Comparative Metabarcoding and Metatranscriptomic Analysis of Microeukaryotes Within Coastal Surface Waters of West Greenland and Northwest Iceland ...

Climate change alters environmental conditions that are expected to have a profound effect on the biodiversity, community composition, and metabolic processes of microeukaryotic plankton in Arctic and Subarctic coastal waters. The molecular biodiversity [large subunit (LSU) rRNA gene] of three plank...

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Bibliographic Details
Main Authors: Elferink, Stephanie, Wohlrab, Sylke, Neuhaus, Stefan, John, Uwe
Format: Article in Journal/Newspaper
Language:English
Published: PANGAEA 2019
Subjects:
Online Access:https://dx.doi.org/10.1594/pangaea.896952
https://doi.pangaea.de/10.1594/PANGAEA.896952
id ftdatacite:10.1594/pangaea.896952
record_format openpolar
spelling ftdatacite:10.1594/pangaea.896952 2024-09-09T19:22:04+00:00 Comparative Metabarcoding and Metatranscriptomic Analysis of Microeukaryotes Within Coastal Surface Waters of West Greenland and Northwest Iceland ... Elferink, Stephanie Wohlrab, Sylke Neuhaus, Stefan John, Uwe 2019 application/zip https://dx.doi.org/10.1594/pangaea.896952 https://doi.pangaea.de/10.1594/PANGAEA.896952 en eng PANGAEA https://dx.doi.org/10.3389/fmars.2020.00439 Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 arctic microplankton DNA-barcoding marine pelagic metabolic processes microeukaryotic community picoplankton Publication Series of Datasets Collection article 2019 ftdatacite https://doi.org/10.1594/pangaea.89695210.3389/fmars.2020.00439 2024-08-01T10:57:41Z Climate change alters environmental conditions that are expected to have a profound effect on the biodiversity, community composition, and metabolic processes of microeukaryotic plankton in Arctic and Subarctic coastal waters. The molecular biodiversity [large subunit (LSU) rRNA gene] of three plankton size-fractions (micro-, nano-, and picoplankton) from coastal waters of ice-influenced west Greenland was compared with fractions from ice-free northwest Iceland within their summer environmental context. Putative metabolic functions were determined by differentially expressed mRNA (metatranscriptomics) of the microplankton. Temperature and salinity variations were more closely correlated than inorganic macronutrients with metabolic functions and community composition. Temperature explained much of the community variance, approximately 20% among micro- and nanoplankton, whereas other environmental factors accounted for rather low fractional variance (<7%). Species of smaller cell-size were more evenly ... Article in Journal/Newspaper Arctic Climate change Greenland Iceland Subarctic DataCite Arctic Greenland
institution Open Polar
collection DataCite
op_collection_id ftdatacite
language English
topic arctic microplankton
DNA-barcoding
marine pelagic
metabolic processes
microeukaryotic community
picoplankton
spellingShingle arctic microplankton
DNA-barcoding
marine pelagic
metabolic processes
microeukaryotic community
picoplankton
Elferink, Stephanie
Wohlrab, Sylke
Neuhaus, Stefan
John, Uwe
Comparative Metabarcoding and Metatranscriptomic Analysis of Microeukaryotes Within Coastal Surface Waters of West Greenland and Northwest Iceland ...
topic_facet arctic microplankton
DNA-barcoding
marine pelagic
metabolic processes
microeukaryotic community
picoplankton
description Climate change alters environmental conditions that are expected to have a profound effect on the biodiversity, community composition, and metabolic processes of microeukaryotic plankton in Arctic and Subarctic coastal waters. The molecular biodiversity [large subunit (LSU) rRNA gene] of three plankton size-fractions (micro-, nano-, and picoplankton) from coastal waters of ice-influenced west Greenland was compared with fractions from ice-free northwest Iceland within their summer environmental context. Putative metabolic functions were determined by differentially expressed mRNA (metatranscriptomics) of the microplankton. Temperature and salinity variations were more closely correlated than inorganic macronutrients with metabolic functions and community composition. Temperature explained much of the community variance, approximately 20% among micro- and nanoplankton, whereas other environmental factors accounted for rather low fractional variance (<7%). Species of smaller cell-size were more evenly ...
format Article in Journal/Newspaper
author Elferink, Stephanie
Wohlrab, Sylke
Neuhaus, Stefan
John, Uwe
author_facet Elferink, Stephanie
Wohlrab, Sylke
Neuhaus, Stefan
John, Uwe
author_sort Elferink, Stephanie
title Comparative Metabarcoding and Metatranscriptomic Analysis of Microeukaryotes Within Coastal Surface Waters of West Greenland and Northwest Iceland ...
title_short Comparative Metabarcoding and Metatranscriptomic Analysis of Microeukaryotes Within Coastal Surface Waters of West Greenland and Northwest Iceland ...
title_full Comparative Metabarcoding and Metatranscriptomic Analysis of Microeukaryotes Within Coastal Surface Waters of West Greenland and Northwest Iceland ...
title_fullStr Comparative Metabarcoding and Metatranscriptomic Analysis of Microeukaryotes Within Coastal Surface Waters of West Greenland and Northwest Iceland ...
title_full_unstemmed Comparative Metabarcoding and Metatranscriptomic Analysis of Microeukaryotes Within Coastal Surface Waters of West Greenland and Northwest Iceland ...
title_sort comparative metabarcoding and metatranscriptomic analysis of microeukaryotes within coastal surface waters of west greenland and northwest iceland ...
publisher PANGAEA
publishDate 2019
url https://dx.doi.org/10.1594/pangaea.896952
https://doi.pangaea.de/10.1594/PANGAEA.896952
geographic Arctic
Greenland
geographic_facet Arctic
Greenland
genre Arctic
Climate change
Greenland
Iceland
Subarctic
genre_facet Arctic
Climate change
Greenland
Iceland
Subarctic
op_relation https://dx.doi.org/10.3389/fmars.2020.00439
op_rights Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
cc-by-4.0
op_doi https://doi.org/10.1594/pangaea.89695210.3389/fmars.2020.00439
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