Seawater carbonate chemistry and coral calcification
Experiments with coral fragments (i.e. nubbins) have shown that net calcification is depressed by elevated PCO2. Evaluating the implications of this finding requires scaling of results from nubbins to colonies, yet the experiments to codify this process have not been carried out. Building from our p...
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PANGAEA - Data Publisher for Earth & Environmental Science
2020
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Online Access: | https://dx.doi.org/10.1594/pangaea.926042 https://doi.pangaea.de/10.1594/PANGAEA.926042 |
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openpolar |
institution |
Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
English |
topic |
Acropora hyacinthus Animalia Benthic animals Benthos Calcification/Dissolution Cnidaria Coast and continental shelf Containers and aquaria 20-1000 L or < 1 m**2 Growth/Morphology Laboratory experiment Single species South Pacific Temperature Tropical Type Species Registration number of species Uniform resource locator/link to reference Experiment duration Experiment Size Identification Treatment Diameter Area Calcification rate pH pH, standard error Replicates Alkalinity, total Alkalinity, total, standard error Carbon, inorganic, dissolved Carbon, inorganic, dissolved, standard error Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide water at sea surface temperature wet air, standard error Aragonite saturation state Aragonite saturation state, standard error Temperature, water Temperature, water, standard error Salinity Salinity, standard error Irradiance Irradiance, standard error Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbonate ion Calcite saturation state Potentiometric Potentiometric titration Calculated using seacarb Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC |
spellingShingle |
Acropora hyacinthus Animalia Benthic animals Benthos Calcification/Dissolution Cnidaria Coast and continental shelf Containers and aquaria 20-1000 L or < 1 m**2 Growth/Morphology Laboratory experiment Single species South Pacific Temperature Tropical Type Species Registration number of species Uniform resource locator/link to reference Experiment duration Experiment Size Identification Treatment Diameter Area Calcification rate pH pH, standard error Replicates Alkalinity, total Alkalinity, total, standard error Carbon, inorganic, dissolved Carbon, inorganic, dissolved, standard error Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide water at sea surface temperature wet air, standard error Aragonite saturation state Aragonite saturation state, standard error Temperature, water Temperature, water, standard error Salinity Salinity, standard error Irradiance Irradiance, standard error Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbonate ion Calcite saturation state Potentiometric Potentiometric titration Calculated using seacarb Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC Edmunds, Peter J Burgess, Scott C Seawater carbonate chemistry and coral calcification |
topic_facet |
Acropora hyacinthus Animalia Benthic animals Benthos Calcification/Dissolution Cnidaria Coast and continental shelf Containers and aquaria 20-1000 L or < 1 m**2 Growth/Morphology Laboratory experiment Single species South Pacific Temperature Tropical Type Species Registration number of species Uniform resource locator/link to reference Experiment duration Experiment Size Identification Treatment Diameter Area Calcification rate pH pH, standard error Replicates Alkalinity, total Alkalinity, total, standard error Carbon, inorganic, dissolved Carbon, inorganic, dissolved, standard error Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide water at sea surface temperature wet air, standard error Aragonite saturation state Aragonite saturation state, standard error Temperature, water Temperature, water, standard error Salinity Salinity, standard error Irradiance Irradiance, standard error Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbonate ion Calcite saturation state Potentiometric Potentiometric titration Calculated using seacarb Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC |
description |
Experiments with coral fragments (i.e. nubbins) have shown that net calcification is depressed by elevated PCO2. Evaluating the implications of this finding requires scaling of results from nubbins to colonies, yet the experiments to codify this process have not been carried out. Building from our previous research demonstrating that net calcification of Pocillopora verrucosa (2–13 cm diameter) was unaffected by PCO2 (400 and 1000 µatm) and temperature (26.5 and 29.7°C), we sought generality to this outcome by testing how colony size modulates PCO2 and temperature sensitivity in a branching acroporid. Together, these taxa represent two of the dominant lineages of branching corals on Indo-Pacific coral reefs. Two trials conducted over 2 years tested the hypothesis that the seasonal range in seawater temperature (26.5 and 29.2°C) and a future PCO2 (1062 µatm versus an ambient level of 461 µatm) affect net calcification of an ecologically relevant size range (5–20 cm diameter) of colonies of Acropora hyacinthus. As for P. verrucosa, the effects of temperature and PCO2 on net calcification (mg day−1) of A. verrucosa were not statistically detectable. These results support the generality of a null outcome on net calcification of exposing intact colonies of branching corals to environmental conditions contrasting seasonal variation in temperature and predicted future variation in PCO2. While there is a need to expand beyond an experimental culture relying on coral nubbins as tractable replicates, rigorously responding to this need poses substantial ethical and logistical challenges. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2020) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-12-11. |
