Seawater carbonate chemistry and the amount of reads gained from small RNA sequencing of Anemonia viridis, supplement to: Urbarova, Ilona; Patel, Hardip; Forêt, S; Karlsen, Bard Ove; Jørgensen, Tor Erik; Hall-Spencer, Jason M; Johansen, Steinar D (2018): Elucidating the Small Regulatory RNA Repertoire of the Sea Anemone Anemonia viridis Based on Whole Genome and Small RNA Sequencing. Genome Biology and Evolution, 10(2), 410-426

• Main Authors: Urbarova, Ilona, Patel, Hardip, Forêt, S, Karlsen, Bard Ove, Jørgensen, Tor Erik, Hall-Spencer, Jason M, Johansen, Steinar D
• Format: Dataset
• Language: English
• Published: PANGAEA - Data Publisher for Earth & Environmental Science 2018
• Subjects: Anemonia viridis; Animalia; Benthic animals; Benthos; Cnidaria; CO2 vent; Coast and continental shelf; Field observation; Gene expression incl. proteomics; Mediterranean Sea; Single species; Temperate; Type; Species; Registration number of species; Uniform resource locator/link to reference; Identification; Reads; Percentage; Temperature, water; Temperature, water, standard deviation; Salinity; Salinity, standard deviation; pH; pH, standard deviation; Alkalinity, total; Partial pressure of carbon dioxide water at sea surface temperature wet air; Partial pressure of carbon dioxide, standard deviation; Carbon dioxide; Carbon dioxide, standard deviation; Carbon, inorganic, dissolved; Carbon, inorganic, dissolved, standard deviation; Bicarbonate ion; Bicarbonate ion, standard deviation; Carbonate system computation flag; Fugacity of carbon dioxide water at sea surface temperature wet air; Carbonate ion; Aragonite saturation state; Calcite saturation state; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. 2010; Ocean Acidification International Coordination Centre OA-ICC; Johansen; Karlsen; Ocean acidification
• Online Access: https://dx.doi.org/10.1594/pangaea.892842; https://doi.pangaea.de/10.1594/PANGAEA.892842

Cnidarians harbor a variety of small regulatory RNAs that include microRNAs (miRNAs) and PIWI-interacting RNAs (piRNAs), but detailed information is limited. Here, we report the identification and expression of novel miRNAs and putative piRNAs, as well as their genomic loci, in the symbiotic sea ane...