Seawater carbonate chemistry and photosynthesis and dark respiration of Thalassiosira weissflogii (diatom), supplement to: Li, Futian; Fan, Jiale; Hu, Lili; Beardall, John; Xu, Juntian (2019): Physiological and biochemical responses of Thalassiosira weissflogii (diatom) to seawater acidification and alkalization. ICES Journal of Marine Science

Increasing atmospheric pCO2 leads to seawater acidification, which has attracted considerable attention due to its potential impact on the marine biological carbon pump and function of marine ecosystems. Alternatively, phytoplankton cells living in coastal waters might experience increased pH/decrea...

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Bibliographic Details
Main Authors: Li, Futian, Fan, Jiale, Hu, Lili, Beardall, John, Xu, Juntian
Format: Dataset
Language:English
Published: PANGAEA - Data Publisher for Earth & Environmental Science 2019
Subjects:
pH
Online Access:https://dx.doi.org/10.1594/pangaea.907928
https://doi.pangaea.de/10.1594/PANGAEA.907928
id ftdatacite:10.1594/pangaea.907928
record_format openpolar
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria <20 L
Chromista
Growth/Morphology
Laboratory experiment
Laboratory strains
Not applicable
Pelagos
Phytoplankton
Primary production/Photosynthesis
Respiration
Single species
Thalassiosira weissflogii
Type
Species
Registration number of species
Uniform resource locator/link to reference
Treatment
Replicate
Growth rate
Chlorophyll a per cell
Biogenic silica, per cell
Change
Net oxygen evolution, per cell
Respiration rate, oxygen, dark per cell
Cell biovolume
Surface area
Cell surface area/cell volume ratio
Biogenic silica per surface area
Temperature, water
Salinity
pH
Alkalinity, total
Carbon, inorganic, dissolved
Bicarbonate ion
Carbon dioxide
Carbonate system computation flag
Fugacity of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide water at sea surface temperature wet air
Carbonate ion
Aragonite saturation state
Calcite saturation state
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
spellingShingle Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria <20 L
Chromista
Growth/Morphology
Laboratory experiment
Laboratory strains
Not applicable
Pelagos
Phytoplankton
Primary production/Photosynthesis
Respiration
Single species
Thalassiosira weissflogii
Type
Species
Registration number of species
Uniform resource locator/link to reference
Treatment
Replicate
Growth rate
Chlorophyll a per cell
Biogenic silica, per cell
Change
Net oxygen evolution, per cell
Respiration rate, oxygen, dark per cell
Cell biovolume
Surface area
Cell surface area/cell volume ratio
Biogenic silica per surface area
Temperature, water
Salinity
pH
Alkalinity, total
Carbon, inorganic, dissolved
Bicarbonate ion
Carbon dioxide
Carbonate system computation flag
Fugacity of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide water at sea surface temperature wet air
Carbonate ion
Aragonite saturation state
Calcite saturation state
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
Li, Futian
Fan, Jiale
Hu, Lili
Beardall, John
Xu, Juntian
Seawater carbonate chemistry and photosynthesis and dark respiration of Thalassiosira weissflogii (diatom), supplement to: Li, Futian; Fan, Jiale; Hu, Lili; Beardall, John; Xu, Juntian (2019): Physiological and biochemical responses of Thalassiosira weissflogii (diatom) to seawater acidification and alkalization. ICES Journal of Marine Science
topic_facet Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria <20 L
Chromista
Growth/Morphology
Laboratory experiment
Laboratory strains
Not applicable
Pelagos
Phytoplankton
Primary production/Photosynthesis
Respiration
Single species
Thalassiosira weissflogii
Type
Species
Registration number of species
Uniform resource locator/link to reference
Treatment
Replicate
Growth rate
Chlorophyll a per cell
Biogenic silica, per cell
Change
Net oxygen evolution, per cell
Respiration rate, oxygen, dark per cell
Cell biovolume
Surface area
Cell surface area/cell volume ratio
Biogenic silica per surface area
Temperature, water
Salinity
pH
Alkalinity, total
Carbon, inorganic, dissolved
Bicarbonate ion
Carbon dioxide
Carbonate system computation flag
