CARD-FISH cell counts of taxonomic bacterial and archaeal groups in Fram Strait during PS99.2
With CARD-FISH we quantified 16 microbial taxonomic groups in different water depths, from surface to the deep sea. We investigated 11 stations in LTER-HAUSGARTEN and adjacent stations in Fram Strait.
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PANGAEA - Data Publisher for Earth & Environmental Science
2019
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Online Access: | https://dx.doi.org/10.1594/pangaea.905212 https://doi.pangaea.de/10.1594/PANGAEA.905212 |
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ftdatacite:10.1594/pangaea.905212 2023-05-15T16:18:03+02:00 CARD-FISH cell counts of taxonomic bacterial and archaeal groups in Fram Strait during PS99.2 Cardozo-Mino, Magda Guadalupe Salman-Carvalho, Verena Boetius, Antje Fadeev, Eduard 2019 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.905212 https://doi.pangaea.de/10.1594/PANGAEA.905212 en eng PANGAEA - Data Publisher for Earth & Environmental Science https://store.pangaea.de/Publications/Cardozo-etal_2019/Oligonucleotide-probes_Cardozo-etal_2019.pdf https://doi.pangaea.de/10.1594/PANGAEA.905210 https://store.pangaea.de/Publications/Cardozo-etal_2019/Oligonucleotide-probes_Cardozo-etal_2019.pdf https://doi.pangaea.de/10.1594/PANGAEA.905210 https://dx.doi.org/10.1594/pangaea.903569 Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 CC-BY CARD-FISH cell counts Fram Strait seawater Event label DEPTH, water Microbial abundance, cells Bacteria, targed with EUB338I-III oligonucleotide FISH-probe Archaea, targed with ARCH915 oligonucleotide FISH-probe Gammaproteobacteria, targeted with Gam42a oligonucleotide FISH-probe Deltaproteobacteria, targeted with the DELTA495 mix oligonucleotide FISH-probes Bacteroidetes, targeted with CF968 oligonucleotides FISH-probe Chloroflexi, targeted with CFX1223 and GNSB941 oligonucleotides FISH-probe Verrucomicrobiales, targeted with EUB338 III oligonucleotides FISH-probe SAR11 mix oligonucleotide FISH-probes targeting SAR11 clade Pseudoalteromonas, targeted with PSA184 oligonucleotide FISH-probe SAR202 clade, targeted with SAR202-312R oligonucleotide FISH-probe SAR406 clade, targeted with SAR406-97 oligonucleotide FISH-probe SAR324 Marine group B, targeted with SAR324-R-625 oligonucleotide FISH-probe Opitutales, targeted with OPI346 oligonucleotides FISH-probe Crenarchaeota marine group I, targeted with Cren554 oligonucleotide FISH-probe Polaribacter, targeted with POL740 oligonucleotides FISH-probe Rhodobacteraceae, targeted with ROS536 oligonucleotides FISH-probe CTD/Rosette with Underwater Vision Profiler CTD/Rosette Fluorescence determination of DAPI stain Catalysed reporter deposition-fluorescence in situ hybridization CARD-FISH PS99.2 Polarstern Dataset dataset 2019 ftdatacite https://doi.org/10.1594/pangaea.905212 https://doi.org/10.1594/pangaea.903569 2022-02-09T13:21:37Z With CARD-FISH we quantified 16 microbial taxonomic groups in different water depths, from surface to the deep sea. We investigated 11 stations in LTER-HAUSGARTEN and adjacent stations in Fram Strait. Dataset Fram Strait DataCite Metadata Store (German National Library of Science and Technology) |
institution |
Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
English |
topic |
CARD-FISH cell counts Fram Strait seawater Event label DEPTH, water Microbial abundance, cells Bacteria, targed with EUB338I-III oligonucleotide FISH-probe Archaea, targed with ARCH915 oligonucleotide FISH-probe Gammaproteobacteria, targeted with Gam42a oligonucleotide FISH-probe Deltaproteobacteria, targeted with the DELTA495 mix oligonucleotide FISH-probes Bacteroidetes, targeted with CF968 oligonucleotides FISH-probe Chloroflexi, targeted with CFX1223 and GNSB941 oligonucleotides FISH-probe Verrucomicrobiales, targeted with EUB338 III oligonucleotides FISH-probe SAR11 mix oligonucleotide FISH-probes targeting SAR11 clade Pseudoalteromonas, targeted with PSA184 oligonucleotide FISH-probe SAR202 clade, targeted with SAR202-312R oligonucleotide FISH-probe SAR406 clade, targeted with SAR406-97 oligonucleotide FISH-probe SAR324 Marine group B, targeted with SAR324-R-625 oligonucleotide FISH-probe Opitutales, targeted with OPI346 oligonucleotides FISH-probe Crenarchaeota marine group I, targeted with Cren554 oligonucleotide FISH-probe Polaribacter, targeted with POL740 oligonucleotides FISH-probe Rhodobacteraceae, targeted with ROS536 oligonucleotides FISH-probe CTD/Rosette with Underwater Vision Profiler CTD/Rosette Fluorescence determination of DAPI stain Catalysed reporter deposition-fluorescence in situ hybridization CARD-FISH PS99.2 Polarstern |
spellingShingle |
