Seawater carbonate chemistry and shell microstructure, mechanical properties of an edible estuarine oyster, supplement to: Meng, Yuan; Guo, Zhenbin; Yao, Haimin; Yeung, Kelvin W K; Thiyagarajan, Vengatesen (2019): Calcium carbonate unit realignment under acidification: A potential compensatory mechanism in an edible estuarine oyster. Marine Pollution Bulletin, 139, 141-149

Ocean acidification (OA) is well-known for impairing marine calcification; however, the end response of several essential species to this perturbation remains unknown. Decreased pH and saturation levels (Omega) of minerals under OA is projected to alter shell crystallography and thus to reduce shell...

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Main Authors: Meng, Yuan, Guo, Zhenbin, Yao, Haimin, Yeung, Kelvin W K, Thiyagarajan, Vengatesen
Format: Dataset
Language:English
Published: PANGAEA - Data Publisher for Earth & Environmental Science 2019
Subjects:
pH
Online Access:https://dx.doi.org/10.1594/pangaea.908459
https://doi.pangaea.de/10.1594/PANGAEA.908459
id ftdatacite:10.1594/pangaea.908459
record_format openpolar
spelling ftdatacite:10.1594/pangaea.908459 2023-05-15T17:50:41+02:00 Seawater carbonate chemistry and shell microstructure, mechanical properties of an edible estuarine oyster, supplement to: Meng, Yuan; Guo, Zhenbin; Yao, Haimin; Yeung, Kelvin W K; Thiyagarajan, Vengatesen (2019): Calcium carbonate unit realignment under acidification: A potential compensatory mechanism in an edible estuarine oyster. Marine Pollution Bulletin, 139, 141-149 Meng, Yuan Guo, Zhenbin Yao, Haimin Yeung, Kelvin W K Thiyagarajan, Vengatesen 2019 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.908459 https://doi.pangaea.de/10.1594/PANGAEA.908459 en eng PANGAEA - Data Publisher for Earth & Environmental Science https://CRAN.R-project.org/package=seacarb https://dx.doi.org/10.1016/j.marpolbul.2018.12.030 https://CRAN.R-project.org/package=seacarb Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 CC-BY Animalia Benthic animals Benthos Bottles or small containers/Aquaria <20 L Brackish waters Growth/Morphology Laboratory experiment Magallana hongkongensis Mollusca North Pacific Other studied parameter or process Single species Tropical Type Species Registration number of species Uniform resource locator/link to reference Treatment Area porosity Stiffness Hardness Density Volume pH pH, standard deviation Temperature, water Temperature, water, standard deviation Salinity Salinity, standard deviation Alkalinity, total Alkalinity, total, standard deviation Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide, standard deviation Carbonate ion Carbonate ion, standard deviation Calcite saturation state Calcite saturation state, standard deviation Aragonite saturation state Aragonite saturation state, standard deviation Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbon, inorganic, dissolved Experiment Potentiometric Potentiometric titration Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC Supplementary Dataset dataset Dataset 2019 ftdatacite https://doi.org/10.1594/pangaea.908459 https://doi.org/10.1016/j.marpolbul.2018.12.030 2021-11-05T12:55:41Z Ocean acidification (OA) is well-known for impairing marine calcification; however, the end response of several essential species to this perturbation remains unknown. Decreased pH and saturation levels (Omega) of minerals under OA is projected to alter shell crystallography and thus to reduce shell mechanical properties. This study examined this hypothesis using a commercially important estuarine oyster Magallana hongkongensis. Although shell damage occurred on the outmost prismatic layer and the undying myostracum at decreased pH 7.6 and 7.3, the major foliated layer was relatively unharmed. Oysters maintained their shell hardness and stiffness through altered crystal unit orientation under pH 7.6 conditions. However, under the undersaturated conditions (Omega Cal ~ 0.8) at pH 7.3, the realigned crystal units in foliated layer ultimately resulted in less stiff shells which indicated although estuarine oysters are mechanically resistant to unfavorable calcification conditions, extremely low pH condition is still a threat to this essential species. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2019) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2019-11-08. Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology) Pacific
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Animalia
Benthic animals
Benthos
Bottles or small containers/Aquaria <20 L
Brackish waters
Growth/Morphology
Laboratory experiment
