List of number of microsatellite repeats for fungus specific locus in stands of Cetraria aculeata, Usnea antarctica and U. aurantiacoatra ...
Eight consistently amplifying markers were used for Cetraria aculeata. Samples of Usnea aurantiacoatra and U. antarctica were genotyped using 21 and 22 microsatellites markers, respectively. Detailed information on primers and PCR amplification can be found in Lutsak et al. (2016) and Lagostina et a...
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Online Access: | https://dx.doi.org/10.1594/pangaea.906884 https://doi.pangaea.de/10.1594/PANGAEA.906884 |
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ftdatacite:10.1594/pangaea.906884 2024-03-31T07:49:18+00:00 List of number of microsatellite repeats for fungus specific locus in stands of Cetraria aculeata, Usnea antarctica and U. aurantiacoatra ... Lagostina, Elisa 2019 application/zip https://dx.doi.org/10.1594/pangaea.906884 https://doi.pangaea.de/10.1594/PANGAEA.906884 en eng PANGAEA Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 Biodiversity Cetraria aculeata Climate change Conservation microsatellites MigrateN Parmeliaceae Usnea antarctica Usnea aurantiacoatra Priority Programme 1158 Antarctic Research with Comparable Investigations in Arctic Sea Ice Areas SPP1158 Supplementary Publication Series of Datasets article Collection 2019 ftdatacite https://doi.org/10.1594/pangaea.906884 2024-03-04T13:34:28Z Eight consistently amplifying markers were used for Cetraria aculeata. Samples of Usnea aurantiacoatra and U. antarctica were genotyped using 21 and 22 microsatellites markers, respectively. Detailed information on primers and PCR amplification can be found in Lutsak et al. (2016) and Lagostina et al. (2017). PCR amplicons were electrophoresed using an Applied Biosystems 3730 sequencer, with the LIZ 500 (C. aculeata)or LIZ 600 (Usnea sp.) size standards (Applied Biosystems, Waltham, Mass., USA). Allele sizes were manually scored using the Geneious 10 microsatellites tool (Kearse et al. 2012). Those SSR markers were used to study the effects of dispersal strategy and phylogeographic history on the population genetic structure of Antarctic lichens. ... : Supplement to: Lagostina, Elisa; Dal Grande, Francesco; Scur, M; Lorenz, Andrea; Andreev, M; Ruprecht, U; Søchting, U; Sancho, L G; Wirtz, Nora; Rozzi, R; Printzen, Christian (in prep.): Genetic structure and gene flow of three lichens forming fungi in the Maritime Antarctic and southern South America. Journal of Biogeography ... Article in Journal/Newspaper Antarc* Antarctic Antarctica Arctic Climate change Sea ice Usnea antarctica DataCite Metadata Store (German National Library of Science and Technology) Antarctic Arctic |
institution |
Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
English |
topic |
Biodiversity Cetraria aculeata Climate change Conservation microsatellites MigrateN Parmeliaceae Usnea antarctica Usnea aurantiacoatra Priority Programme 1158 Antarctic Research with Comparable Investigations in Arctic Sea Ice Areas SPP1158 |
spellingShingle |
Biodiversity Cetraria aculeata Climate change Conservation microsatellites MigrateN Parmeliaceae Usnea antarctica Usnea aurantiacoatra Priority Programme 1158 Antarctic Research with Comparable Investigations in Arctic Sea Ice Areas SPP1158 Lagostina, Elisa List of number of microsatellite repeats for fungus specific locus in stands of Cetraria aculeata, Usnea antarctica and U. aurantiacoatra ... |
topic_facet |
Biodiversity Cetraria aculeata Climate change Conservation microsatellites MigrateN Parmeliaceae Usnea antarctica Usnea aurantiacoatra Priority Programme 1158 Antarctic Research with Comparable Investigations in Arctic Sea Ice Areas SPP1158 |
description |
Eight consistently amplifying markers were used for Cetraria aculeata. Samples of Usnea aurantiacoatra and U. antarctica were genotyped using 21 and 22 microsatellites markers, respectively. Detailed information on primers and PCR amplification can be found in Lutsak et al. (2016) and Lagostina et al. (2017). PCR amplicons were electrophoresed using an Applied Biosystems 3730 sequencer, with the LIZ 500 (C. aculeata)or LIZ 600 (Usnea sp.) size standards (Applied Biosystems, Waltham, Mass., USA). Allele sizes were manually scored using the Geneious 10 microsatellites tool (Kearse et al. 2012). Those SSR markers were used to study the effects of dispersal strategy and phylogeographic history on the population genetic structure of Antarctic lichens. ... : Supplement to: Lagostina, Elisa; Dal Grande, Francesco; Scur, M; Lorenz, Andrea; Andreev, M; Ruprecht, U; Søchting, U; Sancho, L G; Wirtz, Nora; Rozzi, R; Printzen, Christian (in prep.): Genetic structure and gene flow of three lichens forming fungi in the Maritime Antarctic and southern South America. Journal of Biogeography ... |
format |
Article in Journal/Newspaper |
author |
Lagostina, Elisa |
author_facet |
Lagostina, Elisa |
author_sort |
Lagostina, Elisa |
title |
List of number of microsatellite repeats for fungus specific locus in stands of Cetraria aculeata, Usnea antarctica and U. aurantiacoatra ... |
title_short |
List of number of microsatellite repeats for fungus specific locus in stands of Cetraria aculeata, Usnea antarctica and U. aurantiacoatra ... |
title_full |
List of number of microsatellite repeats for fungus specific locus in stands of Cetraria aculeata, Usnea antarctica and U. aurantiacoatra ... |
title_fullStr |
List of number of microsatellite repeats for fungus specific locus in stands of Cetraria aculeata, Usnea antarctica and U. aurantiacoatra ... |
title_full_unstemmed |
List of number of microsatellite repeats for fungus specific locus in stands of Cetraria aculeata, Usnea antarctica and U. aurantiacoatra ... |
title_sort |
list of number of microsatellite repeats for fungus specific locus in stands of cetraria aculeata, usnea antarctica and u. aurantiacoatra ... |
publisher |
PANGAEA |
publishDate |
2019 |
url |
https://dx.doi.org/10.1594/pangaea.906884 https://doi.pangaea.de/10.1594/PANGAEA.906884 |
geographic |
Antarctic Arctic |
geographic_facet |
Antarctic Arctic |
genre |
Antarc* Antarctic Antarctica Arctic Climate change Sea ice Usnea antarctica |
genre_facet |
Antarc* Antarctic Antarctica Arctic Climate change Sea ice Usnea antarctica |
op_rights |
Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 |
op_doi |
https://doi.org/10.1594/pangaea.906884 |
_version_ |
1795038467400400896 |