Fugacity of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide water at sea surface temperature wet air
Carbonate ion
Aragonite saturation state
Calcite saturation state
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
description Increasing atmospheric pCO2 leads to seawater acidification, which has attracted considerable attention due to its potential impact on the marine biological carbon pump and function of marine ecosystems. Alternatively, phytoplankton cells living in coastal waters might experience increased pH/decreased pCO2 (seawater alkalization) caused by metabolic activities of other photoautotrophs, or after microalgal blooms. Here we grew Thalassiosira weissflogii (diatom) at seven pCO2 levels, including habitat-related lowered levels (25, 50, 100, and 200 µatm) as well as present-day (400 µatm) and elevated (800 and 1600 µatm) levels. Effects of seawater acidification and alkalization on growth, photosynthesis, dark respiration, cell geometry, and biogenic silica content of T. weissflogii were investigated. Elevated pCO2 and associated seawater acidification had no detectable effects. However, the lowered pCO2 levels (25-100 µatm), which might be experienced by coastal diatoms in post-bloom scenarios, significantly limited growth and photosynthesis of this species. In addition, seawater alkalization resulted in more silicified cells with higher dark respiration rates. Thus, a negative correlation of biogenic silica content and growth rate was evident over the pCO2 range tested here. Taken together, seawater alkalization, rather than acidification, could have stronger effects on the ballasting efficiency and carbon export of T. weissflogii. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2019) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2019-10-24.
format Dataset
author Li, Futian
Fan, Jiale
Hu, Lili
Beardall, John
Xu, Juntian
author_facet Li, Futian
Fan, Jiale
Hu, Lili
Beardall, John
Xu, Juntian
author_sort Li, Futian
title Seawater carbonate chemistry and photosynthesis and dark respiration of Thalassiosira weissflogii (diatom), supplement to: Li, Futian; Fan, Jiale; Hu, Lili; Beardall, John; Xu, Juntian (2019): Physiological and biochemical responses of Thalassiosira weissflogii (diatom) to seawater acidification and alkalization. ICES Journal of Marine Science
title_short Seawater carbonate chemistry and photosynthesis and dark respiration of Thalassiosira weissflogii (diatom), supplement to: Li, Futian; Fan, Jiale; Hu, Lili; Beardall, John; Xu, Juntian (2019): Physiological and biochemical responses of Thalassiosira weissflogii (diatom) to seawater acidification and alkalization. ICES Journal of Marine Science
title_full Seawater carbonate chemistry and photosynthesis and dark respiration of Thalassiosira weissflogii (diatom), supplement to: Li, Futian; Fan, Jiale; Hu, Lili; Beardall, John; Xu, Juntian (2019): Physiological and biochemical responses of Thalassiosira weissflogii (diatom) to seawater acidification and alkalization. ICES Journal of Marine Science
title_fullStr Seawater carbonate chemistry and photosynthesis and dark respiration of Thalassiosira weissflogii (diatom), supplement to: Li, Futian; Fan, Jiale; Hu, Lili; Beardall, John; Xu, Juntian (2019): Physiological and biochemical responses of Thalassiosira weissflogii (diatom) to seawater acidification and alkalization. ICES Journal of Marine Science
title_full_unstemmed Seawater carbonate chemistry and photosynthesis and dark respiration of Thalassiosira weissflogii (diatom), supplement to: Li, Futian; Fan, Jiale; Hu, Lili; Beardall, John; Xu, Juntian (2019): Physiological and biochemical responses of Thalassiosira weissflogii (diatom) to seawater acidification and alkalization. ICES Journal of Marine Science
title_sort seawater carbonate chemistry and photosynthesis and dark respiration of thalassiosira weissflogii (diatom), supplement to: li, futian; fan, jiale; hu, lili; beardall, john; xu, juntian (2019): physiological and biochemical responses of thalassiosira weissflogii (diatom) to seawater acidification and alkalization. ices journal of marine science
publisher PANGAEA - Data Publisher for Earth & Environmental Science