Magallana hongkongensis
Mollusca
North Pacific
Other studied parameter or process
Single species
Tropical
Type
Species
Registration number of species
Uniform resource locator/link to reference
Treatment
Area porosity
Stiffness
Hardness
Density
Volume
pH
pH, standard deviation
Temperature, water
Temperature, water, standard deviation
Salinity
Salinity, standard deviation
Alkalinity, total
Alkalinity, total, standard deviation
Partial pressure of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide, standard deviation
Carbonate ion
Carbonate ion, standard deviation
Calcite saturation state
Calcite saturation state, standard deviation
Aragonite saturation state
Aragonite saturation state, standard deviation
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbon, inorganic, dissolved
Experiment
Potentiometric
Potentiometric titration
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
spellingShingle Animalia
Benthic animals
Benthos
Bottles or small containers/Aquaria <20 L
Brackish waters
Growth/Morphology
Laboratory experiment
Magallana hongkongensis
Mollusca
North Pacific
Other studied parameter or process
Single species
Tropical
Type
Species
Registration number of species
Uniform resource locator/link to reference
Treatment
Area porosity
Stiffness
Hardness
Density
Volume
pH
pH, standard deviation
Temperature, water
Temperature, water, standard deviation
Salinity
Salinity, standard deviation
Alkalinity, total
Alkalinity, total, standard deviation
Partial pressure of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide, standard deviation
Carbonate ion
Carbonate ion, standard deviation
Calcite saturation state
Calcite saturation state, standard deviation
Aragonite saturation state
Aragonite saturation state, standard deviation
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbon, inorganic, dissolved
Experiment
Potentiometric
Potentiometric titration
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
Meng, Yuan
Guo, Zhenbin
Yao, Haimin
Yeung, Kelvin W K
Thiyagarajan, Vengatesen
Seawater carbonate chemistry and shell microstructure, mechanical properties of an edible estuarine oyster, supplement to: Meng, Yuan; Guo, Zhenbin; Yao, Haimin; Yeung, Kelvin W K; Thiyagarajan, Vengatesen (2019): Calcium carbonate unit realignment under acidification: A potential compensatory mechanism in an edible estuarine oyster. Marine Pollution Bulletin, 139, 141-149
topic_facet Animalia
Benthic animals
Benthos
Bottles or small containers/Aquaria <20 L
Brackish waters
Growth/Morphology
Laboratory experiment
Magallana hongkongensis
Mollusca
North Pacific
Other studied parameter or process
Single species
Tropical
Type
Species
Registration number of species
Uniform resource locator/link to reference
Treatment
Area porosity
Stiffness
Hardness
Density
Volume
pH
pH, standard deviation
Temperature, water
Temperature, water, standard deviation
Salinity
Salinity, standard deviation
Alkalinity, total
Alkalinity, total, standard deviation
Partial pressure of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide, standard deviation
Carbonate ion
Carbonate ion, standard deviation
Calcite saturation state
Calcite saturation state, standard deviation
Aragonite saturation state
Aragonite saturation state, standard deviation
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbon, inorganic, dissolved
Experiment
Potentiometric
Potentiometric titration
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
description Ocean acidification (OA) is well-known for impairing marine calcification; however, the end response of several essential species to this perturbation remains unknown. Decreased pH and saturation levels (Omega) of minerals under OA is projected to alter shell crystallography and thus to reduce shell mechanical properties. This study examined this hypothesis using a commercially important estuarine oyster Magallana hongkongensis. Although shell damage occurred on the outmost prismatic layer and the undying myostracum at decreased pH 7.6 and 7.3, the major foliated layer was relatively unharmed. Oysters maintained their shell hardness and stiffness through altered crystal unit orientation under pH 7.6 conditions. However, under the undersaturated conditions (Omega Cal ~ 0.8) at pH 7.3, the realigned crystal units in foliated layer ultimately resulted in less stiff shells which indicated although estuarine oysters are mechanically resistant to unfavorable calcification conditions, extremely low pH condition is still a threat to this essential species. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2019) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2019-11-08.
