Seawater carbonate chemistry and growth, physiological performance of the Manila clam Ruditapes philippinarum, supplement to: Zhao, Liqiang; Yang, Feng; Milano, Stefania; Han, Tiankun; Walliser, Eric Otto; Schöne, Bernd R (2018): Transgenerational acclimation to seawater acidification in the Manila clam Ruditapes philippinarum: Preferential uptake of metabolic carbon. Science of the Total Environment, 627, 95-103

Ocean acidification may interfere with the calcifying physiology of marine bivalves. Therefore, understanding their capacity for acclimation and adaption to low pH over multiple generations is crucial to make predictions about the fate of this economically and ecologically important fauna in an acid...

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Main Authors: Zhao, Liqiang, Yang, Feng, Milano, Stefania, Han, Tiankun, Walliser, Eric Otto, Schöne, Bernd R
Format: Dataset
Language:English
Published: PANGAEA - Data Publisher for Earth & Environmental Science 2018
Subjects:
pH
Online Access:https://dx.doi.org/10.1594/pangaea.902985
https://doi.pangaea.de/10.1594/PANGAEA.902985
id ftdatacite:10.1594/pangaea.902985
record_format openpolar
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Animalia
Benthic animals
Benthos
Coast and continental shelf
Containers and aquaria 20-1000 L or < 1 m**2
Growth/Morphology
Laboratory experiment
Mollusca
North Pacific
Other studied parameter or process
Respiration
Ruditapes philippinarum
Single species
Temperate
Type
Species
Registration number of species
Uniform resource locator/link to reference
Treatment
Growth rate
Growth rate, standard deviation
Condition index
Condition index, standard deviation
Metabolic rate of oxygen
Metabolic rate of oxygen, standard deviation
δ13C
δ13C, standard deviation
Percentage
Temperature, water
Temperature, water, standard deviation
Salinity
Salinity, standard deviation
pH
pH, standard deviation
Alkalinity, total
Alkalinity, total, standard deviation
Partial pressure of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide, standard deviation
Carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard deviation
Bicarbonate ion
Bicarbonate ion, standard deviation
Carbonate ion
Carbonate ion, standard deviation
δ13C, dissolved inorganic carbon
δ13C, dissolved inorganic carbon, standard deviation
Carbonate system computation flag
Carbon dioxide
Carbon dioxide, standard deviation
Fugacity of carbon dioxide water at sea surface temperature wet air
Fugacity of carbon dioxide in seawater, standard deviation
Aragonite saturation state
Aragonite saturation state, standard deviation
Calcite saturation state
Calcite saturation state, standard deviation
Experiment
Calculated using seacarb after Nisumaa et al. 2010
Calculated using seacarb after Orr et al. 2018
Ocean Acidification International Coordination Centre OA-ICC
spellingShingle Animalia
Benthic animals
Benthos
Coast and continental shelf
Containers and aquaria 20-1000 L or < 1 m**2
Growth/Morphology
Laboratory experiment
Mollusca
North Pacific
Other studied parameter or process
Respiration
Ruditapes philippinarum
Single species
Temperate
Type
Species
Registration number of species
Uniform resource locator/link to reference
Treatment
Growth rate
Growth rate, standard deviation
Condition index
Condition index, standard deviation
Metabolic rate of oxygen
Metabolic rate of oxygen, standard deviation
δ13C
δ13C, standard deviation
Percentage
Temperature, water
Temperature, water, standard deviation
Salinity
Salinity, standard deviation
pH
pH, standard deviation
Alkalinity, total
Alkalinity, total, standard deviation
Partial pressure of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide, standard deviation
Carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard deviation
Bicarbonate ion
Bicarbonate ion, standard deviation
Carbonate ion
Carbonate ion, standard deviation
δ13C, dissolved inorganic carbon
δ13C, dissolved inorganic carbon, standard deviation
Carbonate system computation flag
Carbon dioxide
Carbon dioxide, standard deviation
Fugacity of carbon dioxide water at sea surface temperature wet air
Fugacity of carbon dioxide in seawater, standard deviation
Aragonite saturation state
Aragonite saturation state, standard deviation
Calcite saturation state
Calcite saturation state, standard deviation
Experiment
Calculated using seacarb after Nisumaa et al. 2010
Calculated using seacarb after Orr et al. 2018
