Seawater carbonate chemistry and photosynthetic pigments and photophysiology of polar microalga Chlorella sp.
Ocean acidification, due to increased levels of anthropogenic carbon dioxide, is known to affect the physiology and growth of marine phytoplankton, especially in polar regions. However, the effect of acidification or carbonation on cellular metabolism in polar marine phytoplankton still remains an o...
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Format: | Dataset |
Language: | English |
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PANGAEA - Data Publisher for Earth & Environmental Science
2019
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Online Access: | https://dx.doi.org/10.1594/pangaea.916160 https://doi.pangaea.de/10.1594/PANGAEA.916160 |
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ftdatacite:10.1594/pangaea.916160 |
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record_format |
openpolar |
institution |
Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
English |
topic |
Bottles or small containers/Aquaria <20 L Chlorella sp. Chlorophyta Growth/Morphology Laboratory experiment Laboratory strains Not applicable Phytoplankton Plantae Primary production/Photosynthesis Single species Type Species Day of experiment Treatment Cell density Cell density, standard deviation Growth rate Growth rate, standard deviation Chlorophyll a per cell Chlorophyll a, standard deviation Carotenoids per cell Carotenoids, standard deviation Ratio Ratio, standard deviation Diameter Diameter, standard deviation Surface area Surface area, standard deviation Volume Cell biovolume, standard deviation Cell surface area/cell volume ratio Cell surface area/cell volume, standard deviation Photochemical quantum yield Photochemical quantum yield, standard deviation Maximum light utilization efficiency Maximum light utilization efficiency, standard deviation Maximal electron transport rate, relative Maximal electron transport rate, relative, standard deviation Non photochemical quenching, maximum Non photochemical quenching, standard deviation Light saturation Light saturation, standard deviation Temperature, water Salinity Salinity, standard deviation pH pH, standard deviation Alkalinity, total Alkalinity, total, standard deviation Carbon, inorganic, dissolved Carbon, inorganic, dissolved, standard deviation Bicarbonate ion Bicarbonate ion, standard deviation Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide, standard deviation Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Carbonate ion Aragonite saturation state Calcite saturation state Potentiometric Potentiometric titration Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC |
spellingShingle |
Bottles or small containers/Aquaria <20 L Chlorella sp. Chlorophyta Growth/Morphology Laboratory experiment Laboratory strains Not applicable Phytoplankton Plantae Primary production/Photosynthesis Single species Type Species Day of experiment Treatment Cell density Cell density, standard deviation Growth rate Growth rate, standard deviation Chlorophyll a per cell Chlorophyll a, standard deviation Carotenoids per cell Carotenoids, standard deviation Ratio Ratio, standard deviation Diameter Diameter, standard deviation Surface area Surface area, standard deviation Volume Cell biovolume, standard deviation Cell surface area/cell volume ratio Cell surface area/cell volume, standard deviation Photochemical quantum yield Photochemical quantum yield, standard deviation Maximum light utilization efficiency Maximum light utilization efficiency, standard deviation Maximal electron transport rate, relative Maximal electron transport rate, relative, standard deviation Non photochemical quenching, maximum Non photochemical quenching, standard deviation Light saturation Light saturation, standard deviation Temperature, water Salinity Salinity, standard deviation pH pH, standard deviation Alkalinity, total Alkalinity, total, standard deviation Carbon, inorganic, dissolved Carbon, inorganic, dissolved, standard deviation Bicarbonate ion Bicarbonate ion, standard deviation Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide, standard deviation Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Carbonate ion Aragonite saturation state Calcite saturation state Potentiometric Potentiometric titration Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC Tan, Yong Hao Lim, Phaik Eem Beardall, John Poong, Sze Wan Phang, Siew Moi Seawater carbonate chemistry and photosynthetic pigments and photophysiology of polar microalga Chlorella sp. |
topic_facet |
Bottles or small containers/Aquaria <20 L Chlorella sp. Chlorophyta Growth/Morphology Laboratory experiment Laboratory strains Not applicable Phytoplankton Plantae Primary production/Photosynthesis Single species Type Species Day of experiment Treatment Cell density Cell density, standard deviation Growth rate Growth rate, standard deviation Chlorophyll a per cell Chlorophyll a, standard deviation Carotenoids per cell Carotenoids, standard deviation Ratio Ratio, standard deviation Diameter Diameter, standard deviation Surface area Surface area, standard deviation Volume Cell biovolume, standard deviation Cell surface area/cell volume ratio Cell surface area/cell volume, standard deviation Photochemical quantum yield Photochemical quantum yield, standard deviation Maximum light utilization efficiency Maximum light utilization efficiency, standard deviation Maximal electron transport rate, relative Maximal electron transport rate, relative, standard deviation Non photochemical quenching, maximum Non photochemical quenching, standard deviation Light saturation Light saturation, standard deviation Temperature, water Salinity Salinity, standard deviation pH pH, standard deviation Alkalinity, total Alkalinity, total, standard deviation Carbon, inorganic, dissolved Carbon, inorganic, dissolved, standard deviation Bicarbonate ion Bicarbonate ion, standard deviation Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide, standard deviation Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Carbonate ion Aragonite saturation state Calcite saturation state Potentiometric Potentiometric titration Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC |
description |