publishDate 2019
url https://dx.doi.org/10.1594/pangaea.907928
https://doi.pangaea.de/10.1594/PANGAEA.907928
genre Ocean acidification
genre_facet Ocean acidification
op_relation https://CRAN.R-project.org/package=seacarb
https://dx.doi.org/10.1093/icesjms/fsz028
https://CRAN.R-project.org/package=seacarb
op_rights Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
cc-by-4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.1594/pangaea.907928
https://doi.org/10.1093/icesjms/fsz028
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spelling ftdatacite:10.1594/pangaea.907928 2023-05-15T17:51:21+02:00 Seawater carbonate chemistry and photosynthesis and dark respiration of Thalassiosira weissflogii (diatom), supplement to: Li, Futian; Fan, Jiale; Hu, Lili; Beardall, John; Xu, Juntian (2019): Physiological and biochemical responses of Thalassiosira weissflogii (diatom) to seawater acidification and alkalization. ICES Journal of Marine Science Li, Futian Fan, Jiale Hu, Lili Beardall, John Xu, Juntian 2019 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.907928 https://doi.pangaea.de/10.1594/PANGAEA.907928 en eng PANGAEA - Data Publisher for Earth & Environmental Science https://CRAN.R-project.org/package=seacarb https://dx.doi.org/10.1093/icesjms/fsz028 https://CRAN.R-project.org/package=seacarb Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 CC-BY Biomass/Abundance/Elemental composition Bottles or small containers/Aquaria <20 L Chromista Growth/Morphology Laboratory experiment Laboratory strains Not applicable Pelagos Phytoplankton Primary production/Photosynthesis Respiration Single species Thalassiosira weissflogii Type Species Registration number of species Uniform resource locator/link to reference Treatment Replicate Growth rate Chlorophyll a per cell Biogenic silica, per cell Change Net oxygen evolution, per cell Respiration rate, oxygen, dark per cell Cell biovolume Surface area Cell surface area/cell volume ratio Biogenic silica per surface area Temperature, water Salinity pH Alkalinity, total Carbon, inorganic, dissolved Bicarbonate ion Carbon dioxide Carbonate system computation flag Fugacity of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide water at sea surface temperature wet air Carbonate ion Aragonite saturation state Calcite saturation state Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC Supplementary Dataset dataset Dataset 2019 ftdatacite https://doi.org/10.1594/pangaea.907928 https://doi.org/10.1093/icesjms/fsz028 2022-02-08T16:27:35Z Increasing atmospheric pCO2 leads to seawater acidification, which has attracted considerable attention due to its potential impact on the marine biological carbon pump and function of marine ecosystems. Alternatively, phytoplankton cells living in coastal waters might experience increased pH/decreased pCO2 (seawater alkalization) caused by metabolic activities of other photoautotrophs, or after microalgal blooms. Here we grew Thalassiosira weissflogii (diatom) at seven pCO2 levels, including habitat-related lowered levels (25, 50, 100, and 200 µatm) as well as present-day (400 µatm) and elevated (800 and 1600 µatm) levels. Effects of seawater acidification and alkalization on growth, photosynthesis, dark respiration, cell geometry, and biogenic silica content of T. weissflogii were investigated. Elevated pCO2 and associated seawater acidification had no detectable effects. However, the lowered pCO2 levels (25-100 µatm), which might be experienced by coastal diatoms in post-bloom scenarios, significantly limited growth and photosynthesis of this species. In addition, seawater alkalization resulted in more silicified cells with higher dark respiration rates. Thus, a negative correlation of biogenic silica content and growth rate was evident over the pCO2 range tested here. Taken together, seawater alkalization, rather than acidification, could have stronger effects on the ballasting efficiency and carbon export of T. weissflogii. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2019) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2019-10-24. Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology)