Seawater carbonate chemistry and acid-base physiology, skeleton properties, and metal contamination in two echinoderms

Antarctic surface waters are expected to be the first to experience severe ocean acidification (OA) with carbonate undersaturation and large decreases in pH forecasted before the end of this century. Due to the long stability in environmental conditions and the relatively low daily and seasonal vari...

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Main Authors: Di Giglio, Sarah, Agüera, Antonio, Pernet, Philippe, M'Zoudi, Saloua, Angulo-Preckler, Carlos, Avila, Conxita, Dubois, Philippe
Format: Dataset
Language:English
Published: PANGAEA - Data Publisher for Earth & Environmental Science 2020
Subjects:
pH
Online Access:https://dx.doi.org/10.1594/pangaea.929722
https://doi.pangaea.de/10.1594/PANGAEA.929722
id ftdatacite:10.1594/pangaea.929722
record_format openpolar
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Acid-base regulation
Animalia
Antarctic
Benthic animals
Benthos
CO2 vent
Coast and continental shelf
Echinodermata
Field observation
Growth/Morphology
Odontaster validus
Other metabolic rates
Other studied parameter or process
Polar
Single species
Sterechinus neumayeri
Type
Species
Registration number of species
Uniform resource locator/link to reference
Site
Coelomic fluid, pH
pH, standard deviation
Coelomic fluid, alkalinity
Alkalinity, total, standard deviation
Coelomic fluid, carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard deviation
Coelomic fluid, partial pressure of carbon dioxide
Partial pressure of carbon dioxide, standard deviation
Coelomic fluid, bicarbonate ion
Bicarbonate ion, standard deviation
Coelomic fluid, carbonate ion
Carbonate ion, standard deviation
Coelomic fluid, calcite saturation state
Calcite saturation state, standard deviation
Coelomic fluid, aragonite saturation state
Aragonite saturation state, standard deviation
Arm length
Arm length, standard deviation
Length
Length, standard deviation
Height
Height, standard deviation
Second moment of area
Second moment of area, standard deviation
Characteristic stress
Confidence interval
Weibull modulus
Force
Young's modulus
Cadmium
Cadmium, standard deviation
Copper
Copper, standard deviation
Iron
Iron, standard deviation
Lead
Lead, standard deviation
Zinc
Zinc, standard deviation
Temperature, water
Temperature, water, standard deviation
Salinity
Salinity, standard deviation
pH
Alkalinity, total
Carbon, inorganic, dissolved
Partial pressure of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Calcite saturation state
Aragonite saturation state
Carbonate system computation flag
Carbon dioxide
Carbon dioxide, standard deviation
Fugacity of carbon dioxide water at sea surface temperature wet air
Fugacity of carbon dioxide in seawater, standard deviation
Potentiometric
Potentiometric titration
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. 2010
Calculated using seacarb after Orr et al. 2018
Ocean Acidification International Coordination Centre OA-ICC
spellingShingle Acid-base regulation
Animalia
Antarctic
Benthic animals
Benthos
CO2 vent
Coast and continental shelf
Echinodermata
Field observation
Growth/Morphology
Odontaster validus
Other metabolic rates
Other studied parameter or process
Polar
Single species
Sterechinus neumayeri
Type
Species
Registration number of species
Uniform resource locator/link to reference
Site
Coelomic fluid, pH
pH, standard deviation
Coelomic fluid, alkalinity
Alkalinity, total, standard deviation
Coelomic fluid, carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard deviation
Coelomic fluid, partial pressure of carbon dioxide
Partial pressure of carbon dioxide, standard deviation
Coelomic fluid, bicarbonate ion
Bicarbonate ion, standard deviation
Coelomic fluid, carbonate ion
Carbonate ion, standard deviation
Coelomic fluid, calcite saturation state
Calcite saturation state, standard deviation
Coelomic fluid, aragonite saturation state
Aragonite saturation state, standard deviation
Arm length
Arm length, standard deviation
Length
Length, standard deviation
Height
Height, standard deviation
Second moment of area
Second moment of area, standard deviation
Characteristic stress
Confidence interval
Weibull modulus
Force
Young's modulus
Cadmium
Cadmium, standard deviation
Copper
Copper, standard deviation
Iron
Iron, standard deviation
Lead
Lead, standard deviation
Zinc
Zinc, standard deviation
Temperature, water
Temperature, water, standard deviation
Salinity
Salinity, standard deviation
pH
Alkalinity, total
Carbon, inorganic, dissolved
Partial pressure of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Calcite saturation state
Aragonite saturation state
Carbonate system computation flag
Carbon dioxide
Carbon dioxide, standard deviation
Fugacity of carbon dioxide water at sea surface temperature wet air
