Seawater carbonate chemistry and coral calcification ...

Coral reefs are constructed by calcifiers that precipitate calcium carbonate to build their shells or skeletons through the process of calcification. Accurately assessing coral calcification rates is crucial to determine the health of these ecosystems and their response to major environmental change...

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Bibliographic Details
Main Authors: Gómez Batista, Miguel, Metian, Marc, Oberhänsli, F, Pouil, Simon, Tambutté, Eric, Gattuso, Jean-Pierre, Hernández, Carlos M Alonso, Gazeau, Frédéric
Format: Dataset
Language:English
Published: PANGAEA 2020
Subjects:
pH
Online Access:https://dx.doi.org/10.1594/pangaea.912222
https://doi.pangaea.de/10.1594/PANGAEA.912222
id ftdatacite:10.1594/pangaea.912222
record_format openpolar
spelling ftdatacite:10.1594/pangaea.912222 2024-02-27T08:44:16+00:00 Seawater carbonate chemistry and coral calcification ... Gómez Batista, Miguel Metian, Marc Oberhänsli, F Pouil, Simon Tambutté, Eric Gattuso, Jean-Pierre Hernández, Carlos M Alonso Gazeau, Frédéric 2020 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.912222 https://doi.pangaea.de/10.1594/PANGAEA.912222 en eng PANGAEA https://CRAN.R-project.org/package=seacarb https://dx.doi.org/10.5194/bg-17-887-2020 https://CRAN.R-project.org/package=seacarb Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 Animalia Benthic animals Bottles or small containers/Aquaria <20 L Calcification/Dissolution Cnidaria Laboratory experiment Laboratory strains Light Not applicable Single species Stylophora pistillata Type Species Registration number of species Uniform resource locator/link to reference Experiment Treatment Identification Date/time start Date/time end Incubation duration Size Mass Dry mass Salinity pH Alkalinity, total Alkalinity, total, standard deviation Calcium Calcium ion, standard deviation Calcium-45 activity Calcium-45 activity, standard deviation δ13C δ13C, standard deviation Calcification rate of calcium carbonate Calcification rate, standard error Temperature, water Temperature, water, standard deviation Carbonate system computation flag Carbon dioxide Carbon dioxide, standard deviation Fugacity of carbon dioxide water at sea surface temperature wet air Fugacity of carbon dioxide in seawater, standard deviation Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide, standard deviation Bicarbonate ion Bicarbonate ion, standard deviation Carbonate ion Carbonate ion, standard deviation Carbon, inorganic, dissolved dataset Dataset 2020 ftdatacite https://doi.org/10.1594/pangaea.91222210.5194/bg-17-887-2020 2024-02-01T15:26:49Z Coral reefs are constructed by calcifiers that precipitate calcium carbonate to build their shells or skeletons through the process of calcification. Accurately assessing coral calcification rates is crucial to determine the health of these ecosystems and their response to major environmental changes such as ocean warming and acidification. Several approaches have been used to assess rates of coral calcification but there is a real need to compare these approaches in order to ascertain that high quality and intercomparable results can be produced. Here, we assessed four methods (total alkalinity anomaly, calcium anomaly, 45Ca incorporation and 13C incorporation) to determine coral calcification of the reef-building coral Stylophora pistillata. Given the importance of environmental conditions on this process, the study was performed under two pH (ambient and low level) and two light (light and dark) conditions. Under all conditions, calcification rates estimated using the alkalinity and calcium anomaly ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2019) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-02-17. ... Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology)
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Animalia
Benthic animals
Bottles or small containers/Aquaria <20 L
Calcification/Dissolution
Cnidaria
Laboratory experiment
Laboratory strains
Light
Not applicable
Single species
Stylophora pistillata
Type
Species
Registration number of species
Uniform resource locator/link to reference
Experiment
Treatment
Identification
Date/time start
Date/time end
Incubation duration
Size
Mass
Dry mass
Salinity
pH
Alkalinity, total
Alkalinity, total, standard deviation
Calcium
Calcium ion, standard deviation
Calcium-45 activity
Calcium-45 activity, standard deviation
δ13C
δ13C, standard deviation
Calcification rate of calcium carbonate
Calcification rate, standard error
Temperature, water
Temperature, water, standard deviation
Carbonate system computation flag
Carbon dioxide
Carbon dioxide, standard deviation
Fugacity of carbon dioxide water at sea surface temperature wet air
Fugacity of carbon dioxide in seawater, standard deviation
Partial pressure of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide, standard deviation
Bicarbonate ion
Bicarbonate ion, standard deviation
Carbonate ion
Carbonate ion, standard deviation
Carbon, inorganic, dissolved
spellingShingle Animalia
Benthic animals
Bottles or small containers/Aquaria <20 L
Calcification/Dissolution
Cnidaria
Laboratory experiment
Laboratory strains
Light
Not applicable
Single species
Stylophora pistillata
Type
Species
Registration number of species
Uniform resource locator/link to reference
Experiment
Treatment
Identification
Date/time start
Date/time end
Incubation duration
Size
Mass
Dry mass
Salinity
pH
Alkalinity, total
Alkalinity, total, standard deviation
Calcium
Calcium ion, standard deviation
Calcium-45 activity
Calcium-45 activity, standard deviation
δ13C
δ13C, standard deviation
Calcification rate of calcium carbonate
Calcification rate, standard error
Temperature, water
Temperature, water, standard deviation
Carbonate system computation flag
Carbon dioxide
Carbon dioxide, standard deviation
Fugacity of carbon dioxide water at sea surface temperature wet air
Fugacity of carbon dioxide in seawater, standard deviation
Partial pressure of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide, standard deviation
Bicarbonate ion
Bicarbonate ion, standard deviation
Carbonate ion
Carbonate ion, standard deviation
Carbon, inorganic, dissolved
Gómez Batista, Miguel
Metian, Marc
Oberhänsli, F
Pouil, Simon
Tambutté, Eric
Gattuso, Jean-Pierre
Hernández, Carlos M Alonso
Gazeau, Frédéric
Seawater carbonate chemistry and coral calcification ...