Ocean Acidification International Coordination Centre OA-ICC
Zhao, Liqiang
Yang, Feng
Milano, Stefania
Han, Tiankun
Walliser, Eric Otto
Schöne, Bernd R
Seawater carbonate chemistry and growth, physiological performance of the Manila clam Ruditapes philippinarum, supplement to: Zhao, Liqiang; Yang, Feng; Milano, Stefania; Han, Tiankun; Walliser, Eric Otto; Schöne, Bernd R (2018): Transgenerational acclimation to seawater acidification in the Manila clam Ruditapes philippinarum: Preferential uptake of metabolic carbon. Science of the Total Environment, 627, 95-103
topic_facet Animalia
Benthic animals
Benthos
Coast and continental shelf
Containers and aquaria 20-1000 L or < 1 m**2
Growth/Morphology
Laboratory experiment
Mollusca
North Pacific
Other studied parameter or process
Respiration
Ruditapes philippinarum
Single species
Temperate
Type
Species
Registration number of species
Uniform resource locator/link to reference
Treatment
Growth rate
Growth rate, standard deviation
Condition index
Condition index, standard deviation
Metabolic rate of oxygen
Metabolic rate of oxygen, standard deviation
δ13C
δ13C, standard deviation
Percentage
Temperature, water
Temperature, water, standard deviation
Salinity
Salinity, standard deviation
pH
pH, standard deviation
Alkalinity, total
Alkalinity, total, standard deviation
Partial pressure of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide, standard deviation
Carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard deviation
Bicarbonate ion
Bicarbonate ion, standard deviation
Carbonate ion
Carbonate ion, standard deviation
δ13C, dissolved inorganic carbon
δ13C, dissolved inorganic carbon, standard deviation
Carbonate system computation flag
Carbon dioxide
Carbon dioxide, standard deviation
Fugacity of carbon dioxide water at sea surface temperature wet air
Fugacity of carbon dioxide in seawater, standard deviation
Aragonite saturation state
Aragonite saturation state, standard deviation
Calcite saturation state
Calcite saturation state, standard deviation
Experiment
Calculated using seacarb after Nisumaa et al. 2010
Calculated using seacarb after Orr et al. 2018
Ocean Acidification International Coordination Centre OA-ICC
description Ocean acidification may interfere with the calcifying physiology of marine bivalves. Therefore, understanding their capacity for acclimation and adaption to low pH over multiple generations is crucial to make predictions about the fate of this economically and ecologically important fauna in an acidifying ocean. Transgenerational exposure to an acidification scenario projected by the end of the century (i.e., pH 7.7) has been shown to confer resilience to juvenile offspring of the Manila clam, Ruditapes philippinarum. However, whether, and to what extent, this resilience can persist into adulthood are unknown and the mechanisms driving transgenerational acclimation remain poorly understood. The present study takes observations of Manila clam juveniles further into the adult stage and observes similar transgenerational responses. Under acidified conditions, clams originating from parents reproductively exposed to the same level of low pH show a significantly faster shell growth rate, a higher condition index and a lower standard metabolic rate than those without prior history of transgenerational acclimation. Further analyses of stable carbon isotopic signatures in dissolved inorganic carbon of seawater, individual soft tissues and shells reveal that up to 61% of shell carbonate comes from metabolic carbon, suggesting that transgenerationally acclimated clams may preferentially extract internal metabolic carbon rather than transport external seawater inorganic carbon to build shells, the latter known to be energetically expensive. While a large metabolic carbon contribution (45%) is seen in non-acclimated clams, a significant reduction in the rate of shell growth indicates it might occur at the expense of other calcification-relevant processes. It therefore seems plausible that, following transgenerational acclimation, R. philippinarum can implement a less costly and more efficient energy-utilizing strategy to mitigate the impact of seawater acidification. Collectively, our findings indicate that marine bivalves are more resilient to ocean acidification projected for the end of the century than previously thought. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2019-06-26.
