Seawater carbonate chemistry and calcifying fluid carbonate chemistry, calcification of coral, supplement to: Schoepf, Verena; Jury, Christopher P; Toonen, Robert J; McCulloch, Malcolm T (2017): Coral calcification mechanisms facilitate adaptive responses to ocean acidification. Proceedings of the Royal Society B-Biological Sciences, 284(1868), 20172117
Ocean acidification (OA) is a pressing threat to reef-building corals, but it remains poorly understood how coral calcification is inhibited by OA and whether corals could acclimatize and/or adapt to OA. Using a novel geochemical approach, we reconstructed the carbonate chemistry of the calcifying f...
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ftdatacite:10.1594/pangaea.891559 2023-05-15T17:50:25+02:00 Seawater carbonate chemistry and calcifying fluid carbonate chemistry, calcification of coral, supplement to: Schoepf, Verena; Jury, Christopher P; Toonen, Robert J; McCulloch, Malcolm T (2017): Coral calcification mechanisms facilitate adaptive responses to ocean acidification. Proceedings of the Royal Society B-Biological Sciences, 284(1868), 20172117 Schoepf, Verena Jury, Christopher P Toonen, Robert J McCulloch, Malcolm T 2017 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.891559 https://doi.pangaea.de/10.1594/PANGAEA.891559 en eng PANGAEA - Data Publisher for Earth & Environmental Science https://cran.r-project.org/package=seacarb https://dx.doi.org/10.1098/rspb.2017.2117 https://cran.r-project.org/package=seacarb Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 CC-BY Acid-base regulation Animalia Benthic animals Benthos Calcification/Dissolution Cnidaria Coast and continental shelf Laboratory experiment Montipora capitata North Pacific Other studied parameter or process Porites compressa Single species Temperature Tropical Event label Type Species Registration number of species Uniform resource locator/link to reference Experiment duration Identification Site Temperature, water Partial pressure of carbon dioxide water at sea surface temperature wet air Salinity pH Alkalinity, total δ11B Calcifying fluid, pH pH change Boron/Calcium ratio Calcifying fluid, dissolved inorganic carbon Ratio Calcifying fluid, carbonate ion Calcifying fluid, aragonite saturation state Calcification rate of calcium carbonate Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbonate ion Carbon, inorganic, dissolved Aragonite saturation state Calcite saturation state Experiment Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC Supplementary Dataset dataset Dataset 2017 ftdatacite https://doi.org/10.1594/pangaea.891559 https://doi.org/10.1098/rspb.2017.2117 2021-11-05T12:55:41Z Ocean acidification (OA) is a pressing threat to reef-building corals, but it remains poorly understood how coral calcification is inhibited by OA and whether corals could acclimatize and/or adapt to OA. Using a novel geochemical approach, we reconstructed the carbonate chemistry of the calcifying fluid in two coral species using both a pH and dissolved inorganic carbon (DIC) proxy (delta 11B and B/Ca, respectively). To address the potential for adaptive responses, both species were collected from two sites spanning a natural gradient in seawater pH and temperature, and then subjected to three pHT levels (8.04, 7.88, 7.71) crossed by two temperatures (control, +1.5°C) for 14 weeks. Corals from the site with naturally lower seawater pH calcified faster and maintained growth better under simulated OA than corals from the higher-pH site. This ability was consistently linked to higher pH yet lower DIC values in the calcifying fluid, suggesting that these differences are the result of long-term acclimatization and/or local adaptation to naturally lower seawater pH. Nevertheless, all corals elevated both pH and DIC significantly over seawater values, even under OA. This implies that high pH upregulation combined with moderate levels of DIC upregulation promote resistance and adaptive responses of coral calcification to OA. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2018-05-23. Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology) Pacific |
institution |
Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
English |
topic |
Acid-base regulation Animalia Benthic animals Benthos Calcification/Dissolution Cnidaria Coast and continental shelf Laboratory experiment Montipora capitata North Pacific Other studied parameter or process Porites compressa Single species Temperature Tropical Event label Type Species Registration number of species Uniform resource locator/link to reference Experiment duration Identification Site Temperature, water Partial pressure of carbon dioxide water at sea surface temperature wet air Salinity pH Alkalinity, total δ11B Calcifying fluid, pH pH change Boron/Calcium ratio Calcifying fluid, dissolved inorganic carbon Ratio Calcifying fluid, carbonate ion Calcifying fluid, aragonite saturation state Calcification rate of calcium carbonate Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbonate ion Carbon, inorganic, dissolved Aragonite saturation state Calcite saturation state Experiment Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC |
spellingShingle |
Acid-base regulation Animalia Benthic animals Benthos Calcification/Dissolution Cnidaria Coast and continental shelf Laboratory experiment Montipora capitata North Pacific Other studied parameter or process Porites compressa Single species Temperature Tropical Event label Type Species Registration number of species Uniform resource locator/link to reference Experiment duration Identification Site Temperature, water Partial pressure of carbon dioxide water at sea surface temperature wet air Salinity pH Alkalinity, total δ11B Calcifying fluid, pH pH change Boron/Calcium ratio Calcifying fluid, dissolved inorganic carbon Ratio Calcifying fluid, carbonate ion Calcifying fluid, aragonite saturation state Calcification rate of calcium carbonate Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbonate ion Carbon, inorganic, dissolved Aragonite saturation state Calcite saturation state Experiment Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC Schoepf, Verena Jury, Christopher P Toonen, Robert J McCulloch, Malcolm T Seawater carbonate chemistry and calcifying fluid carbonate chemistry, calcification of coral, supplement to: Schoepf, Verena; Jury, Christopher P; Toonen, Robert J; McCulloch, Malcolm T (2017): Coral calcification mechanisms facilitate adaptive responses to ocean acidification. Proceedings of the Royal Society B-Biological Sciences, 284(1868), 20172117 |
