Seawater carbonate chemistry and coccolith calcite mass of Emiliania huxleyi ...
To understand the response of marine calcifying organisms under high CO2 scenarios, it is critical to study their calcification patterns in the natural environment. This paper focuses on a major calcifying phytoplankton group, the coccolithophores, through the analysis of water samples collected alo...
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ftdatacite:10.1594/pangaea.914922 2023-05-15T17:51:17+02:00 Seawater carbonate chemistry and coccolith calcite mass of Emiliania huxleyi ... D'Amario, Barbara Ziveri, Patrizia Grelaud, Michaël Oviedo, Angela Maria 2018 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.914922 https://doi.pangaea.de/10.1594/PANGAEA.914922 en eng PANGAEA https://CRAN.R-project.org/package=seacarb https://dx.doi.org/10.1371/journal.pone.0201161 https://dx.doi.org/10.1594/pangaea.856648 https://dx.doi.org/10.1594/pangaea.885694 https://CRAN.R-project.org/package=seacarb Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 Chromista Coast and continental shelf Emiliania huxleyi Field observation Growth/Morphology Haptophyta Mediterranean Sea Pelagos Phytoplankton Single species Temperate Event label Type Species Registration number of species Uniform resource locator/link to reference LATITUDE LONGITUDE ELEVATION Station label Bottle number DATE/TIME DEPTH, water Pressure, water Temperature, water Salinity Nitrate and Nitrite Phosphate Oxygen pH Partial pressure of carbon dioxide water at sea surface temperature wet air Carbonate ion Alkalinity, total Radiation, photosynthetically active Fluorescence, chlorophyll Percentage Coccoliths, mass Coccoliths, length Calcification index Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbon, inorganic, dissolved Aragonite saturation state Calcite saturation state CTD/Rosette CTD Nutrient autoanalyzer Bran and Luebbe, AAIII Oxygen sensor, SBE 43 dataset Dataset 2018 ftdatacite https://doi.org/10.1594/pangaea.91492210.1371/journal.pone.020116110.1594/pangaea.85664810.1594/pangaea.885694 2023-04-03T13:11:41Z To understand the response of marine calcifying organisms under high CO2 scenarios, it is critical to study their calcification patterns in the natural environment. This paper focuses on a major calcifying phytoplankton group, the coccolithophores, through the analysis of water samples collected along a W-E Mediterranean transect during two research cruises, in April 2011 (Meteor cruise M84/3) and May 2013 (MedSeA cruise 2013). The Mediterranean Sea is a marginal sea characterized by large biogeochemical gradients. Currently, it is undergoing both warming and ocean acidification, processes which are rapidly modifying species distribution and calcification. The species Emiliania huxleyi largely dominates the total coccolithophore production in present day oceans and marine basins, including the Mediterranean Sea. A series of morphometric measurements were performed on the coccoliths of this species to estimate their mass, length and calculate a calcification index (proxy for the size-normalized calcification ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2019) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-04-16.Coccolith mass: for each sample, mass measurements were done with SYRACO (Beaufort and Dollfus, 2004; doi:10.1016/j.marmicro.2003.09.003) on at least 100 - 300 coccoliths and then averagedCoccolith length: for each sample, length measurements were done with SYRACO (Beaufort and Dollfus, 2004; doi:10.1016/j.marmicro.2003.09.003) on at least 100 - 300 coccoliths and then averagedCoccolith, corrected length: averaged coccolith lengths obtained from SYRACO where converted into Lc using the formula: Lc = (0.585 x coccolith length from SYRACO) + 0.4537Calcification index: Ci=Ms/Mn); Mn=coccolith ... Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology) |
institution |
Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
English |
topic |
Chromista Coast and continental shelf Emiliania huxleyi Field observation Growth/Morphology Haptophyta Mediterranean Sea Pelagos Phytoplankton Single species Temperate Event label Type Species Registration number of species Uniform resource locator/link to reference LATITUDE LONGITUDE ELEVATION Station label Bottle number DATE/TIME DEPTH, water Pressure, water Temperature, water Salinity Nitrate and Nitrite Phosphate Oxygen pH Partial pressure of carbon dioxide water at sea surface temperature wet air Carbonate ion Alkalinity, total Radiation, photosynthetically active Fluorescence, chlorophyll Percentage Coccoliths, mass Coccoliths, length Calcification index Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbon, inorganic, dissolved Aragonite saturation state Calcite saturation state CTD/Rosette CTD Nutrient autoanalyzer Bran and Luebbe, AAIII Oxygen sensor, SBE 43 |
spellingShingle |