format Dataset
author Zhao, Liqiang
Yang, Feng
Milano, Stefania
Han, Tiankun
Walliser, Eric Otto
Schöne, Bernd R
author_facet Zhao, Liqiang
Yang, Feng
Milano, Stefania
Han, Tiankun
Walliser, Eric Otto
Schöne, Bernd R
author_sort Zhao, Liqiang
title Seawater carbonate chemistry and growth, physiological performance of the Manila clam Ruditapes philippinarum, supplement to: Zhao, Liqiang; Yang, Feng; Milano, Stefania; Han, Tiankun; Walliser, Eric Otto; Schöne, Bernd R (2018): Transgenerational acclimation to seawater acidification in the Manila clam Ruditapes philippinarum: Preferential uptake of metabolic carbon. Science of the Total Environment, 627, 95-103
title_short Seawater carbonate chemistry and growth, physiological performance of the Manila clam Ruditapes philippinarum, supplement to: Zhao, Liqiang; Yang, Feng; Milano, Stefania; Han, Tiankun; Walliser, Eric Otto; Schöne, Bernd R (2018): Transgenerational acclimation to seawater acidification in the Manila clam Ruditapes philippinarum: Preferential uptake of metabolic carbon. Science of the Total Environment, 627, 95-103
title_full Seawater carbonate chemistry and growth, physiological performance of the Manila clam Ruditapes philippinarum, supplement to: Zhao, Liqiang; Yang, Feng; Milano, Stefania; Han, Tiankun; Walliser, Eric Otto; Schöne, Bernd R (2018): Transgenerational acclimation to seawater acidification in the Manila clam Ruditapes philippinarum: Preferential uptake of metabolic carbon. Science of the Total Environment, 627, 95-103
title_fullStr Seawater carbonate chemistry and growth, physiological performance of the Manila clam Ruditapes philippinarum, supplement to: Zhao, Liqiang; Yang, Feng; Milano, Stefania; Han, Tiankun; Walliser, Eric Otto; Schöne, Bernd R (2018): Transgenerational acclimation to seawater acidification in the Manila clam Ruditapes philippinarum: Preferential uptake of metabolic carbon. Science of the Total Environment, 627, 95-103
title_full_unstemmed Seawater carbonate chemistry and growth, physiological performance of the Manila clam Ruditapes philippinarum, supplement to: Zhao, Liqiang; Yang, Feng; Milano, Stefania; Han, Tiankun; Walliser, Eric Otto; Schöne, Bernd R (2018): Transgenerational acclimation to seawater acidification in the Manila clam Ruditapes philippinarum: Preferential uptake of metabolic carbon. Science of the Total Environment, 627, 95-103
title_sort seawater carbonate chemistry and growth, physiological performance of the manila clam ruditapes philippinarum, supplement to: zhao, liqiang; yang, feng; milano, stefania; han, tiankun; walliser, eric otto; schöne, bernd r (2018): transgenerational acclimation to seawater acidification in the manila clam ruditapes philippinarum: preferential uptake of metabolic carbon. science of the total environment, 627, 95-103
publisher PANGAEA - Data Publisher for Earth & Environmental Science
publishDate 2018
url https://dx.doi.org/10.1594/pangaea.902985
https://doi.pangaea.de/10.1594/PANGAEA.902985
geographic Pacific
geographic_facet Pacific
genre Ocean acidification
genre_facet Ocean acidification
op_relation https://CRAN.R-project.org/package=seacarb
https://dx.doi.org/10.1016/j.scitotenv.2018.01.225
https://CRAN.R-project.org/package=seacarb
op_rights Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
cc-by-4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.1594/pangaea.902985
https://doi.org/10.1016/j.scitotenv.2018.01.225
_version_ 1766157805789642752
spelling ftdatacite:10.1594/pangaea.902985 2023-05-15T17:50:53+02:00 Seawater carbonate chemistry and growth, physiological performance of the Manila clam Ruditapes philippinarum, supplement to: Zhao, Liqiang; Yang, Feng; Milano, Stefania; Han, Tiankun; Walliser, Eric Otto; Schöne, Bernd R (2018): Transgenerational acclimation to seawater acidification in the Manila clam Ruditapes philippinarum: Preferential uptake of metabolic carbon. Science of the Total Environment, 627, 95-103 Zhao, Liqiang Yang, Feng Milano, Stefania Han, Tiankun Walliser, Eric Otto Schöne, Bernd R 2018 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.902985 https://doi.pangaea.de/10.1594/PANGAEA.902985 en eng PANGAEA - Data Publisher for Earth & Environmental Science