CARD-FISH cell counts of taxonomic bacterial and archaeal groups in Fram Strait during PS99.2

• Main Authors: Cardozo-Mino, Magda Guadalupe, Salman-Carvalho, Verena, Boetius, Antje, Fadeev, Eduard
• Format: Dataset
• Language: English
• Published: PANGAEA - Data Publisher for Earth & Environmental Science 2019
• Subjects: CARD-FISH; cell counts; Fram Strait; seawater; Event label; DEPTH, water; Microbial abundance, cells; Bacteria, targed with EUB338I-III oligonucleotide FISH-probe; Archaea, targed with ARCH915 oligonucleotide FISH-probe; Gammaproteobacteria, targeted with Gam42a oligonucleotide FISH-probe; Deltaproteobacteria, targeted with the DELTA495 mix oligonucleotide FISH-probes; Bacteroidetes, targeted with CF968 oligonucleotides FISH-probe; Chloroflexi, targeted with CFX1223 and GNSB941 oligonucleotides FISH-probe; Verrucomicrobiales, targeted with EUB338 III oligonucleotides FISH-probe; SAR11 mix oligonucleotide FISH-probes targeting SAR11 clade; Pseudoalteromonas, targeted with PSA184 oligonucleotide FISH-probe; SAR202 clade, targeted with SAR202-312R oligonucleotide FISH-probe; SAR406 clade, targeted with SAR406-97 oligonucleotide FISH-probe; SAR324 Marine group B, targeted with SAR324-R-625 oligonucleotide FISH-probe; Opitutales, targeted with OPI346 oligonucleotides FISH-probe; Crenarchaeota marine group I, targeted with Cren554 oligonucleotide FISH-probe; Polaribacter, targeted with POL740 oligonucleotides FISH-probe; Rhodobacteraceae, targeted with ROS536 oligonucleotides FISH-probe; CTD/Rosette with Underwater Vision Profiler; CTD/Rosette; Fluorescence determination of DAPI stain; Catalysed reporter deposition-fluorescence in situ hybridization CARD-FISH; PS99.2; Polarstern
• Online Access: https://dx.doi.org/10.1594/pangaea.905212; https://doi.pangaea.de/10.1594/PANGAEA.905212

With CARD-FISH we quantified 16 microbial taxonomic groups in different water depths, from surface to the deep sea. We investigated 11 stations in LTER-HAUSGARTEN and adjacent stations in Fram Strait.