Fugacity of carbon dioxide in seawater, standard deviation
Potentiometric
Potentiometric titration
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. 2010
Calculated using seacarb after Orr et al. 2018
Ocean Acidification International Coordination Centre OA-ICC
Di Giglio, Sarah
Agüera, Antonio
Pernet, Philippe
M'Zoudi, Saloua
Angulo-Preckler, Carlos
Avila, Conxita
Dubois, Philippe
Seawater carbonate chemistry and acid-base physiology, skeleton properties, and metal contamination in two echinoderms
topic_facet Acid-base regulation
Animalia
Antarctic
Benthic animals
Benthos
CO2 vent
Coast and continental shelf
Echinodermata
Field observation
Growth/Morphology
Odontaster validus
Other metabolic rates
Other studied parameter or process
Polar
Single species
Sterechinus neumayeri
Type
Species
Registration number of species
Uniform resource locator/link to reference
Site
Coelomic fluid, pH
pH, standard deviation
Coelomic fluid, alkalinity
Alkalinity, total, standard deviation
Coelomic fluid, carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard deviation
Coelomic fluid, partial pressure of carbon dioxide
Partial pressure of carbon dioxide, standard deviation
Coelomic fluid, bicarbonate ion
Bicarbonate ion, standard deviation
Coelomic fluid, carbonate ion
Carbonate ion, standard deviation
Coelomic fluid, calcite saturation state
Calcite saturation state, standard deviation
Coelomic fluid, aragonite saturation state
Aragonite saturation state, standard deviation
Arm length
Arm length, standard deviation
Length
Length, standard deviation
Height
Height, standard deviation
Second moment of area
Second moment of area, standard deviation
Characteristic stress
Confidence interval
Weibull modulus
Force
Young's modulus
Cadmium
Cadmium, standard deviation
Copper
Copper, standard deviation
Iron
Iron, standard deviation
Lead
Lead, standard deviation
Zinc
Zinc, standard deviation
Temperature, water
Temperature, water, standard deviation
Salinity
Salinity, standard deviation
pH
Alkalinity, total
Carbon, inorganic, dissolved
Partial pressure of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Calcite saturation state
Aragonite saturation state
Carbonate system computation flag
Carbon dioxide
Carbon dioxide, standard deviation
Fugacity of carbon dioxide water at sea surface temperature wet air
Fugacity of carbon dioxide in seawater, standard deviation
Potentiometric
Potentiometric titration
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. 2010
Calculated using seacarb after Orr et al. 2018
Ocean Acidification International Coordination Centre OA-ICC
description Antarctic surface waters are expected to be the first to experience severe ocean acidification (OA) with carbonate undersaturation and large decreases in pH forecasted before the end of this century. Due to the long stability in environmental conditions and the relatively low daily and seasonal variations to which they are exposed, Antarctic marine organisms, especially those with a supposedly poor machinery to eliminate CO2 and protons and with a heavily calcified skeleton like echinoderms, are hypothesized as highly vulnerable to these environmental shifts. The opportunities offered by the natural pH gradient generated by vent activities in Deception Island caldera, Western Antarctic Peninsula, were used to investigate for the first time the acid-base physiologies, the impact of OA on the skeleton and the impact of pH on metal accumulation in the Antarctic sea star Odontaster validus and sea urchin Sterechinus neumayeri. The two species were sampled in four stations within the caldera, two at pH (total scale) 8.0- 8.1 and two at reduced pH 7.8. Measured variables were pH, alkalinity, and dissolved inorganic carbon of the coelomic fluid; characteristic fracture force, stress and Young's modulus using Weibull statistics and Cd, Cu, Fe, Pb and Zn concentrations in the integument, gonads and digestive system. Recorded acid-base characteristics of both studied species fit in the general picture deduced from temperate and tropical sea stars and sea urchins but conditions and possibly confounding factors, principally food availability and quality, in the studied stations prevented definitive conclusions. Reduced seawater pH 7.8 and metals had almost no impact on the skeleton mechanical properties of the two investigated species despite very high Cd concentrations in O. validus integument. Reduced pH was correlated to increased contamination by most metals but this relation was weak. Translocation and caging experiments taking into account food parameters are proposed to better understand future processes linked to ocean acidification and metal contamination in Antarctic echinoderms. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2021) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2021-03-23.