https://CRAN.R-project.org/package=seacarb https://dx.doi.org/10.1016/j.scitotenv.2018.01.225 https://CRAN.R-project.org/package=seacarb Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 CC-BY Animalia Benthic animals Benthos Coast and continental shelf Containers and aquaria 20-1000 L or < 1 m**2 Growth/Morphology Laboratory experiment Mollusca North Pacific Other studied parameter or process Respiration Ruditapes philippinarum Single species Temperate Type Species Registration number of species Uniform resource locator/link to reference Treatment Growth rate Growth rate, standard deviation Condition index Condition index, standard deviation Metabolic rate of oxygen Metabolic rate of oxygen, standard deviation δ13C δ13C, standard deviation Percentage Temperature, water Temperature, water, standard deviation Salinity Salinity, standard deviation pH pH, standard deviation Alkalinity, total Alkalinity, total, standard deviation Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide, standard deviation Carbon, inorganic, dissolved Carbon, inorganic, dissolved, standard deviation Bicarbonate ion Bicarbonate ion, standard deviation Carbonate ion Carbonate ion, standard deviation δ13C, dissolved inorganic carbon δ13C, dissolved inorganic carbon, standard deviation Carbonate system computation flag Carbon dioxide Carbon dioxide, standard deviation Fugacity of carbon dioxide water at sea surface temperature wet air Fugacity of carbon dioxide in seawater, standard deviation Aragonite saturation state Aragonite saturation state, standard deviation Calcite saturation state Calcite saturation state, standard deviation Experiment Calculated using seacarb after Nisumaa et al. 2010 Calculated using seacarb after Orr et al. 2018 Ocean Acidification International Coordination Centre OA-ICC Supplementary Dataset dataset Dataset 2018 ftdatacite https://doi.org/10.1594/pangaea.902985 https://doi.org/10.1016/j.scitotenv.2018.01.225 2021-11-05T12:55:41Z Ocean acidification may interfere with the calcifying physiology of marine bivalves. Therefore, understanding their capacity for acclimation and adaption to low pH over multiple generations is crucial to make predictions about the fate of this economically and ecologically important fauna in an acidifying ocean. Transgenerational exposure to an acidification scenario projected by the end of the century (i.e., pH 7.7) has been shown to confer resilience to juvenile offspring of the Manila clam, Ruditapes philippinarum. However, whether, and to what extent, this resilience can persist into adulthood are unknown and the mechanisms driving transgenerational acclimation remain poorly understood. The present study takes observations of Manila clam juveniles further into the adult stage and observes similar transgenerational responses. Under acidified conditions, clams originating from parents reproductively exposed to the same level of low pH show a significantly faster shell growth rate, a higher condition index and a lower standard metabolic rate than those without prior history of transgenerational acclimation. Further analyses of stable carbon isotopic signatures in dissolved inorganic carbon of seawater, individual soft tissues and shells reveal that up to 61% of shell carbonate comes from metabolic carbon, suggesting that transgenerationally acclimated clams may preferentially extract internal metabolic carbon rather than transport external seawater inorganic carbon to build shells, the latter known to be energetically expensive. While a large metabolic carbon contribution (45%) is seen in non-acclimated clams, a significant reduction in the rate of shell growth indicates it might occur at the expense of other calcification-relevant processes. It therefore seems plausible that, following transgenerational acclimation, R. philippinarum can implement a less costly and more efficient energy-utilizing strategy to mitigate the impact of seawater acidification. Collectively, our findings indicate that marine bivalves are more resilient to ocean acidification projected for the end of the century than previously thought. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2019-06-26. Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology) Pacific