Seawater carbonate chemistry and photosynthesis and photochemical efficiency of Porolithon onkodes

Ocean acidification (OA) is predicted to enhance photosynthesis in many marine taxa. However, photophysiology has multiple components that OA may affect differently, especially under different light environments, with potentially contrasting consequences for photosynthetic performance. Furthermore,...

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Bibliographic Details
Main Authors: Briggs, Amy A, Carpenter, Robert C
Format: Dataset
Language:English
Published: PANGAEA - Data Publisher for Earth & Environmental Science 2019
Subjects:
pH
Online Access:https://dx.doi.org/10.1594/pangaea.920025
https://doi.pangaea.de/10.1594/PANGAEA.920025
id ftdatacite:10.1594/pangaea.920025
record_format openpolar
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Benthos
Calcification/Dissolution
Coast and continental shelf
Containers and aquaria 20-1000 L or < 1 m**2
Laboratory experiment
Light
Macroalgae
Plantae
Porolithon onkodes
Primary production/Photosynthesis
Respiration
Rhodophyta
Single species
South Pacific
Tropical
Type
Species
Registration number of species
Uniform resource locator/link to reference
Experiment
Identification
Treatment
Surface area
Calcification rate of calcium carbonate
Net photosynthesis rate, oxygen
Respiration rate, oxygen
Gross photosynthesis rate, oxygen
Irradiance
Slope
Fluorescence, minimum
Fluorescence, maximum
Maximum photochemical quantum yield of photosystem II
Maximum gross photosynthesis rate, oxygen
Initial slope of the photosynthesis-irradiance curve
Light saturation
Temperature, water
Temperature, water, standard error
Alkalinity, total
Alkalinity, total, standard error
pH
pH, standard error
Partial pressure of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide water at sea surface temperature wet air, standard error
Bicarbonate ion
Bicarbonate ion, standard error
Carbonate ion
Carbonate ion, standard error
Calcite saturation state
Calcite saturation state, standard error
Irradiance, standard error
Salinity
Salinity, standard error
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Carbon, inorganic, dissolved
Aragonite saturation state
Potentiometric titration
Potentiometric
Calculated using seacarb
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
spellingShingle Benthos
Calcification/Dissolution
Coast and continental shelf
Containers and aquaria 20-1000 L or < 1 m**2
Laboratory experiment
Light
Macroalgae
Plantae
Porolithon onkodes
Primary production/Photosynthesis
Respiration
Rhodophyta
Single species
South Pacific
Tropical
Type
Species
Registration number of species
Uniform resource locator/link to reference
Experiment
Identification
Treatment
Surface area
Calcification rate of calcium carbonate
Net photosynthesis rate, oxygen
Respiration rate, oxygen
Gross photosynthesis rate, oxygen
Irradiance
Slope
Fluorescence, minimum
Fluorescence, maximum
Maximum photochemical quantum yield of photosystem II
Maximum gross photosynthesis rate, oxygen
Initial slope of the photosynthesis-irradiance curve
Light saturation
Temperature, water
Temperature, water, standard error
Alkalinity, total
Alkalinity, total, standard error
pH
pH, standard error
Partial pressure of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide water at sea surface temperature wet air, standard error
Bicarbonate ion
Bicarbonate ion, standard error
Carbonate ion
Carbonate ion, standard error
Calcite saturation state
Calcite saturation state, standard error
Irradiance, standard error
Salinity
Salinity, standard error
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Carbon, inorganic, dissolved
Aragonite saturation state
Potentiometric titration
Potentiometric
Calculated using seacarb
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
Briggs, Amy A
Carpenter, Robert C
Seawater carbonate chemistry and photosynthesis and photochemical efficiency of Porolithon onkodes
topic_facet Benthos
Calcification/Dissolution
Coast and continental shelf
Containers and aquaria 20-1000 L or < 1 m**2
Laboratory experiment
Light
Macroalgae
Plantae
Porolithon onkodes
Primary production/Photosynthesis
Respiration
Rhodophyta
Single species
South Pacific
Tropical
Type
Species
Registration number of species
Uniform resource locator/link to reference
Experiment
Identification
Treatment
Surface area
Calcification rate of calcium carbonate
Net photosynthesis rate, oxygen
Respiration rate, oxygen
Gross photosynthesis rate, oxygen
Irradiance
Slope
Fluorescence, minimum
Fluorescence, maximum
Maximum photochemical quantum yield of photosystem II
Maximum gross photosynthesis rate, oxygen
Initial slope of the photosynthesis-irradiance curve
Light saturation
Temperature, water
Temperature, water, standard error
Alkalinity, total
Alkalinity, total, standard error
pH
pH, standard error
Partial pressure of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide water at sea surface temperature wet air, standard error
Bicarbonate ion
Bicarbonate ion, standard error
Carbonate ion
Carbonate ion, standard error
Calcite saturation state
Calcite saturation state, standard error
Irradiance, standard error
Salinity
Salinity, standard error
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Carbon, inorganic, dissolved
Aragonite saturation state
Potentiometric titration
Potentiometric
Calculated using seacarb
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
description Ocean acidification (OA) is predicted to enhance photosynthesis in many marine taxa. However, photophysiology has multiple components that OA may affect differently, especially under different light environments, with potentially contrasting consequences for photosynthetic performance. Furthermore, because photosynthesis affects energetic budgets and internal acid-base dynamics, changes in it due to OA or light could mediate the sensitivity of other biological processes to OA (e.g. respiration and calcification). To better understand these effects, we conducted experiments on Porolithon onkodes, a common crustose coralline alga in Pacific coral reefs, crossing pCO2 and light treatments. Results indicate OA inhibited some aspects of photophysiology (maximum photochemical efficiency), facilitated others (alpha, the responsiveness of photosynthesis to sub-saturating light), and had no effect on others (maximum gross photosynthesis), with the first two effects depending on treatment light level. Light also exacerbated the increase in dark-adapted respiration under OA, but did not alter the decline in calcification. Light-adapted respiration did not respond to OA, potentially due to indirect effects of photosynthesis. Combined, results indicate OA will interact with light to alter energetic budgets and potentially resource allocation among photosynthetic processes in P. onkodes, likely shifting its light tolerance, and constraining it to a narrower range of light environments. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2019) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-07-07.