Ocean acidification, due to increased levels of anthropogenic carbon dioxide, is known to affect the physiology and growth of marine phytoplankton, especially in polar regions. However, the effect of acidification or carbonation on cellular metabolism in polar marine phytoplankton still remains an open question. There is some evidence that small chlorophytes may benefit more than other taxa of phytoplankton. To understand further how green polar picoplankton could acclimate to high oceanic CO2, studies were conducted on an Antarctic Chlorella sp. Chlorella sp. maintained its growth rate (∼0.180 /day), photosynthetic quantum yield (Fv/Fm = ∼0.69) and chlorophyll a (0.145 fg/cell) and carotenoid (0.06 fg/cell) contents under high CO2, while maximum rates of electron transport decreased and non-photochemical quenching increased under elevated CO2. GCMS-based metabolomic analysis reveal that this polar Chlorella strain modulated the levels of metabolites associated with energy, amino acid, fatty acid and carbohydrate production, which could favour its survival in an increasingly acidified ocean. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2019) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-05-6. |
format |
Dataset |
author |
Tan, Yong Hao Lim, Phaik Eem Beardall, John Poong, Sze Wan Phang, Siew Moi |
author_facet |
Tan, Yong Hao Lim, Phaik Eem Beardall, John Poong, Sze Wan Phang, Siew Moi |
author_sort |
Tan, Yong Hao |
title |
Seawater carbonate chemistry and photosynthetic pigments and photophysiology of polar microalga Chlorella sp. |
title_short |
Seawater carbonate chemistry and photosynthetic pigments and photophysiology of polar microalga Chlorella sp. |
title_full |
Seawater carbonate chemistry and photosynthetic pigments and photophysiology of polar microalga Chlorella sp. |
title_fullStr |
Seawater carbonate chemistry and photosynthetic pigments and photophysiology of polar microalga Chlorella sp. |
title_full_unstemmed |
Seawater carbonate chemistry and photosynthetic pigments and photophysiology of polar microalga Chlorella sp. |
title_sort |
seawater carbonate chemistry and photosynthetic pigments and photophysiology of polar microalga chlorella sp. |
publisher |
PANGAEA - Data Publisher for Earth & Environmental Science |
publishDate |
2019 |
url |
https://dx.doi.org/10.1594/pangaea.916160 https://doi.pangaea.de/10.1594/PANGAEA.916160 |
geographic |
Antarctic |
geographic_facet |
Antarctic |
genre |
Antarc* Antarctic Ocean acidification |
genre_facet |
Antarc* Antarctic Ocean acidification |
op_relation |
https://CRAN.R-project.org/package=seacarb https://dx.doi.org/10.1016/j.aquatox.2019.105349 https://CRAN.R-project.org/package=seacarb |
op_rights |
Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.1594/pangaea.916160 https://doi.org/10.1016/j.aquatox.2019.105349 |
_version_ |
1766264718798880768 |
spelling |
ftdatacite:10.1594/pangaea.916160 2023-05-15T13:57:07+02:00 Seawater carbonate chemistry and photosynthetic pigments and photophysiology of polar microalga Chlorella sp. Tan, Yong Hao Lim, Phaik Eem Beardall, John Poong, Sze Wan Phang, Siew Moi 2019 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.916160 https://doi.pangaea.de/10.1594/PANGAEA.916160 en eng PANGAEA - Data Publisher for Earth & Environmental Science https://CRAN.R-project.org/package=seacarb https://dx.doi.org/10.1016/j.aquatox.2019.105349 https://CRAN.R-project.org/package=seacarb Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 CC-BY Bottles or small containers/Aquaria <20 L Chlorella sp. Chlorophyta Growth/Morphology Laboratory experiment Laboratory strains Not applicable Phytoplankton Plantae Primary production/Photosynthesis Single species Type Species Day of experiment Treatment Cell density Cell density, standard deviation Growth rate Growth rate, standard deviation Chlorophyll a per cell Chlorophyll a, standard deviation Carotenoids per cell Carotenoids, standard deviation Ratio Ratio, standard deviation Diameter Diameter, standard deviation Surface area Surface area, standard deviation Volume Cell biovolume, standard deviation Cell surface area/cell volume ratio Cell surface area/cell volume, standard deviation Photochemical quantum yield Photochemical quantum yield, standard deviation Maximum light utilization efficiency Maximum light utilization efficiency, standard deviation Maximal electron transport rate, relative Maximal electron transport rate, relative, standard deviation Non photochemical quenching, maximum Non photochemical quenching, standard deviation Light saturation Light saturation, standard deviation Temperature, water Salinity Salinity, standard deviation pH pH, standard deviation Alkalinity, total Alkalinity, total, standard deviation Carbon, inorganic, dissolved Carbon, inorganic, dissolved, standard deviation Bicarbonate ion Bicarbonate ion, standard deviation Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide, standard deviation Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Carbonate ion Aragonite saturation state Calcite saturation state Potentiometric Potentiometric titration Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC dataset Dataset 2019 ftdatacite https://doi.org/10.1594/pangaea.916160 https://doi.org/10.1016/j.aquatox.2019.105349 2022-02-08T17:16:44Z Ocean acidification, due to increased levels of anthropogenic carbon dioxide, is known to affect the physiology and growth of marine phytoplankton, especially in polar regions. However, the effect of acidification or carbonation on cellular metabolism in polar marine phytoplankton still remains an open question. There is some evidence that small chlorophytes may benefit more than other taxa of phytoplankton. To understand further how green polar picoplankton could acclimate to high oceanic CO2, studies were conducted on an Antarctic Chlorella sp. Chlorella sp. maintained its growth rate (∼0.180 /day), photosynthetic quantum yield (Fv/Fm = ∼0.69) and chlorophyll a (0.145 fg/cell) and carotenoid (0.06 fg/cell) contents under high CO2, while maximum rates of electron transport decreased and non-photochemical quenching increased under elevated CO2. GCMS-based metabolomic analysis reveal that this polar Chlorella strain modulated the levels of metabolites associated with energy, amino acid, fatty acid and carbohydrate production, which could favour its survival in an increasingly acidified ocean. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2019) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-05-6. Dataset Antarc* Antarctic Ocean acidification DataCite Metadata Store (German National Library of Science and Technology) Antarctic |