Seawater carbonate chemistry and photosynthetic pigments and photophysiology of polar microalga Chlorella sp.

Ocean acidification, due to increased levels of anthropogenic carbon dioxide, is known to affect the physiology and growth of marine phytoplankton, especially in polar regions. However, the effect of acidification or carbonation on cellular metabolism in polar marine phytoplankton still remains an o...

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Bibliographic Details
Main Authors: Tan, Yong Hao, Lim, Phaik Eem, Beardall, John, Poong, Sze Wan, Phang, Siew Moi
Format: Dataset
Language:English
Published: PANGAEA - Data Publisher for Earth & Environmental Science 2019
Subjects:
pH
Online Access:https://dx.doi.org/10.1594/pangaea.916160
https://doi.pangaea.de/10.1594/PANGAEA.916160
id ftdatacite:10.1594/pangaea.916160
record_format openpolar
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Bottles or small containers/Aquaria <20 L
Chlorella sp.
Chlorophyta
Growth/Morphology
Laboratory experiment
Laboratory strains
Not applicable
Phytoplankton
Plantae
Primary production/Photosynthesis
Single species
Type
Species
Day of experiment
Treatment
Cell density
Cell density, standard deviation
Growth rate
Growth rate, standard deviation
Chlorophyll a per cell
Chlorophyll a, standard deviation
Carotenoids per cell
Carotenoids, standard deviation
Ratio
Ratio, standard deviation
Diameter
Diameter, standard deviation
Surface area
Surface area, standard deviation
Volume
Cell biovolume, standard deviation
Cell surface area/cell volume ratio
Cell surface area/cell volume, standard deviation
Photochemical quantum yield
Photochemical quantum yield, standard deviation
Maximum light utilization efficiency
Maximum light utilization efficiency, standard deviation
Maximal electron transport rate, relative
Maximal electron transport rate, relative, standard deviation
Non photochemical quenching, maximum
Non photochemical quenching, standard deviation
Light saturation
Light saturation, standard deviation
Temperature, water
Salinity
Salinity, standard deviation
pH
pH, standard deviation
Alkalinity, total
Alkalinity, total, standard deviation
Carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard deviation
Bicarbonate ion
Bicarbonate ion, standard deviation
Partial pressure of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide, standard deviation
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Carbonate ion
Aragonite saturation state
Calcite saturation state
Potentiometric
Potentiometric titration
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
spellingShingle Bottles or small containers/Aquaria <20 L
Chlorella sp.
Chlorophyta
Growth/Morphology
Laboratory experiment
Laboratory strains
Not applicable
Phytoplankton
Plantae
Primary production/Photosynthesis
Single species
Type
Species
Day of experiment
Treatment
Cell density
Cell density, standard deviation
Growth rate
Growth rate, standard deviation
Chlorophyll a per cell
Chlorophyll a, standard deviation
Carotenoids per cell
Carotenoids, standard deviation
Ratio
Ratio, standard deviation
Diameter
Diameter, standard deviation
Surface area
Surface area, standard deviation
Volume
Cell biovolume, standard deviation
Cell surface area/cell volume ratio
Cell surface area/cell volume, standard deviation
Photochemical quantum yield
Photochemical quantum yield, standard deviation
Maximum light utilization efficiency
Maximum light utilization efficiency, standard deviation
Maximal electron transport rate, relative
Maximal electron transport rate, relative, standard deviation
Non photochemical quenching, maximum
Non photochemical quenching, standard deviation
Light saturation
Light saturation, standard deviation
Temperature, water
Salinity
Salinity, standard deviation
pH
pH, standard deviation
Alkalinity, total
Alkalinity, total, standard deviation
Carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard deviation
Bicarbonate ion
Bicarbonate ion, standard deviation
Partial pressure of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide, standard deviation
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Carbonate ion
Aragonite saturation state
Calcite saturation state
Potentiometric
Potentiometric titration
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
Tan, Yong Hao
Lim, Phaik Eem
Beardall, John
Poong, Sze Wan
Phang, Siew Moi
Seawater carbonate chemistry and photosynthetic pigments and photophysiology of polar microalga Chlorella sp.
topic_facet Bottles or small containers/Aquaria <20 L
Chlorella sp.
