Benthic community structure in surface sediments from Isfjorden, Svalbard ...

Bibliographic Details
Main Authors: Knittel, Katrin, Miksch, Sebastian, Wegener, Gunter, Meiners, Mirja
Format: Dataset
Language:English
Published: PANGAEA 2021
Subjects:
TOC
Online Access:https://dx.doi.org/10.1594/pangaea.930472
https://doi.pangaea.de/10.1594/PANGAEA.930472
id ftdatacite:10.1594/pangaea.930472
record_format openpolar
spelling ftdatacite:10.1594/pangaea.930472 2024-06-09T07:44:10+00:00 Benthic community structure in surface sediments from Isfjorden, Svalbard ... Knittel, Katrin Miksch, Sebastian Wegener, Gunter Meiners, Mirja 2021 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.930472 https://doi.pangaea.de/10.1594/PANGAEA.930472 en eng PANGAEA https://dx.doi.org/10.1594/pangaea.930483 https://dx.doi.org/10.1038/s43705-021-00028-w Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 Arctic bacterial community composition CARD-FISH marine sediment Svalbard TOC Event label Latitude of event Longitude of event Sample code/label DATE/TIME DEPTH, sediment/rock Depth, top/min Depth, bottom/max Temperature, in rock/sediment ELEVATION DEPTH, water Salinity, absolute Chlorophyll a Carbon, organic, total Carbon, total Nitrogen, organic, total Nitrogen, total Prokaryotes, cell abundance Bacteria, cell abundance, targeted by oligonucleotide FISH probe EUB338-I-III Gammaproteobacteria, cell abundance, targeted by oligonucleotide FISH probe GAM42a Bacteroidota, cell abundance, targeted by oligonucleotide FISH probe CF319a Verrucomicrobiota, cell abundance, targeted by oligonucleotide FISH probe EUB338-III Desulfobacterota, cell abundance, targeted by oligonucleotide FISH probe DELTA495a-c Planctomycetota, cell abundance, targeted by oligonucleotide FISH probe PLA46 Desulfobacterota of the Desulfosarcina/Desulfococcus branch cell abundance, targeted by oligonucleotide FISH probe DSS658 Actinomarinales, cell abundance, targeted by oligonucleotide FISH probe ACM1218 Microtrichales, cell abundance, targeted by oligonucleotide FISH probe MIT1218 Accession number, genetics Inverse Simpson index of diversity Shannon Diversity Index van Veen Grab Cyclops-7, submersible sensor, Turner Designs, San Jose, USA Epifluorescence microscopy after DAPI staining Catalyzed reporter deposition-fluorescence in situ hybridization CARD-FISH Sequence read archive; bacteria Calculated from DADA2 analysis Dataset dataset 2021 ftdatacite https://doi.org/10.1594/pangaea.93047210.1594/pangaea.93048310.1038/s43705-021-00028-w 2024-05-13T11:38:56Z Dataset Arctic Isfjord* Isfjorden Svalbard DataCite Metadata Store (German National Library of Science and Technology) Arctic San Jose ENVELOPE(-58.067,-58.067,-63.917,-63.917) Svalbard Van Veen ENVELOPE(161.900,161.900,-71.583,-71.583)
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Arctic
bacterial community composition
CARD-FISH
marine sediment
Svalbard
TOC
Event label
Latitude of event
Longitude of event
Sample code/label
DATE/TIME
DEPTH, sediment/rock
Depth, top/min
Depth, bottom/max
Temperature, in rock/sediment
ELEVATION
DEPTH, water
Salinity, absolute
Chlorophyll a
Carbon, organic, total
Carbon, total
Nitrogen, organic, total
Nitrogen, total
Prokaryotes, cell abundance
Bacteria, cell abundance, targeted by oligonucleotide FISH probe EUB338-I-III
Gammaproteobacteria, cell abundance, targeted by oligonucleotide FISH probe GAM42a
Bacteroidota, cell abundance, targeted by oligonucleotide FISH probe CF319a
Verrucomicrobiota, cell abundance, targeted by oligonucleotide FISH probe EUB338-III
Desulfobacterota, cell abundance, targeted by oligonucleotide FISH probe DELTA495a-c
Planctomycetota, cell abundance, targeted by oligonucleotide FISH probe PLA46
Desulfobacterota of the Desulfosarcina/Desulfococcus branch cell abundance, targeted by oligonucleotide FISH probe DSS658
Actinomarinales, cell abundance, targeted by oligonucleotide FISH probe ACM1218
Microtrichales, cell abundance, targeted by oligonucleotide FISH probe MIT1218
Accession number, genetics
Inverse Simpson index of diversity
Shannon Diversity Index
van Veen Grab
Cyclops-7, submersible sensor, Turner Designs, San Jose, USA
Epifluorescence microscopy after DAPI staining
Catalyzed reporter deposition-fluorescence in situ hybridization CARD-FISH
Sequence read archive; bacteria
Calculated from DADA2 analysis
spellingShingle Arctic
bacterial community composition
CARD-FISH
marine sediment
Svalbard
TOC
Event label
Latitude of event
Longitude of event
