Seawater carbonate chemistry and calcifying fluid carbonate chemistry, calcification of coral, supplement to: Schoepf, Verena; Jury, Christopher P; Toonen, Robert J; McCulloch, Malcolm T (2017): Coral calcification mechanisms facilitate adaptive responses to ocean acidification. Proceedings of the Royal Society B-Biological Sciences, 284(1868), 20172117

Ocean acidification (OA) is a pressing threat to reef-building corals, but it remains poorly understood how coral calcification is inhibited by OA and whether corals could acclimatize and/or adapt to OA. Using a novel geochemical approach, we reconstructed the carbonate chemistry of the calcifying f...

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Main Authors: Schoepf, Verena, Jury, Christopher P, Toonen, Robert J, McCulloch, Malcolm T
Format: Dataset
Language:English
Published: PANGAEA - Data Publisher for Earth & Environmental Science 2017
Subjects:
pH
Online Access:https://dx.doi.org/10.1594/pangaea.891559
https://doi.pangaea.de/10.1594/PANGAEA.891559
id ftdatacite:10.1594/pangaea.891559
record_format openpolar
spelling ftdatacite:10.1594/pangaea.891559 2023-05-15T17:50:25+02:00 Seawater carbonate chemistry and calcifying fluid carbonate chemistry, calcification of coral, supplement to: Schoepf, Verena; Jury, Christopher P; Toonen, Robert J; McCulloch, Malcolm T (2017): Coral calcification mechanisms facilitate adaptive responses to ocean acidification. Proceedings of the Royal Society B-Biological Sciences, 284(1868), 20172117 Schoepf, Verena Jury, Christopher P Toonen, Robert J McCulloch, Malcolm T 2017 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.891559 https://doi.pangaea.de/10.1594/PANGAEA.891559 en eng PANGAEA - Data Publisher for Earth & Environmental Science https://cran.r-project.org/package=seacarb https://dx.doi.org/10.1098/rspb.2017.2117 https://cran.r-project.org/package=seacarb Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 CC-BY Acid-base regulation Animalia Benthic animals Benthos Calcification/Dissolution Cnidaria Coast and continental shelf Laboratory experiment Montipora capitata North Pacific Other studied parameter or process Porites compressa Single species Temperature Tropical Event label Type Species Registration number of species Uniform resource locator/link to reference Experiment duration Identification Site Temperature, water Partial pressure of carbon dioxide water at sea surface temperature wet air Salinity pH Alkalinity, total δ11B Calcifying fluid, pH pH change Boron/Calcium ratio Calcifying fluid, dissolved inorganic carbon Ratio Calcifying fluid, carbonate ion Calcifying fluid, aragonite saturation state Calcification rate of calcium carbonate Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbonate ion Carbon, inorganic, dissolved Aragonite saturation state Calcite saturation state Experiment Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC Supplementary Dataset dataset Dataset 2017 ftdatacite https://doi.org/10.1594/pangaea.891559 https://doi.org/10.1098/rspb.2017.2117 2021-11-05T12:55:41Z Ocean acidification (OA) is a pressing threat to reef-building corals, but it remains poorly understood how coral calcification is inhibited by OA and whether corals could acclimatize and/or adapt to OA. Using a novel geochemical approach, we reconstructed the carbonate chemistry of the calcifying fluid in two coral species using both a pH and dissolved inorganic carbon (DIC) proxy (delta 11B and B/Ca, respectively). To address the potential for adaptive responses, both species were collected from two sites spanning a natural gradient in seawater pH and temperature, and then subjected to three pHT levels (8.04, 7.88, 7.71) crossed by two temperatures (control, +1.5°C) for 14 weeks. Corals from the site with naturally lower seawater pH calcified faster and maintained growth better under simulated OA than corals from the higher-pH site. This ability was consistently linked to higher pH yet lower DIC values in the calcifying fluid, suggesting that these differences are the result of long-term acclimatization and/or local adaptation to naturally lower seawater pH. Nevertheless, all corals elevated both pH and DIC significantly over seawater values, even under OA. This implies that high pH upregulation combined with moderate levels of DIC upregulation promote resistance and adaptive responses of coral calcification to OA. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2018-05-23. Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology) Pacific
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Acid-base regulation
Animalia
Benthic animals
Benthos
Calcification/Dissolution
Cnidaria
Coast and continental shelf
Laboratory experiment
Montipora capitata
North Pacific
Other studied parameter or process
Porites compressa
Single species
Temperature
Tropical
Event label
Type
Species
Registration number of species
Uniform resource locator/link to reference
Experiment duration
Identification
Site
Temperature, water
Partial pressure of carbon dioxide water at sea surface temperature wet air
Salinity
pH
Alkalinity, total
δ11B
Calcifying fluid, pH
pH change
Boron/Calcium ratio
Calcifying fluid, dissolved inorganic carbon
Ratio
Calcifying fluid, carbonate ion
Calcifying fluid, aragonite saturation state
Calcification rate of calcium carbonate
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Carbon, inorganic, dissolved
Aragonite saturation state
Calcite saturation state
Experiment
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
spellingShingle Acid-base regulation
Animalia
Benthic animals
Benthos
Calcification/Dissolution
Cnidaria
Coast and continental shelf
Laboratory experiment
Montipora capitata
