Metadata and NCBI-Accession numbers of 16S data for seawater and Craniella sponges from the North Atlantic Ocean and an aquarium experiment in 2017 and 2018 ...

Deep-sea sponge grounds are underexplored ecosystems that provide numerous goods and services to the functioning of the deep-sea. This study assessed the microbial diversity (by 16S rRNA gene amplicon sequencing) in embryos, juveniles and adults of Craniella zetlandica and Craniella infrequens, comm...

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Main Authors: Busch, Kathrin, Wurz, Erik, Rapp, Hans Tore, Bayer, Kristina, Franke, Andre, Hentschel, Ute
Format: Dataset
Language:English
Published: PANGAEA 2020
Subjects:
Online Access:https://dx.doi.org/10.1594/pangaea.913890
https://doi.pangaea.de/10.1594/PANGAEA.913890
id ftdatacite:10.1594/pangaea.913890
record_format openpolar
spelling ftdatacite:10.1594/pangaea.913890 2024-09-15T18:21:46+00:00 Metadata and NCBI-Accession numbers of 16S data for seawater and Craniella sponges from the North Atlantic Ocean and an aquarium experiment in 2017 and 2018 ... Busch, Kathrin Wurz, Erik Rapp, Hans Tore Bayer, Kristina Franke, Andre Hentschel, Ute 2020 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.913890 https://doi.pangaea.de/10.1594/PANGAEA.913890 en eng PANGAEA https://dx.doi.org/10.3389/fmars.2020.00674 https://dx.doi.org/10.1594/pangaea.918218 Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 amplicon sequencing Chloroflexi Craniella early life stages fluorescence in situ hybridisation symbiosis vulnerable marine ecosystems Event label DATE/TIME LATITUDE LONGITUDE Device type Sample code/label Sample type Sample position Identification Accession number, genetics Area/locality DEPTH, water Campaign Well-known text Experiment CTD/Rosette Remote operated vehicle Agassiz Trawl GS2017110 GS2018108 G. O. Sars 2003 Deep-sea Sponge Grounds Ecosystems of the North Atlantic SponGES Dataset dataset 2020 ftdatacite https://doi.org/10.1594/pangaea.91389010.3389/fmars.2020.0067410.1594/pangaea.918218 2024-07-03T13:11:36Z Deep-sea sponge grounds are underexplored ecosystems that provide numerous goods and services to the functioning of the deep-sea. This study assessed the microbial diversity (by 16S rRNA gene amplicon sequencing) in embryos, juveniles and adults of Craniella zetlandica and Craniella infrequens, common and abundant representatives of deep-sea sponge grounds in the North Atlantic. For this study, in total 39 sponge individuals of the two sponge species were collected and analysed for their associated microbial community composition: C. zetlandica (8 adults, of which one was brooding, and 9 juveniles) and C. infrequens (8 adults, of which four were brooding, and 9 juveniles). We use the term 'juvenile' for small (i.e. mean diameter = 1 cm for C. infrequens; and maximal diameter = 0.3 cm for C. zetlandica), young individuals. For C. zetlandica, juveniles were sampled in September 2018 from an aquarium system (Bergen, Norway). C. zetlandica juveniles were smaller (and most likely younger) than the in situ sampled ... Dataset North Atlantic DataCite
institution Open Polar
collection DataCite
op_collection_id ftdatacite
language English
topic amplicon sequencing
Chloroflexi
Craniella
early life stages
fluorescence in situ hybridisation
symbiosis
vulnerable marine ecosystems
Event label
DATE/TIME
LATITUDE
LONGITUDE
Device type
Sample code/label
Sample type
Sample position
Identification
Accession number, genetics
Area/locality
DEPTH, water
Campaign
Well-known text
Experiment
CTD/Rosette
Remote operated vehicle
Agassiz Trawl
GS2017110
GS2018108
G. O. Sars 2003
Deep-sea Sponge Grounds Ecosystems of the North Atlantic SponGES
spellingShingle amplicon sequencing
Chloroflexi
Craniella
early life stages
fluorescence in situ hybridisation
symbiosis
vulnerable marine ecosystems
Event label
DATE/TIME
LATITUDE
LONGITUDE
Device type
Sample code/label
Sample type
Sample position
Identification
Accession number, genetics
Area/locality
DEPTH, water
Campaign
Well-known text
Experiment
CTD/Rosette
Remote operated vehicle
Agassiz Trawl
GS2017110
GS2018108
G. O. Sars 2003
Deep-sea Sponge Grounds Ecosystems of the North Atlantic SponGES
Busch, Kathrin
Wurz, Erik
Rapp, Hans Tore
Bayer, Kristina
Franke, Andre
Hentschel, Ute
Metadata and NCBI-Accession numbers of 16S data for seawater and Craniella sponges from the North Atlantic Ocean and an aquarium experiment in 2017 and 2018 ...