CARD-FISH cell counts Fram Strait seawater Event label DEPTH, water Microbial abundance, cells Bacteria, targed with EUB338I-III oligonucleotide FISH-probe Archaea, targed with ARCH915 oligonucleotide FISH-probe Gammaproteobacteria, targeted with Gam42a oligonucleotide FISH-probe Deltaproteobacteria, targeted with the DELTA495 mix oligonucleotide FISH-probes Bacteroidetes, targeted with CF968 oligonucleotides FISH-probe Chloroflexi, targeted with CFX1223 and GNSB941 oligonucleotides FISH-probe Verrucomicrobiales, targeted with EUB338 III oligonucleotides FISH-probe SAR11 mix oligonucleotide FISH-probes targeting SAR11 clade Pseudoalteromonas, targeted with PSA184 oligonucleotide FISH-probe SAR202 clade, targeted with SAR202-312R oligonucleotide FISH-probe SAR406 clade, targeted with SAR406-97 oligonucleotide FISH-probe SAR324 Marine group B, targeted with SAR324-R-625 oligonucleotide FISH-probe Opitutales, targeted with OPI346 oligonucleotides FISH-probe Crenarchaeota marine group I, targeted with Cren554 oligonucleotide FISH-probe Polaribacter, targeted with POL740 oligonucleotides FISH-probe Rhodobacteraceae, targeted with ROS536 oligonucleotides FISH-probe CTD/Rosette with Underwater Vision Profiler CTD/Rosette Fluorescence determination of DAPI stain Catalysed reporter deposition-fluorescence in situ hybridization CARD-FISH PS99.2 Polarstern Cardozo-Mino, Magda Guadalupe Salman-Carvalho, Verena Boetius, Antje Fadeev, Eduard CARD-FISH cell counts of taxonomic bacterial and archaeal groups in Fram Strait during PS99.2 |
topic_facet |
CARD-FISH cell counts Fram Strait seawater Event label DEPTH, water Microbial abundance, cells Bacteria, targed with EUB338I-III oligonucleotide FISH-probe Archaea, targed with ARCH915 oligonucleotide FISH-probe Gammaproteobacteria, targeted with Gam42a oligonucleotide FISH-probe Deltaproteobacteria, targeted with the DELTA495 mix oligonucleotide FISH-probes Bacteroidetes, targeted with CF968 oligonucleotides FISH-probe Chloroflexi, targeted with CFX1223 and GNSB941 oligonucleotides FISH-probe Verrucomicrobiales, targeted with EUB338 III oligonucleotides FISH-probe SAR11 mix oligonucleotide FISH-probes targeting SAR11 clade Pseudoalteromonas, targeted with PSA184 oligonucleotide FISH-probe SAR202 clade, targeted with SAR202-312R oligonucleotide FISH-probe SAR406 clade, targeted with SAR406-97 oligonucleotide FISH-probe SAR324 Marine group B, targeted with SAR324-R-625 oligonucleotide FISH-probe Opitutales, targeted with OPI346 oligonucleotides FISH-probe Crenarchaeota marine group I, targeted with Cren554 oligonucleotide FISH-probe Polaribacter, targeted with POL740 oligonucleotides FISH-probe Rhodobacteraceae, targeted with ROS536 oligonucleotides FISH-probe CTD/Rosette with Underwater Vision Profiler CTD/Rosette Fluorescence determination of DAPI stain Catalysed reporter deposition-fluorescence in situ hybridization CARD-FISH PS99.2 Polarstern |
description |
With CARD-FISH we quantified 16 microbial taxonomic groups in different water depths, from surface to the deep sea. We investigated 11 stations in LTER-HAUSGARTEN and adjacent stations in Fram Strait. |
format |
Dataset |
author |
Cardozo-Mino, Magda Guadalupe Salman-Carvalho, Verena Boetius, Antje Fadeev, Eduard |
author_facet |
Cardozo-Mino, Magda Guadalupe Salman-Carvalho, Verena Boetius, Antje Fadeev, Eduard |
author_sort |
Cardozo-Mino, Magda Guadalupe |
title |
CARD-FISH cell counts of taxonomic bacterial and archaeal groups in Fram Strait during PS99.2 |
title_short |
CARD-FISH cell counts of taxonomic bacterial and archaeal groups in Fram Strait during PS99.2 |
title_full |
CARD-FISH cell counts of taxonomic bacterial and archaeal groups in Fram Strait during PS99.2 |
title_fullStr |
CARD-FISH cell counts of taxonomic bacterial and archaeal groups in Fram Strait during PS99.2 |
title_full_unstemmed |
CARD-FISH cell counts of taxonomic bacterial and archaeal groups in Fram Strait during PS99.2 |
title_sort |
card-fish cell counts of taxonomic bacterial and archaeal groups in fram strait during ps99.2 |
publisher |
PANGAEA - Data Publisher for Earth & Environmental Science |
publishDate |
2019 |
url |
https://dx.doi.org/10.1594/pangaea.905212 https://doi.pangaea.de/10.1594/PANGAEA.905212 |
genre |
Fram Strait |
genre_facet |
Fram Strait |
op_relation |
https://store.pangaea.de/Publications/Cardozo-etal_2019/Oligonucleotide-probes_Cardozo-etal_2019.pdf https://doi.pangaea.de/10.1594/PANGAEA.905210 https://store.pangaea.de/Publications/Cardozo-etal_2019/Oligonucleotide-probes_Cardozo-etal_2019.pdf https://doi.pangaea.de/10.1594/PANGAEA.905210 https://dx.doi.org/10.1594/pangaea.903569 |
op_rights |
Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.1594/pangaea.905212 https://doi.org/10.1594/pangaea.903569 |
_version_ |
1766004106658316288 |