format Dataset
author Di Giglio, Sarah
Agüera, Antonio
Pernet, Philippe
M'Zoudi, Saloua
Angulo-Preckler, Carlos
Avila, Conxita
Dubois, Philippe
author_facet Di Giglio, Sarah
Agüera, Antonio
Pernet, Philippe
M'Zoudi, Saloua
Angulo-Preckler, Carlos
Avila, Conxita
Dubois, Philippe
author_sort Di Giglio, Sarah
title Seawater carbonate chemistry and acid-base physiology, skeleton properties, and metal contamination in two echinoderms
title_short Seawater carbonate chemistry and acid-base physiology, skeleton properties, and metal contamination in two echinoderms
title_full Seawater carbonate chemistry and acid-base physiology, skeleton properties, and metal contamination in two echinoderms
title_fullStr Seawater carbonate chemistry and acid-base physiology, skeleton properties, and metal contamination in two echinoderms
title_full_unstemmed Seawater carbonate chemistry and acid-base physiology, skeleton properties, and metal contamination in two echinoderms
title_sort seawater carbonate chemistry and acid-base physiology, skeleton properties, and metal contamination in two echinoderms
publisher PANGAEA - Data Publisher for Earth & Environmental Science
publishDate 2020
url https://dx.doi.org/10.1594/pangaea.929722
https://doi.pangaea.de/10.1594/PANGAEA.929722
long_lat ENVELOPE(-60.633,-60.633,-62.950,-62.950)
geographic Antarctic
The Antarctic
Antarctic Peninsula
Deception Island
geographic_facet Antarctic
The Antarctic
Antarctic Peninsula
Deception Island
genre Antarc*
Antarctic
Antarctic Peninsula
Deception Island
Ocean acidification
genre_facet Antarc*
Antarctic
Antarctic Peninsula
Deception Island
Ocean acidification
op_relation https://cran.r-project.org/web/packages/seacarb/index.html
https://dx.doi.org/10.1016/j.scitotenv.2020.142669
https://cran.r-project.org/web/packages/seacarb/index.html
op_rights Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
cc-by-4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.1594/pangaea.929722
https://doi.org/10.1016/j.scitotenv.2020.142669
_version_ 1766247585515831296
spelling ftdatacite:10.1594/pangaea.929722 2023-05-15T13:47:38+02:00 Seawater carbonate chemistry and acid-base physiology, skeleton properties, and metal contamination in two echinoderms Di Giglio, Sarah Agüera, Antonio Pernet, Philippe M'Zoudi, Saloua Angulo-Preckler, Carlos Avila, Conxita Dubois, Philippe 2020 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.929722 https://doi.pangaea.de/10.1594/PANGAEA.929722 en eng PANGAEA - Data Publisher for Earth & Environmental Science https://cran.r-project.org/web/packages/seacarb/index.html https://dx.doi.org/10.1016/j.scitotenv.2020.142669 https://cran.r-project.org/web/packages/seacarb/index.html Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 CC-BY Acid-base regulation Animalia Antarctic Benthic animals Benthos CO2 vent Coast and continental shelf Echinodermata Field observation Growth/Morphology Odontaster validus Other metabolic rates Other studied parameter or process Polar Single species Sterechinus neumayeri Type Species Registration number of species Uniform resource locator/link to reference Site Coelomic fluid, pH pH, standard deviation Coelomic fluid, alkalinity Alkalinity, total, standard deviation Coelomic fluid, carbon, inorganic, dissolved Carbon, inorganic, dissolved, standard deviation Coelomic fluid, partial pressure of carbon dioxide Partial pressure of carbon dioxide, standard deviation Coelomic fluid, bicarbonate ion Bicarbonate ion, standard deviation Coelomic fluid, carbonate ion Carbonate ion, standard deviation Coelomic fluid, calcite saturation state Calcite saturation state, standard deviation Coelomic fluid, aragonite saturation state Aragonite saturation state, standard deviation Arm