Metadata and NCBI-Accession numbers of 16S data for seawater and Craniella sponges from the North Atlantic Ocean and an aquarium experiment in 2017 and 2018 ...
Deep-sea sponge grounds are underexplored ecosystems that provide numerous goods and services to the functioning of the deep-sea. This study assessed the microbial diversity (by 16S rRNA gene amplicon sequencing) in embryos, juveniles and adults of Craniella zetlandica and Craniella infrequens, comm...
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ftdatacite:10.1594/pangaea.913890 2024-09-15T18:21:46+00:00 Metadata and NCBI-Accession numbers of 16S data for seawater and Craniella sponges from the North Atlantic Ocean and an aquarium experiment in 2017 and 2018 ... Busch, Kathrin Wurz, Erik Rapp, Hans Tore Bayer, Kristina Franke, Andre Hentschel, Ute 2020 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.913890 https://doi.pangaea.de/10.1594/PANGAEA.913890 en eng PANGAEA https://dx.doi.org/10.3389/fmars.2020.00674 https://dx.doi.org/10.1594/pangaea.918218 Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 amplicon sequencing Chloroflexi Craniella early life stages fluorescence in situ hybridisation symbiosis vulnerable marine ecosystems Event label DATE/TIME LATITUDE LONGITUDE Device type Sample code/label Sample type Sample position Identification Accession number, genetics Area/locality DEPTH, water Campaign Well-known text Experiment CTD/Rosette Remote operated vehicle Agassiz Trawl GS2017110 GS2018108 G. O. Sars 2003 Deep-sea Sponge Grounds Ecosystems of the North Atlantic SponGES Dataset dataset 2020 ftdatacite https://doi.org/10.1594/pangaea.91389010.3389/fmars.2020.0067410.1594/pangaea.918218 2024-07-03T13:11:36Z Deep-sea sponge grounds are underexplored ecosystems that provide numerous goods and services to the functioning of the deep-sea. This study assessed the microbial diversity (by 16S rRNA gene amplicon sequencing) in embryos, juveniles and adults of Craniella zetlandica and Craniella infrequens, common and abundant representatives of deep-sea sponge grounds in the North Atlantic. For this study, in total 39 sponge individuals of the two sponge species were collected and analysed for their associated microbial community composition: C. zetlandica (8 adults, of which one was brooding, and 9 juveniles) and C. infrequens (8 adults, of which four were brooding, and 9 juveniles). We use the term 'juvenile' for small (i.e. mean diameter = 1 cm for C. infrequens; and maximal diameter = 0.3 cm for C. zetlandica), young individuals. For C. zetlandica, juveniles were sampled in September 2018 from an aquarium system (Bergen, Norway). C. zetlandica juveniles were smaller (and most likely younger) than the in situ sampled ... Dataset North Atlantic DataCite |
institution |
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collection |
DataCite |
op_collection_id |
ftdatacite |
language |
English |
topic |
amplicon sequencing Chloroflexi Craniella early life stages fluorescence in situ hybridisation symbiosis vulnerable marine ecosystems Event label DATE/TIME LATITUDE LONGITUDE Device type Sample code/label Sample type Sample position Identification Accession number, genetics Area/locality DEPTH, water Campaign Well-known text Experiment CTD/Rosette Remote operated vehicle Agassiz Trawl GS2017110 GS2018108 G. O. Sars 2003 Deep-sea Sponge Grounds Ecosystems of the North Atlantic SponGES |
spellingShingle |