Chlorophyta
Growth/Morphology
Laboratory experiment
Laboratory strains
Not applicable
Phytoplankton
Plantae
Primary production/Photosynthesis
Single species
Type
Species
Day of experiment
Treatment
Cell density
Cell density, standard deviation
Growth rate
Growth rate, standard deviation
Chlorophyll a per cell
Chlorophyll a, standard deviation
Carotenoids per cell
Carotenoids, standard deviation
Ratio
Ratio, standard deviation
Diameter
Diameter, standard deviation
Surface area
Surface area, standard deviation
Volume
Cell biovolume, standard deviation
Cell surface area/cell volume ratio
Cell surface area/cell volume, standard deviation
Photochemical quantum yield
Photochemical quantum yield, standard deviation
Maximum light utilization efficiency
Maximum light utilization efficiency, standard deviation
Maximal electron transport rate, relative
Maximal electron transport rate, relative, standard deviation
Non photochemical quenching, maximum
Non photochemical quenching, standard deviation
Light saturation
Light saturation, standard deviation
Temperature, water
Salinity
Salinity, standard deviation
pH
pH, standard deviation
Alkalinity, total
Alkalinity, total, standard deviation
Carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard deviation
Bicarbonate ion
Bicarbonate ion, standard deviation
Partial pressure of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide, standard deviation
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Carbonate ion
Aragonite saturation state
Calcite saturation state
Potentiometric
Potentiometric titration
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
description Ocean acidification, due to increased levels of anthropogenic carbon dioxide, is known to affect the physiology and growth of marine phytoplankton, especially in polar regions. However, the effect of acidification or carbonation on cellular metabolism in polar marine phytoplankton still remains an open question. There is some evidence that small chlorophytes may benefit more than other taxa of phytoplankton. To understand further how green polar picoplankton could acclimate to high oceanic CO2, studies were conducted on an Antarctic Chlorella sp. Chlorella sp. maintained its growth rate (∼0.180 /day), photosynthetic quantum yield (Fv/Fm = ∼0.69) and chlorophyll a (0.145 fg/cell) and carotenoid (0.06 fg/cell) contents under high CO2, while maximum rates of electron transport decreased and non-photochemical quenching increased under elevated CO2. GCMS-based metabolomic analysis reveal that this polar Chlorella strain modulated the levels of metabolites associated with energy, amino acid, fatty acid and carbohydrate production, which could favour its survival in an increasingly acidified ocean. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2019) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-05-6.
format Dataset
author Tan, Yong Hao
Lim, Phaik Eem
Beardall, John
Poong, Sze Wan
Phang, Siew Moi
author_facet Tan, Yong Hao
Lim, Phaik Eem
Beardall, John
Poong, Sze Wan
Phang, Siew Moi
author_sort Tan, Yong Hao
title Seawater carbonate chemistry and photosynthetic pigments and photophysiology of polar microalga Chlorella sp.
title_short Seawater carbonate chemistry and photosynthetic pigments and photophysiology of polar microalga Chlorella sp.
title_full Seawater carbonate chemistry and photosynthetic pigments and photophysiology of polar microalga Chlorella sp.
title_fullStr Seawater carbonate chemistry and photosynthetic pigments and photophysiology of polar microalga Chlorella sp.
title_full_unstemmed Seawater carbonate chemistry and photosynthetic pigments and photophysiology of polar microalga Chlorella sp.
title_sort seawater carbonate chemistry and photosynthetic pigments and photophysiology of polar microalga chlorella sp.