topic_facet amplicon sequencing
Chloroflexi
Craniella
early life stages
fluorescence in situ hybridisation
symbiosis
vulnerable marine ecosystems
Event label
DATE/TIME
LATITUDE
LONGITUDE
Device type
Sample code/label
Sample type
Sample position
Identification
Accession number, genetics
Area/locality
DEPTH, water
Campaign
Well-known text
Experiment
CTD/Rosette
Remote operated vehicle
Agassiz Trawl
GS2017110
GS2018108
G. O. Sars 2003
Deep-sea Sponge Grounds Ecosystems of the North Atlantic SponGES
description Deep-sea sponge grounds are underexplored ecosystems that provide numerous goods and services to the functioning of the deep-sea. This study assessed the microbial diversity (by 16S rRNA gene amplicon sequencing) in embryos, juveniles and adults of Craniella zetlandica and Craniella infrequens, common and abundant representatives of deep-sea sponge grounds in the North Atlantic. For this study, in total 39 sponge individuals of the two sponge species were collected and analysed for their associated microbial community composition: C. zetlandica (8 adults, of which one was brooding, and 9 juveniles) and C. infrequens (8 adults, of which four were brooding, and 9 juveniles). We use the term 'juvenile' for small (i.e. mean diameter = 1 cm for C. infrequens; and maximal diameter = 0.3 cm for C. zetlandica), young individuals. For C. zetlandica, juveniles were sampled in September 2018 from an aquarium system (Bergen, Norway). C. zetlandica juveniles were smaller (and most likely younger) than the in situ sampled ...
format Dataset
author Busch, Kathrin
Wurz, Erik
Rapp, Hans Tore
Bayer, Kristina
Franke, Andre
Hentschel, Ute
author_facet Busch, Kathrin
Wurz, Erik
Rapp, Hans Tore
Bayer, Kristina
Franke, Andre
Hentschel, Ute
author_sort Busch, Kathrin
title Metadata and NCBI-Accession numbers of 16S data for seawater and Craniella sponges from the North Atlantic Ocean and an aquarium experiment in 2017 and 2018 ...
title_short Metadata and NCBI-Accession numbers of 16S data for seawater and Craniella sponges from the North Atlantic Ocean and an aquarium experiment in 2017 and 2018 ...
title_full Metadata and NCBI-Accession numbers of 16S data for seawater and Craniella sponges from the North Atlantic Ocean and an aquarium experiment in 2017 and 2018 ...
title_fullStr Metadata and NCBI-Accession numbers of 16S data for seawater and Craniella sponges from the North Atlantic Ocean and an aquarium experiment in 2017 and 2018 ...
title_full_unstemmed Metadata and NCBI-Accession numbers of 16S data for seawater and Craniella sponges from the North Atlantic Ocean and an aquarium experiment in 2017 and 2018 ...
title_sort metadata and ncbi-accession numbers of 16s data for seawater and craniella sponges from the north atlantic ocean and an aquarium experiment in 2017 and 2018 ...
publisher PANGAEA
publishDate 2020
url https://dx.doi.org/10.1594/pangaea.913890
https://doi.pangaea.de/10.1594/PANGAEA.913890
genre North Atlantic
genre_facet North Atlantic
op_relation https://dx.doi.org/10.3389/fmars.2020.00674
https://dx.doi.org/10.1594/pangaea.918218
op_rights Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
cc-by-4.0
op_doi https://doi.org/10.1594/pangaea.91389010.3389/fmars.2020.0067410.1594/pangaea.918218
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