format |
Dataset |
author |
Edmunds, Peter J Burgess, Scott C |
author_facet |
Edmunds, Peter J Burgess, Scott C |
author_sort |
Edmunds, Peter J |
title |
Seawater carbonate chemistry and coral calcification |
title_short |
Seawater carbonate chemistry and coral calcification |
title_full |
Seawater carbonate chemistry and coral calcification |
title_fullStr |
Seawater carbonate chemistry and coral calcification |
title_full_unstemmed |
Seawater carbonate chemistry and coral calcification |
title_sort |
seawater carbonate chemistry and coral calcification |
publisher |
PANGAEA - Data Publisher for Earth & Environmental Science |
publishDate |
2020 |
url |
https://dx.doi.org/10.1594/pangaea.926042 https://doi.pangaea.de/10.1594/PANGAEA.926042 |
geographic |
Pacific |
geographic_facet |
Pacific |
genre |
Ocean acidification |
genre_facet |
Ocean acidification |
op_relation |
https://CRAN.R-project.org/package=seacarb https://dx.doi.org/10.1242/jeb.217000 https://dx.doi.org/10.6073/pasta/c4490637abcbbd54899e28c7d4f74ae7 https://CRAN.R-project.org/package=seacarb |
op_rights |
Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.1594/pangaea.926042 https://doi.org/10.1242/jeb.217000 https://doi.org/10.6073/pasta/c4490637abcbbd54899e28c7d4f74ae7 |
_version_ |
1766158606078574592 |
spelling |
ftdatacite:10.1594/pangaea.926042 2023-05-15T17:51:27+02:00 Seawater carbonate chemistry and coral calcification Edmunds, Peter J Burgess, Scott C 2020 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.926042 https://doi.pangaea.de/10.1594/PANGAEA.926042 en eng PANGAEA - Data Publisher for Earth & Environmental Science https://CRAN.R-project.org/package=seacarb https://dx.doi.org/10.1242/jeb.217000 https://dx.doi.org/10.6073/pasta/c4490637abcbbd54899e28c7d4f74ae7 https://CRAN.R-project.org/package=seacarb Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 CC-BY Acropora hyacinthus Animalia Benthic animals Benthos Calcification/Dissolution Cnidaria Coast and continental shelf Containers and aquaria 20-1000 L or < 1 m**2 Growth/Morphology Laboratory experiment Single species South Pacific Temperature Tropical Type Species Registration number of species Uniform resource locator/link to reference Experiment duration Experiment Size Identification Treatment Diameter Area Calcification rate pH pH, standard error Replicates Alkalinity, total Alkalinity, total, standard error Carbon, inorganic, dissolved Carbon, inorganic, dissolved, standard error Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide water at sea surface temperature wet air, standard error Aragonite saturation state Aragonite saturation state, standard error Temperature, water Temperature, water, standard error Salinity Salinity, standard error Irradiance Irradiance, standard error Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbonate ion Calcite saturation state Potentiometric Potentiometric titration Calculated using seacarb Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC dataset Dataset 2020 ftdatacite https://doi.org/10.1594/pangaea.926042 https://doi.org/10.1242/jeb.217000 https://doi.org/10.6073/pasta/c4490637abcbbd54899e28c7d4f74ae7 2021-11-05T12:55:41Z Experiments with coral fragments (i.e. nubbins) have shown that net calcification is depressed by elevated PCO2. Evaluating the implications of this finding requires scaling of results from nubbins to colonies, yet the experiments to codify this process have not been carried out. Building from our previous research demonstrating that net calcification of Pocillopora verrucosa (2–13 cm diameter) was unaffected by PCO2 (400 and 1000 µatm) and temperature (26.5 and 29.7°C), we sought generality to this outcome by testing how colony size modulates PCO2 and temperature sensitivity in a branching acroporid. Together, these taxa represent two of the dominant lineages of branching corals on Indo-Pacific coral reefs. Two trials conducted over 2 years tested the hypothesis that the seasonal range in seawater temperature (26.5 and 29.2°C) and a future PCO2 (1062 µatm versus an ambient level of 461 µatm) affect net calcification of an ecologically relevant size range (5–20 cm diameter) of colonies of Acropora hyacinthus. As for P. verrucosa, the effects of temperature and PCO2 on net calcification (mg day−1) of A. verrucosa were not statistically detectable. These results support the generality of a null outcome on net calcification of exposing intact colonies of branching corals to environmental conditions contrasting seasonal variation in temperature and predicted future variation in PCO2. While there is a need to expand beyond an experimental culture relying on coral nubbins as tractable replicates, rigorously responding to this need poses substantial ethical and logistical challenges. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2020) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-12-11. Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology) Pacific |