length Arm length, standard deviation Length Length, standard deviation Height Height, standard deviation Second moment of area Second moment of area, standard deviation Characteristic stress Confidence interval Weibull modulus Force Young's modulus Cadmium Cadmium, standard deviation Copper Copper, standard deviation Iron Iron, standard deviation Lead Lead, standard deviation Zinc Zinc, standard deviation Temperature, water Temperature, water, standard deviation Salinity Salinity, standard deviation pH Alkalinity, total Carbon, inorganic, dissolved Partial pressure of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbonate ion Calcite saturation state Aragonite saturation state Carbonate system computation flag Carbon dioxide Carbon dioxide, standard deviation Fugacity of carbon dioxide water at sea surface temperature wet air Fugacity of carbon dioxide in seawater, standard deviation Potentiometric Potentiometric titration Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. 2010 Calculated using seacarb after Orr et al. 2018 Ocean Acidification International Coordination Centre OA-ICC dataset Dataset 2020 ftdatacite https://doi.org/10.1594/pangaea.929722 https://doi.org/10.1016/j.scitotenv.2020.142669 2022-02-08T17:10:29Z Antarctic surface waters are expected to be the first to experience severe ocean acidification (OA) with carbonate undersaturation and large decreases in pH forecasted before the end of this century. Due to the long stability in environmental conditions and the relatively low daily and seasonal variations to which they are exposed, Antarctic marine organisms, especially those with a supposedly poor machinery to eliminate CO2 and protons and with a heavily calcified skeleton like echinoderms, are hypothesized as highly vulnerable to these environmental shifts. The opportunities offered by the natural pH gradient generated by vent activities in Deception Island caldera, Western Antarctic Peninsula, were used to investigate for the first time the acid-base physiologies, the impact of OA on the skeleton and the impact of pH on metal accumulation in the Antarctic sea star Odontaster validus and sea urchin Sterechinus neumayeri. The two species were sampled in four stations within the caldera, two at pH (total scale) 8.0- 8.1 and two at reduced pH 7.8. Measured variables were pH, alkalinity, and dissolved inorganic carbon of the coelomic fluid; characteristic fracture force, stress and Young's modulus using Weibull statistics and Cd, Cu, Fe, Pb and Zn concentrations in the integument, gonads and digestive system. Recorded acid-base characteristics of both studied species fit in the general picture deduced from temperate and tropical sea stars and sea urchins but conditions and possibly confounding factors, principally food availability and quality, in the studied stations prevented definitive conclusions. Reduced seawater pH 7.8 and metals had almost no impact on the skeleton mechanical properties of the two investigated species despite very high Cd concentrations in O. validus integument. Reduced pH was correlated to increased contamination by most metals but this relation was weak. Translocation and caging experiments taking into account food parameters are proposed to better understand future processes linked to ocean acidification and metal contamination in Antarctic echinoderms. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2021) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2021-03-23. Dataset Antarc* Antarctic Antarctic Peninsula Deception Island Ocean acidification DataCite Metadata Store (German National Library of Science and Technology) Antarctic The Antarctic Antarctic Peninsula Deception Island ENVELOPE(-60.633,-60.633,-62.950,-62.950)