amplicon sequencing Chloroflexi Craniella early life stages fluorescence in situ hybridisation symbiosis vulnerable marine ecosystems Event label DATE/TIME LATITUDE LONGITUDE Device type Sample code/label Sample type Sample position Identification Accession number, genetics Area/locality DEPTH, water Campaign Well-known text Experiment CTD/Rosette Remote operated vehicle Agassiz Trawl GS2017110 GS2018108 G. O. Sars 2003 Deep-sea Sponge Grounds Ecosystems of the North Atlantic SponGES Busch, Kathrin Wurz, Erik Rapp, Hans Tore Bayer, Kristina Franke, Andre Hentschel, Ute Metadata and NCBI-Accession numbers of 16S data for seawater and Craniella sponges from the North Atlantic Ocean and an aquarium experiment in 2017 and 2018 ... |
topic_facet |
amplicon sequencing Chloroflexi Craniella early life stages fluorescence in situ hybridisation symbiosis vulnerable marine ecosystems Event label DATE/TIME LATITUDE LONGITUDE Device type Sample code/label Sample type Sample position Identification Accession number, genetics Area/locality DEPTH, water Campaign Well-known text Experiment CTD/Rosette Remote operated vehicle Agassiz Trawl GS2017110 GS2018108 G. O. Sars 2003 Deep-sea Sponge Grounds Ecosystems of the North Atlantic SponGES |
description |
Deep-sea sponge grounds are underexplored ecosystems that provide numerous goods and services to the functioning of the deep-sea. This study assessed the microbial diversity (by 16S rRNA gene amplicon sequencing) in embryos, juveniles and adults of Craniella zetlandica and Craniella infrequens, common and abundant representatives of deep-sea sponge grounds in the North Atlantic. For this study, in total 39 sponge individuals of the two sponge species were collected and analysed for their associated microbial community composition: C. zetlandica (8 adults, of which one was brooding, and 9 juveniles) and C. infrequens (8 adults, of which four were brooding, and 9 juveniles). We use the term 'juvenile' for small (i.e. mean diameter = 1 cm for C. infrequens; and maximal diameter = 0.3 cm for C. zetlandica), young individuals. For C. zetlandica, juveniles were sampled in September 2018 from an aquarium system (Bergen, Norway). C. zetlandica juveniles were smaller (and most likely younger) than the in situ sampled ... |
format |
Dataset |
author |
Busch, Kathrin Wurz, Erik Rapp, Hans Tore Bayer, Kristina Franke, Andre Hentschel, Ute |
author_facet |
Busch, Kathrin Wurz, Erik Rapp, Hans Tore Bayer, Kristina Franke, Andre Hentschel, Ute |
author_sort |
Busch, Kathrin |
title |
Metadata and NCBI-Accession numbers of 16S data for seawater and Craniella sponges from the North Atlantic Ocean and an aquarium experiment in 2017 and 2018 ... |
title_short |
Metadata and NCBI-Accession numbers of 16S data for seawater and Craniella sponges from the North Atlantic Ocean and an aquarium experiment in 2017 and 2018 ... |
title_full |
Metadata and NCBI-Accession numbers of 16S data for seawater and Craniella sponges from the North Atlantic Ocean and an aquarium experiment in 2017 and 2018 ... |
title_fullStr |
Metadata and NCBI-Accession numbers of 16S data for seawater and Craniella sponges from the North Atlantic Ocean and an aquarium experiment in 2017 and 2018 ... |
title_full_unstemmed |
Metadata and NCBI-Accession numbers of 16S data for seawater and Craniella sponges from the North Atlantic Ocean and an aquarium experiment in 2017 and 2018 ... |
title_sort |
metadata and ncbi-accession numbers of 16s data for seawater and craniella sponges from the north atlantic ocean and an aquarium experiment in 2017 and 2018 ... |
publisher |
PANGAEA |
publishDate |
2020 |
url |
https://dx.doi.org/10.1594/pangaea.913890 https://doi.pangaea.de/10.1594/PANGAEA.913890 |
genre |
North Atlantic |
genre_facet |
North Atlantic |
op_relation |
https://dx.doi.org/10.3389/fmars.2020.00674 https://dx.doi.org/10.1594/pangaea.918218 |
op_rights |
Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 |
op_doi |
https://doi.org/10.1594/pangaea.91389010.3389/fmars.2020.0067410.1594/pangaea.918218 |
_version_ |
1810460696916262912 |