topic_facet Animalia
Benthic animals
Bottles or small containers/Aquaria <20 L
Calcification/Dissolution
Cnidaria
Laboratory experiment
Laboratory strains
Light
Not applicable
Single species
Stylophora pistillata
Type
Species
Registration number of species
Uniform resource locator/link to reference
Experiment
Treatment
Identification
Date/time start
Date/time end
Incubation duration
Size
Mass
Dry mass
Salinity
pH
Alkalinity, total
Alkalinity, total, standard deviation
Calcium
Calcium ion, standard deviation
Calcium-45 activity
Calcium-45 activity, standard deviation
δ13C
δ13C, standard deviation
Calcification rate of calcium carbonate
Calcification rate, standard error
Temperature, water
Temperature, water, standard deviation
Carbonate system computation flag
Carbon dioxide
Carbon dioxide, standard deviation
Fugacity of carbon dioxide water at sea surface temperature wet air
Fugacity of carbon dioxide in seawater, standard deviation
Partial pressure of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide, standard deviation
Bicarbonate ion
Bicarbonate ion, standard deviation
Carbonate ion
Carbonate ion, standard deviation
Carbon, inorganic, dissolved
description Coral reefs are constructed by calcifiers that precipitate calcium carbonate to build their shells or skeletons through the process of calcification. Accurately assessing coral calcification rates is crucial to determine the health of these ecosystems and their response to major environmental changes such as ocean warming and acidification. Several approaches have been used to assess rates of coral calcification but there is a real need to compare these approaches in order to ascertain that high quality and intercomparable results can be produced. Here, we assessed four methods (total alkalinity anomaly, calcium anomaly, 45Ca incorporation and 13C incorporation) to determine coral calcification of the reef-building coral Stylophora pistillata. Given the importance of environmental conditions on this process, the study was performed under two pH (ambient and low level) and two light (light and dark) conditions. Under all conditions, calcification rates estimated using the alkalinity and calcium anomaly ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2019) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-02-17. ...
format Dataset
author Gómez Batista, Miguel
Metian, Marc
Oberhänsli, F
Pouil, Simon
Tambutté, Eric
Gattuso, Jean-Pierre
Hernández, Carlos M Alonso
Gazeau, Frédéric
author_facet Gómez Batista, Miguel
Metian, Marc
Oberhänsli, F
Pouil, Simon
Tambutté, Eric
Gattuso, Jean-Pierre
Hernández, Carlos M Alonso
Gazeau, Frédéric
author_sort Gómez Batista, Miguel
title Seawater carbonate chemistry and coral calcification ...
title_short Seawater carbonate chemistry and coral calcification ...
title_full Seawater carbonate chemistry and coral calcification ...
title_fullStr Seawater carbonate chemistry and coral calcification ...
title_full_unstemmed Seawater carbonate chemistry and coral calcification ...
title_sort seawater carbonate chemistry and coral calcification ...
publisher PANGAEA
publishDate 2020
url https://dx.doi.org/10.1594/pangaea.912222
https://doi.pangaea.de/10.1594/PANGAEA.912222
genre Ocean acidification
genre_facet Ocean acidification
op_relation https://CRAN.R-project.org/package=seacarb
https://dx.doi.org/10.5194/bg-17-887-2020
https://CRAN.R-project.org/package=seacarb
op_rights Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
cc-by-4.0
op_doi https://doi.org/10.1594/pangaea.91222210.5194/bg-17-887-2020
_version_ 1792052652211699712