Sample code/label
DATE/TIME
DEPTH, sediment/rock
Depth, top/min
Depth, bottom/max
Temperature, in rock/sediment
ELEVATION
DEPTH, water
Salinity, absolute
Chlorophyll a
Carbon, organic, total
Carbon, total
Nitrogen, organic, total
Nitrogen, total
Prokaryotes, cell abundance
Bacteria, cell abundance, targeted by oligonucleotide FISH probe EUB338-I-III
Gammaproteobacteria, cell abundance, targeted by oligonucleotide FISH probe GAM42a
Bacteroidota, cell abundance, targeted by oligonucleotide FISH probe CF319a
Verrucomicrobiota, cell abundance, targeted by oligonucleotide FISH probe EUB338-III
Desulfobacterota, cell abundance, targeted by oligonucleotide FISH probe DELTA495a-c
Planctomycetota, cell abundance, targeted by oligonucleotide FISH probe PLA46
Desulfobacterota of the Desulfosarcina/Desulfococcus branch cell abundance, targeted by oligonucleotide FISH probe DSS658
Actinomarinales, cell abundance, targeted by oligonucleotide FISH probe ACM1218
Microtrichales, cell abundance, targeted by oligonucleotide FISH probe MIT1218
Accession number, genetics
Inverse Simpson index of diversity
Shannon Diversity Index
van Veen Grab
Cyclops-7, submersible sensor, Turner Designs, San Jose, USA
Epifluorescence microscopy after DAPI staining
Catalyzed reporter deposition-fluorescence in situ hybridization CARD-FISH
Sequence read archive; bacteria
Calculated from DADA2 analysis
Knittel, Katrin
Miksch, Sebastian
Wegener, Gunter
Meiners, Mirja
Benthic community structure in surface sediments from Isfjorden, Svalbard ...
topic_facet Arctic
bacterial community composition
CARD-FISH
marine sediment
Svalbard
TOC
Event label
Latitude of event
Longitude of event
Sample code/label
DATE/TIME
DEPTH, sediment/rock
Depth, top/min
Depth, bottom/max
Temperature, in rock/sediment
ELEVATION
DEPTH, water
Salinity, absolute
Chlorophyll a
Carbon, organic, total
Carbon, total
Nitrogen, organic, total
Nitrogen, total
Prokaryotes, cell abundance
Bacteria, cell abundance, targeted by oligonucleotide FISH probe EUB338-I-III
Gammaproteobacteria, cell abundance, targeted by oligonucleotide FISH probe GAM42a
Bacteroidota, cell abundance, targeted by oligonucleotide FISH probe CF319a
Verrucomicrobiota, cell abundance, targeted by oligonucleotide FISH probe EUB338-III
Desulfobacterota, cell abundance, targeted by oligonucleotide FISH probe DELTA495a-c
Planctomycetota, cell abundance, targeted by oligonucleotide FISH probe PLA46
Desulfobacterota of the Desulfosarcina/Desulfococcus branch cell abundance, targeted by oligonucleotide FISH probe DSS658
Actinomarinales, cell abundance, targeted by oligonucleotide FISH probe ACM1218
Microtrichales, cell abundance, targeted by oligonucleotide FISH probe MIT1218
Accession number, genetics
Inverse Simpson index of diversity
Shannon Diversity Index
van Veen Grab
Cyclops-7, submersible sensor, Turner Designs, San Jose, USA
Epifluorescence microscopy after DAPI staining
Catalyzed reporter deposition-fluorescence in situ hybridization CARD-FISH
Sequence read archive; bacteria
Calculated from DADA2 analysis
format Dataset
author Knittel, Katrin
Miksch, Sebastian
Wegener, Gunter
Meiners, Mirja
author_facet Knittel, Katrin
Miksch, Sebastian
Wegener, Gunter
Meiners, Mirja
author_sort Knittel, Katrin
title Benthic community structure in surface sediments from Isfjorden, Svalbard ...
title_short Benthic community structure in surface sediments from Isfjorden, Svalbard ...
title_full Benthic community structure in surface sediments from Isfjorden, Svalbard ...
title_fullStr Benthic community structure in surface sediments from Isfjorden, Svalbard ...
title_full_unstemmed Benthic community structure in surface sediments from Isfjorden, Svalbard ...
title_sort benthic community structure in surface sediments from isfjorden, svalbard ...
publisher PANGAEA
publishDate 2021
url https://dx.doi.org/10.1594/pangaea.930472
https://doi.pangaea.de/10.1594/PANGAEA.930472
long_lat ENVELOPE(-58.067,-58.067,-63.917,-63.917)
ENVELOPE(161.900,161.900,-71.583,-71.583)
geographic Arctic
San Jose
Svalbard
Van Veen
geographic_facet Arctic
San Jose
Svalbard
Van Veen
genre Arctic
Isfjord*
Isfjorden
Svalbard
genre_facet Arctic
Isfjord*
Isfjorden
Svalbard
op_relation https://dx.doi.org/10.1594/pangaea.930483
https://dx.doi.org/10.1038/s43705-021-00028-w
op_rights Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
cc-by-4.0
op_doi https://doi.org/10.1594/pangaea.93047210.1594/pangaea.93048310.1038/s43705-021-00028-w
_version_ 1801372967180959744