format Dataset
author Meng, Yuan
Guo, Zhenbin
Yao, Haimin
Yeung, Kelvin W K
Thiyagarajan, Vengatesen
author_facet Meng, Yuan
Guo, Zhenbin
Yao, Haimin
Yeung, Kelvin W K
Thiyagarajan, Vengatesen
author_sort Meng, Yuan
title Seawater carbonate chemistry and shell microstructure, mechanical properties of an edible estuarine oyster, supplement to: Meng, Yuan; Guo, Zhenbin; Yao, Haimin; Yeung, Kelvin W K; Thiyagarajan, Vengatesen (2019): Calcium carbonate unit realignment under acidification: A potential compensatory mechanism in an edible estuarine oyster. Marine Pollution Bulletin, 139, 141-149
title_short Seawater carbonate chemistry and shell microstructure, mechanical properties of an edible estuarine oyster, supplement to: Meng, Yuan; Guo, Zhenbin; Yao, Haimin; Yeung, Kelvin W K; Thiyagarajan, Vengatesen (2019): Calcium carbonate unit realignment under acidification: A potential compensatory mechanism in an edible estuarine oyster. Marine Pollution Bulletin, 139, 141-149
title_full Seawater carbonate chemistry and shell microstructure, mechanical properties of an edible estuarine oyster, supplement to: Meng, Yuan; Guo, Zhenbin; Yao, Haimin; Yeung, Kelvin W K; Thiyagarajan, Vengatesen (2019): Calcium carbonate unit realignment under acidification: A potential compensatory mechanism in an edible estuarine oyster. Marine Pollution Bulletin, 139, 141-149
title_fullStr Seawater carbonate chemistry and shell microstructure, mechanical properties of an edible estuarine oyster, supplement to: Meng, Yuan; Guo, Zhenbin; Yao, Haimin; Yeung, Kelvin W K; Thiyagarajan, Vengatesen (2019): Calcium carbonate unit realignment under acidification: A potential compensatory mechanism in an edible estuarine oyster. Marine Pollution Bulletin, 139, 141-149
title_full_unstemmed Seawater carbonate chemistry and shell microstructure, mechanical properties of an edible estuarine oyster, supplement to: Meng, Yuan; Guo, Zhenbin; Yao, Haimin; Yeung, Kelvin W K; Thiyagarajan, Vengatesen (2019): Calcium carbonate unit realignment under acidification: A potential compensatory mechanism in an edible estuarine oyster. Marine Pollution Bulletin, 139, 141-149
title_sort seawater carbonate chemistry and shell microstructure, mechanical properties of an edible estuarine oyster, supplement to: meng, yuan; guo, zhenbin; yao, haimin; yeung, kelvin w k; thiyagarajan, vengatesen (2019): calcium carbonate unit realignment under acidification: a potential compensatory mechanism in an edible estuarine oyster. marine pollution bulletin, 139, 141-149
publisher PANGAEA - Data Publisher for Earth & Environmental Science
publishDate 2019
url https://dx.doi.org/10.1594/pangaea.908459
https://doi.pangaea.de/10.1594/PANGAEA.908459
geographic Pacific
geographic_facet Pacific
genre Ocean acidification
genre_facet Ocean acidification
op_relation https://CRAN.R-project.org/package=seacarb
https://dx.doi.org/10.1016/j.marpolbul.2018.12.030
https://CRAN.R-project.org/package=seacarb
op_rights Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
cc-by-4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.1594/pangaea.908459
https://doi.org/10.1016/j.marpolbul.2018.12.030
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