topic_facet |
Acid-base regulation Animalia Benthic animals Benthos Calcification/Dissolution Cnidaria Coast and continental shelf Laboratory experiment Montipora capitata North Pacific Other studied parameter or process Porites compressa Single species Temperature Tropical Event label Type Species Registration number of species Uniform resource locator/link to reference Experiment duration Identification Site Temperature, water Partial pressure of carbon dioxide water at sea surface temperature wet air Salinity pH Alkalinity, total δ11B Calcifying fluid, pH pH change Boron/Calcium ratio Calcifying fluid, dissolved inorganic carbon Ratio Calcifying fluid, carbonate ion Calcifying fluid, aragonite saturation state Calcification rate of calcium carbonate Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbonate ion Carbon, inorganic, dissolved Aragonite saturation state Calcite saturation state Experiment Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC |
description |
Ocean acidification (OA) is a pressing threat to reef-building corals, but it remains poorly understood how coral calcification is inhibited by OA and whether corals could acclimatize and/or adapt to OA. Using a novel geochemical approach, we reconstructed the carbonate chemistry of the calcifying fluid in two coral species using both a pH and dissolved inorganic carbon (DIC) proxy (delta 11B and B/Ca, respectively). To address the potential for adaptive responses, both species were collected from two sites spanning a natural gradient in seawater pH and temperature, and then subjected to three pHT levels (8.04, 7.88, 7.71) crossed by two temperatures (control, +1.5°C) for 14 weeks. Corals from the site with naturally lower seawater pH calcified faster and maintained growth better under simulated OA than corals from the higher-pH site. This ability was consistently linked to higher pH yet lower DIC values in the calcifying fluid, suggesting that these differences are the result of long-term acclimatization and/or local adaptation to naturally lower seawater pH. Nevertheless, all corals elevated both pH and DIC significantly over seawater values, even under OA. This implies that high pH upregulation combined with moderate levels of DIC upregulation promote resistance and adaptive responses of coral calcification to OA. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2018-05-23. |
format |
Dataset |
author |
Schoepf, Verena Jury, Christopher P Toonen, Robert J McCulloch, Malcolm T |
author_facet |
Schoepf, Verena Jury, Christopher P Toonen, Robert J McCulloch, Malcolm T |
author_sort |
Schoepf, Verena |
title |
Seawater carbonate chemistry and calcifying fluid carbonate chemistry, calcification of coral, supplement to: Schoepf, Verena; Jury, Christopher P; Toonen, Robert J; McCulloch, Malcolm T (2017): Coral calcification mechanisms facilitate adaptive responses to ocean acidification. Proceedings of the Royal Society B-Biological Sciences, 284(1868), 20172117 |
title_short |
Seawater carbonate chemistry and calcifying fluid carbonate chemistry, calcification of coral, supplement to: Schoepf, Verena; Jury, Christopher P; Toonen, Robert J; McCulloch, Malcolm T (2017): Coral calcification mechanisms facilitate adaptive responses to ocean acidification. Proceedings of the Royal Society B-Biological Sciences, 284(1868), 20172117 |
title_full |
Seawater carbonate chemistry and calcifying fluid carbonate chemistry, calcification of coral, supplement to: Schoepf, Verena; Jury, Christopher P; Toonen, Robert J; McCulloch, Malcolm T (2017): Coral calcification mechanisms facilitate adaptive responses to ocean acidification. Proceedings of the Royal Society B-Biological Sciences, 284(1868), 20172117 |
title_fullStr |
Seawater carbonate chemistry and calcifying fluid carbonate chemistry, calcification of coral, supplement to: Schoepf, Verena; Jury, Christopher P; Toonen, Robert J; McCulloch, Malcolm T (2017): Coral calcification mechanisms facilitate adaptive responses to ocean acidification. Proceedings of the Royal Society B-Biological Sciences, 284(1868), 20172117 |
title_full_unstemmed |
Seawater carbonate chemistry and calcifying fluid carbonate chemistry, calcification of coral, supplement to: Schoepf, Verena; Jury, Christopher P; Toonen, Robert J; McCulloch, Malcolm T (2017): Coral calcification mechanisms facilitate adaptive responses to ocean acidification. Proceedings of the Royal Society B-Biological Sciences, 284(1868), 20172117 |
title_sort |
seawater carbonate chemistry and calcifying fluid carbonate chemistry, calcification of coral, supplement to: schoepf, verena; jury, christopher p; toonen, robert j; mcculloch, malcolm t (2017): coral calcification mechanisms facilitate adaptive responses to ocean acidification. proceedings of the royal society b-biological sciences, 284(1868), 20172117 |
publisher |
PANGAEA - Data Publisher for Earth & Environmental Science |
publishDate |
2017 |
url |
https://dx.doi.org/10.1594/pangaea.891559 https://doi.pangaea.de/10.1594/PANGAEA.891559 |
geographic |
Pacific |
geographic_facet |
Pacific |
genre |
Ocean acidification |
genre_facet |
Ocean acidification |
op_relation |
https://cran.r-project.org/package=seacarb https://dx.doi.org/10.1098/rspb.2017.2117 https://cran.r-project.org/package=seacarb |
op_rights |
Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.1594/pangaea.891559 https://doi.org/10.1098/rspb.2017.2117 |
_version_ |
1766157163063934976 |