Sample ID
Replicate
Species
Specimen count
Salinity
Alkalinity, total
Alkalinity, total, standard deviation
Carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard deviation
pH
pH, standard deviation
Carbonate ion
Carbonate ion, standard deviation
Calcite saturation state
Calcite saturation state, standard deviation
Partial pressure of carbon dioxide, standard deviation
Species richness
Shannon Diversity Index
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Aragonite saturation state
Experiment
Potentiometric titration
Manometric
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
Bernhard, Joan M
Wit, Johannes C
Starczak, V R
Beaudoin, David J
Phalen, William G
McCorkle, Daniel C
Seawater carbonate chemistry and counts for foram propagule community
topic_facet Benthos
Bottles or small containers/Aquaria <20 L
Coast and continental shelf
Community composition and diversity
Entire community
Laboratory experiment
North Atlantic
Oxygen
Soft-bottom community
Temperate
Temperature
Type
Treatment
Oxygen, dissolved
Partial pressure of carbon dioxide water at sea surface temperature wet air
Temperature, water
Sample ID
Replicate
Species
Specimen count
Salinity
Alkalinity, total
Alkalinity, total, standard deviation
Carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard deviation
pH
pH, standard deviation
Carbonate ion
Carbonate ion, standard deviation
Calcite saturation state
Calcite saturation state, standard deviation
Partial pressure of carbon dioxide, standard deviation
Species richness
Shannon Diversity Index
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Aragonite saturation state
Experiment
Potentiometric titration
Manometric
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
description Ocean chemistry is changing as a result of human activities. Atmospheric carbon dioxide (CO2) concentrations are increasing, causing an increase in oceanic pCO2 that drives a decrease in oceanic pH, a process called ocean acidification (OA). Higher CO2 concentrations are also linked to rising global temperatures that can result in more stratified surface waters, reducing the exchange between surface and deep waters; this stronger stratification, along with nutrient pollution, contributes to an expansion of oxygen-depleted zones (so called hypoxia or deoxygenation). Determining the response of marine organisms to environmental changes is important for assessments of future ecosystem functioning. While many studies have assessed the impact of individual or paired stressors, fewer studies have assessed the combined impact of pCO2, O2, and temperature. A long-term experiment (10 months) with different treatments of these three stressors was conducted to determine their sole or combined impact on the abundance and survival of a benthic foraminiferal community collected from a continental-shelf site. Foraminifera are well suited to such study because of their small size, relatively rapid growth, varied mineralogies and physiologies. Inoculation materials were collected from a 77-m deep site south of Woods Hole, MA. Very fine sediments (<53 μm) were used as inoculum, to allow the entire community to respond. Thirty-eight morphologically identified taxa grew during the experiment. Multivariate statistical analysis indicates that hypoxia was the major driving factor distinguishing the yields, while warming was secondary. Species responses were not consistent, with different species being most abundant in different treatments. Some taxa grew in all of the triple-stressor samples. Results from the experiment suggest that foraminiferal species' responses will vary considerably, with some being negatively impacted by predicted environmental changes, while other taxa will tolerate, and perhaps even benefit, from deoxygenation, warming and OA. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2021) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2021-06-17.