format Dataset
author Briggs, Amy A
Carpenter, Robert C
author_facet Briggs, Amy A
Carpenter, Robert C
author_sort Briggs, Amy A
title Seawater carbonate chemistry and photosynthesis and photochemical efficiency of Porolithon onkodes
title_short Seawater carbonate chemistry and photosynthesis and photochemical efficiency of Porolithon onkodes
title_full Seawater carbonate chemistry and photosynthesis and photochemical efficiency of Porolithon onkodes
title_fullStr Seawater carbonate chemistry and photosynthesis and photochemical efficiency of Porolithon onkodes
title_full_unstemmed Seawater carbonate chemistry and photosynthesis and photochemical efficiency of Porolithon onkodes
title_sort seawater carbonate chemistry and photosynthesis and photochemical efficiency of porolithon onkodes
publisher PANGAEA - Data Publisher for Earth & Environmental Science
publishDate 2019
url https://dx.doi.org/10.1594/pangaea.920025
https://doi.pangaea.de/10.1594/PANGAEA.920025
geographic Pacific
geographic_facet Pacific
genre Ocean acidification
genre_facet Ocean acidification
op_relation https://CRAN.R-project.org/package=seacarb
https://dx.doi.org/10.1038/s41598-019-40620-8
https://CRAN.R-project.org/package=seacarb
op_rights Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
cc-by-4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.1594/pangaea.920025
https://doi.org/10.1038/s41598-019-40620-8
_version_ 1766157850433814528
spelling ftdatacite:10.1594/pangaea.920025 2023-05-15T17:50:55+02:00 Seawater carbonate chemistry and photosynthesis and photochemical efficiency of Porolithon onkodes Briggs, Amy A Carpenter, Robert C 2019 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.920025 https://doi.pangaea.de/10.1594/PANGAEA.920025 en eng PANGAEA - Data Publisher for Earth & Environmental Science https://CRAN.R-project.org/package=seacarb https://dx.doi.org/10.1038/s41598-019-40620-8 https://CRAN.R-project.org/package=seacarb Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 CC-BY Benthos Calcification/Dissolution Coast and continental shelf Containers and aquaria 20-1000 L or < 1 m**2 Laboratory experiment Light Macroalgae Plantae Porolithon onkodes Primary production/Photosynthesis Respiration Rhodophyta Single species South Pacific Tropical Type Species Registration number of species Uniform resource locator/link to reference Experiment Identification Treatment Surface area Calcification rate of calcium carbonate Net photosynthesis rate, oxygen Respiration rate, oxygen Gross photosynthesis rate, oxygen Irradiance Slope Fluorescence, minimum Fluorescence, maximum Maximum photochemical quantum yield of photosystem II Maximum gross photosynthesis rate, oxygen Initial slope of the photosynthesis-irradiance curve Light saturation Temperature, water Temperature, water, standard error Alkalinity, total Alkalinity, total, standard error pH pH, standard error Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide water at sea surface temperature wet air, standard error Bicarbonate ion Bicarbonate ion, standard error Carbonate ion Carbonate ion, standard error Calcite saturation state Calcite saturation state, standard error Irradiance, standard error Salinity Salinity, standard error Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Carbon, inorganic, dissolved Aragonite saturation state Potentiometric titration Potentiometric Calculated using seacarb Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC dataset Dataset 2019 ftdatacite https://doi.org/10.1594/pangaea.920025 https://doi.org/10.1038/s41598-019-40620-8 2021-11-05T12:55:41Z Ocean acidification (OA) is predicted to enhance photosynthesis in many marine taxa. However, photophysiology has multiple components that OA may affect differently, especially under different light environments, with potentially contrasting consequences for photosynthetic performance. Furthermore, because photosynthesis affects energetic budgets and internal acid-base dynamics, changes in it due to OA or light could mediate the sensitivity of other biological processes to OA (e.g. respiration and calcification). To better understand these effects, we conducted experiments on Porolithon onkodes, a common crustose coralline alga in Pacific coral reefs, crossing pCO2 and light treatments. Results indicate OA inhibited some aspects of photophysiology (maximum photochemical efficiency), facilitated others (alpha, the responsiveness of photosynthesis to sub-saturating light), and had no effect on others (maximum gross photosynthesis), with the first two effects depending on treatment light level. Light also exacerbated the increase in dark-adapted respiration under OA, but did not alter the decline in calcification. Light-adapted respiration did not respond to OA, potentially due to indirect effects of photosynthesis. Combined, results indicate OA will interact with light to alter energetic budgets and potentially resource allocation among photosynthetic processes in P. onkodes, likely shifting its light tolerance, and constraining it to a narrower range of light environments. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2019) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-07-07. Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology) Pacific