Chromista Coast and continental shelf Emiliania huxleyi Field observation Growth/Morphology Haptophyta Mediterranean Sea Pelagos Phytoplankton Single species Temperate Event label Type Species Registration number of species Uniform resource locator/link to reference LATITUDE LONGITUDE ELEVATION Station label Bottle number DATE/TIME DEPTH, water Pressure, water Temperature, water Salinity Nitrate and Nitrite Phosphate Oxygen pH Partial pressure of carbon dioxide water at sea surface temperature wet air Carbonate ion Alkalinity, total Radiation, photosynthetically active Fluorescence, chlorophyll Percentage Coccoliths, mass Coccoliths, length Calcification index Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbon, inorganic, dissolved Aragonite saturation state Calcite saturation state CTD/Rosette CTD Nutrient autoanalyzer Bran and Luebbe, AAIII Oxygen sensor, SBE 43 D'Amario, Barbara Ziveri, Patrizia Grelaud, Michaël Oviedo, Angela Maria Seawater carbonate chemistry and coccolith calcite mass of Emiliania huxleyi ... |
topic_facet |
Chromista Coast and continental shelf Emiliania huxleyi Field observation Growth/Morphology Haptophyta Mediterranean Sea Pelagos Phytoplankton Single species Temperate Event label Type Species Registration number of species Uniform resource locator/link to reference LATITUDE LONGITUDE ELEVATION Station label Bottle number DATE/TIME DEPTH, water Pressure, water Temperature, water Salinity Nitrate and Nitrite Phosphate Oxygen pH Partial pressure of carbon dioxide water at sea surface temperature wet air Carbonate ion Alkalinity, total Radiation, photosynthetically active Fluorescence, chlorophyll Percentage Coccoliths, mass Coccoliths, length Calcification index Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbon, inorganic, dissolved Aragonite saturation state Calcite saturation state CTD/Rosette CTD Nutrient autoanalyzer Bran and Luebbe, AAIII Oxygen sensor, SBE 43 |
description |
To understand the response of marine calcifying organisms under high CO2 scenarios, it is critical to study their calcification patterns in the natural environment. This paper focuses on a major calcifying phytoplankton group, the coccolithophores, through the analysis of water samples collected along a W-E Mediterranean transect during two research cruises, in April 2011 (Meteor cruise M84/3) and May 2013 (MedSeA cruise 2013). The Mediterranean Sea is a marginal sea characterized by large biogeochemical gradients. Currently, it is undergoing both warming and ocean acidification, processes which are rapidly modifying species distribution and calcification. The species Emiliania huxleyi largely dominates the total coccolithophore production in present day oceans and marine basins, including the Mediterranean Sea. A series of morphometric measurements were performed on the coccoliths of this species to estimate their mass, length and calculate a calcification index (proxy for the size-normalized calcification ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2019) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-04-16.Coccolith mass: for each sample, mass measurements were done with SYRACO (Beaufort and Dollfus, 2004; doi:10.1016/j.marmicro.2003.09.003) on at least 100 - 300 coccoliths and then averagedCoccolith length: for each sample, length measurements were done with SYRACO (Beaufort and Dollfus, 2004; doi:10.1016/j.marmicro.2003.09.003) on at least 100 - 300 coccoliths and then averagedCoccolith, corrected length: averaged coccolith lengths obtained from SYRACO where converted into Lc using the formula: Lc = (0.585 x coccolith length from SYRACO) + 0.4537Calcification index: Ci=Ms/Mn); Mn=coccolith ... |
format |
Dataset |
author |
D'Amario, Barbara Ziveri, Patrizia Grelaud, Michaël Oviedo, Angela Maria |
author_facet |
D'Amario, Barbara Ziveri, Patrizia Grelaud, Michaël Oviedo, Angela Maria |
author_sort |
D'Amario, Barbara |
title |
Seawater carbonate chemistry and coccolith calcite mass of Emiliania huxleyi ... |
title_short |
Seawater carbonate chemistry and coccolith calcite mass of Emiliania huxleyi ... |
title_full |
Seawater carbonate chemistry and coccolith calcite mass of Emiliania huxleyi ... |
title_fullStr |
Seawater carbonate chemistry and coccolith calcite mass of Emiliania huxleyi ... |
title_full_unstemmed |
Seawater carbonate chemistry and coccolith calcite mass of Emiliania huxleyi ... |
title_sort |
seawater carbonate chemistry and coccolith calcite mass of emiliania huxleyi ... |
publisher |
PANGAEA |
publishDate |
2018 |
url |
https://dx.doi.org/10.1594/pangaea.914922 https://doi.pangaea.de/10.1594/PANGAEA.914922 |
genre |
Ocean acidification |
genre_facet |
Ocean acidification |
op_relation |
https://CRAN.R-project.org/package=seacarb https://dx.doi.org/10.1371/journal.pone.0201161 https://dx.doi.org/10.1594/pangaea.856648 https://dx.doi.org/10.1594/pangaea.885694 https://CRAN.R-project.org/package=seacarb |
op_rights |
Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 |
op_doi |
https://doi.org/10.1594/pangaea.91492210.1371/journal.pone.020116110.1594/pangaea.85664810.1594/pangaea.885694 |
_version_ |
1766158384014295040 |