publisher PANGAEA - Data Publisher for Earth & Environmental Science
publishDate 2019
url https://dx.doi.org/10.1594/pangaea.916160
https://doi.pangaea.de/10.1594/PANGAEA.916160
geographic Antarctic
geographic_facet Antarctic
genre Antarc*
Antarctic
Ocean acidification
genre_facet Antarc*
Antarctic
Ocean acidification
op_relation https://CRAN.R-project.org/package=seacarb
https://dx.doi.org/10.1016/j.aquatox.2019.105349
https://CRAN.R-project.org/package=seacarb
op_rights Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
cc-by-4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.1594/pangaea.916160
https://doi.org/10.1016/j.aquatox.2019.105349
_version_ 1766264718798880768
spelling ftdatacite:10.1594/pangaea.916160 2023-05-15T13:57:07+02:00 Seawater carbonate chemistry and photosynthetic pigments and photophysiology of polar microalga Chlorella sp. Tan, Yong Hao Lim, Phaik Eem Beardall, John Poong, Sze Wan Phang, Siew Moi 2019 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.916160 https://doi.pangaea.de/10.1594/PANGAEA.916160 en eng PANGAEA - Data Publisher for Earth & Environmental Science https://CRAN.R-project.org/package=seacarb https://dx.doi.org/10.1016/j.aquatox.2019.105349 https://CRAN.R-project.org/package=seacarb Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 CC-BY Bottles or small containers/Aquaria <20 L Chlorella sp. Chlorophyta Growth/Morphology Laboratory experiment Laboratory strains Not applicable Phytoplankton Plantae Primary production/Photosynthesis Single species Type Species Day of experiment Treatment Cell density Cell density, standard deviation Growth rate Growth rate, standard deviation Chlorophyll a per cell Chlorophyll a, standard deviation Carotenoids per cell Carotenoids, standard deviation Ratio Ratio, standard deviation Diameter Diameter, standard deviation Surface area Surface area, standard deviation Volume Cell biovolume, standard deviation Cell surface area/cell volume ratio Cell surface area/cell volume, standard deviation Photochemical quantum yield Photochemical quantum yield, standard deviation Maximum light utilization efficiency Maximum light utilization efficiency, standard deviation Maximal electron transport rate, relative Maximal electron transport rate, relative, standard deviation Non photochemical quenching, maximum Non photochemical quenching, standard deviation Light saturation Light saturation, standard deviation Temperature, water Salinity Salinity, standard deviation pH pH, standard deviation Alkalinity, total Alkalinity, total, standard deviation Carbon, inorganic, dissolved Carbon, inorganic, dissolved, standard deviation Bicarbonate ion Bicarbonate ion, standard deviation Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide, standard deviation Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Carbonate ion Aragonite saturation state Calcite saturation state Potentiometric Potentiometric titration Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC dataset Dataset 2019 ftdatacite https://doi.org/10.1594/pangaea.916160 https://doi.org/10.1016/j.aquatox.2019.105349 2022-02-08T17:16:44Z Ocean acidification, due to increased levels of anthropogenic carbon dioxide, is known to affect the physiology and growth of marine phytoplankton, especially in polar regions. However, the effect of acidification or carbonation on cellular metabolism in polar marine phytoplankton still remains an open question. There is some evidence that small chlorophytes may benefit more than other taxa of phytoplankton. To understand further how green polar picoplankton could acclimate to high oceanic CO2, studies were conducted on an Antarctic Chlorella sp. Chlorella sp. maintained its growth rate (∼0.180 /day), photosynthetic quantum yield (Fv/Fm = ∼0.69) and chlorophyll a (0.145 fg/cell) and carotenoid (0.06 fg/cell) contents under high CO2, while maximum rates of electron transport decreased and non-photochemical quenching increased under elevated CO2. GCMS-based metabolomic analysis reveal that this polar Chlorella strain modulated the levels of metabolites associated with energy, amino acid, fatty acid and carbohydrate production, which could favour its survival in an increasingly acidified ocean. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2019) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-05-6. Dataset Antarc* Antarctic Ocean acidification DataCite Metadata Store (German National Library of Science and Technology) Antarctic