format Dataset
author Bernhard, Joan M
Wit, Johannes C
Starczak, V R
Beaudoin, David J
Phalen, William G
McCorkle, Daniel C
author_facet Bernhard, Joan M
Wit, Johannes C
Starczak, V R
Beaudoin, David J
Phalen, William G
McCorkle, Daniel C
author_sort Bernhard, Joan M
title Seawater carbonate chemistry and counts for foram propagule community
title_short Seawater carbonate chemistry and counts for foram propagule community
title_full Seawater carbonate chemistry and counts for foram propagule community
title_fullStr Seawater carbonate chemistry and counts for foram propagule community
title_full_unstemmed Seawater carbonate chemistry and counts for foram propagule community
title_sort seawater carbonate chemistry and counts for foram propagule community
publisher PANGAEA - Data Publisher for Earth & Environmental Science
publishDate 2021
url https://dx.doi.org/10.1594/pangaea.932793
https://doi.pangaea.de/10.1594/PANGAEA.932793
genre North Atlantic
Ocean acidification
genre_facet North Atlantic
Ocean acidification
op_relation https://www.bco-dmo.org/dataset/670613
https://cran.r-project.org/web/packages/seacarb/index.html
https://dx.doi.org/10.3389/fmars.2021.643339
https://www.bco-dmo.org/dataset/670613
https://cran.r-project.org/web/packages/seacarb/index.html
op_rights Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
cc-by-4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.1594/pangaea.932793
https://doi.org/10.3389/fmars.2021.643339
_version_ 1766137277697753088
spelling ftdatacite:10.1594/pangaea.932793 2023-05-15T17:37:22+02:00 Seawater carbonate chemistry and counts for foram propagule community Bernhard, Joan M Wit, Johannes C Starczak, V R Beaudoin, David J Phalen, William G McCorkle, Daniel C 2021 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.932793 https://doi.pangaea.de/10.1594/PANGAEA.932793 en eng PANGAEA - Data Publisher for Earth & Environmental Science https://www.bco-dmo.org/dataset/670613 https://cran.r-project.org/web/packages/seacarb/index.html https://dx.doi.org/10.3389/fmars.2021.643339 https://www.bco-dmo.org/dataset/670613 https://cran.r-project.org/web/packages/seacarb/index.html Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 CC-BY Benthos Bottles or small containers/Aquaria <20 L Coast and continental shelf Community composition and diversity Entire community Laboratory experiment North Atlantic Oxygen Soft-bottom community Temperate Temperature Type Treatment Oxygen, dissolved Partial pressure of carbon dioxide water at sea surface temperature wet air Temperature, water Sample ID Replicate Species Specimen count Salinity Alkalinity, total Alkalinity, total, standard deviation Carbon, inorganic, dissolved Carbon, inorganic, dissolved, standard deviation pH pH, standard deviation Carbonate ion Carbonate ion, standard deviation Calcite saturation state Calcite saturation state, standard deviation Partial pressure of carbon dioxide, standard deviation Species richness Shannon Diversity Index Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Aragonite saturation state Experiment Potentiometric titration Manometric Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC dataset Dataset 2021 ftdatacite https://doi.org/10.1594/pangaea.932793 https://doi.org/10.3389/fmars.2021.643339 2021-11-05T12:55:41Z Ocean chemistry is changing as a result of human activities. Atmospheric carbon dioxide (CO2) concentrations are increasing, causing an increase in oceanic pCO2 that drives a decrease in oceanic pH, a process called ocean acidification (OA). Higher CO2 concentrations are also linked to rising global temperatures that can result in more stratified surface waters, reducing the exchange between surface and deep waters; this stronger stratification, along with nutrient pollution, contributes to an expansion of oxygen-depleted zones (so called hypoxia or deoxygenation). Determining the response of marine organisms to environmental changes is important for assessments of future ecosystem functioning. While many studies have assessed the impact of individual or paired stressors, fewer studies have assessed the combined impact of pCO2, O2, and temperature. A long-term experiment (10 months) with different treatments of these three stressors was conducted to determine their sole or combined impact on the abundance and survival of a benthic foraminiferal community collected from a continental-shelf site. Foraminifera are well suited to such study because of their small size, relatively rapid growth, varied mineralogies and physiologies. Inoculation materials were collected from a 77-m deep site south of Woods Hole, MA. Very fine sediments (<53 μm) were used as inoculum, to allow the entire community to respond. Thirty-eight morphologically identified taxa grew during the experiment. Multivariate statistical analysis indicates that hypoxia was the major driving factor distinguishing the yields, while warming was secondary. Species responses were not consistent, with different species being most abundant in different treatments. Some taxa grew in all of the triple-stressor samples. Results from the experiment suggest that foraminiferal species' responses will vary considerably, with some being negatively impacted by predicted environmental changes, while other taxa will tolerate, and perhaps even benefit, from deoxygenation, warming and OA. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2021) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2021-06-17. Dataset North Atlantic Ocean acidification DataCite Metadata Store (German National Library of Science and Technology)