North Pacific
Other studied parameter or process
Porites compressa
Single species
Temperature
Tropical
Event label
Type
Species
Registration number of species
Uniform resource locator/link to reference
Experiment duration
Identification
Site
Temperature, water
Partial pressure of carbon dioxide water at sea surface temperature wet air
Salinity
pH
Alkalinity, total
δ11B
Calcifying fluid, pH
pH change
Boron/Calcium ratio
Calcifying fluid, dissolved inorganic carbon
Ratio
Calcifying fluid, carbonate ion
Calcifying fluid, aragonite saturation state
Calcification rate of calcium carbonate
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Carbon, inorganic, dissolved
Aragonite saturation state
Calcite saturation state
Experiment
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
Schoepf, Verena
Jury, Christopher P
Toonen, Robert J
McCulloch, Malcolm T
Seawater carbonate chemistry and calcifying fluid carbonate chemistry, calcification of coral, supplement to: Schoepf, Verena; Jury, Christopher P; Toonen, Robert J; McCulloch, Malcolm T (2017): Coral calcification mechanisms facilitate adaptive responses to ocean acidification. Proceedings of the Royal Society B-Biological Sciences, 284(1868), 20172117
topic_facet Acid-base regulation
Animalia
Benthic animals
Benthos
Calcification/Dissolution
Cnidaria
Coast and continental shelf
Laboratory experiment
Montipora capitata
North Pacific
Other studied parameter or process
Porites compressa
Single species
Temperature
Tropical
Event label
Type
Species
Registration number of species
Uniform resource locator/link to reference
Experiment duration
Identification
Site
Temperature, water
Partial pressure of carbon dioxide water at sea surface temperature wet air
Salinity
pH
Alkalinity, total
δ11B
Calcifying fluid, pH
pH change
Boron/Calcium ratio
Calcifying fluid, dissolved inorganic carbon
Ratio
Calcifying fluid, carbonate ion
Calcifying fluid, aragonite saturation state
Calcification rate of calcium carbonate
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Carbon, inorganic, dissolved
Aragonite saturation state
Calcite saturation state
Experiment
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
description Ocean acidification (OA) is a pressing threat to reef-building corals, but it remains poorly understood how coral calcification is inhibited by OA and whether corals could acclimatize and/or adapt to OA. Using a novel geochemical approach, we reconstructed the carbonate chemistry of the calcifying fluid in two coral species using both a pH and dissolved inorganic carbon (DIC) proxy (delta 11B and B/Ca, respectively). To address the potential for adaptive responses, both species were collected from two sites spanning a natural gradient in seawater pH and temperature, and then subjected to three pHT levels (8.04, 7.88, 7.71) crossed by two temperatures (control, +1.5°C) for 14 weeks. Corals from the site with naturally lower seawater pH calcified faster and maintained growth better under simulated OA than corals from the higher-pH site. This ability was consistently linked to higher pH yet lower DIC values in the calcifying fluid, suggesting that these differences are the result of long-term acclimatization and/or local adaptation to naturally lower seawater pH. Nevertheless, all corals elevated both pH and DIC significantly over seawater values, even under OA. This implies that high pH upregulation combined with moderate levels of DIC upregulation promote resistance and adaptive responses of coral calcification to OA. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2018-05-23.
format Dataset
author Schoepf, Verena
Jury, Christopher P
Toonen, Robert J
McCulloch, Malcolm T
author_facet Schoepf, Verena
Jury, Christopher P
Toonen, Robert J
McCulloch, Malcolm T
author_sort Schoepf, Verena
title Seawater carbonate chemistry and calcifying fluid carbonate chemistry, calcification of coral, supplement to: Schoepf, Verena; Jury, Christopher P; Toonen, Robert J; McCulloch, Malcolm T (2017): Coral calcification mechanisms facilitate adaptive responses to ocean acidification. Proceedings of the Royal Society B-Biological Sciences, 284(1868), 20172117
title_short Seawater carbonate chemistry and calcifying fluid carbonate chemistry, calcification of coral, supplement to: Schoepf, Verena; Jury, Christopher P; Toonen, Robert J; McCulloch, Malcolm T (2017): Coral calcification mechanisms facilitate adaptive responses to ocean acidification. Proceedings of the Royal Society B-Biological Sciences, 284(1868), 20172117
title_full Seawater carbonate chemistry and calcifying fluid carbonate chemistry, calcification of coral, supplement to: Schoepf, Verena; Jury, Christopher P; Toonen, Robert J; McCulloch, Malcolm T (2017): Coral calcification mechanisms facilitate adaptive responses to ocean acidification. Proceedings of the Royal Society B-Biological Sciences, 284(1868), 20172117
title_fullStr Seawater carbonate chemistry and calcifying fluid carbonate chemistry, calcification of coral, supplement to: Schoepf, Verena; Jury, Christopher P; Toonen, Robert J; McCulloch, Malcolm T (2017): Coral calcification mechanisms facilitate adaptive responses to ocean acidification. Proceedings of the Royal Society B-Biological Sciences, 284(1868), 20172117
title_full_unstemmed Seawater carbonate chemistry and calcifying fluid carbonate chemistry, calcification of coral, supplement to: Schoepf, Verena; Jury, Christopher P; Toonen, Robert J; McCulloch, Malcolm T (2017): Coral calcification mechanisms facilitate adaptive responses to ocean acidification. Proceedings of the Royal Society B-Biological Sciences, 284(1868), 20172117
title_sort seawater carbonate chemistry and calcifying fluid carbonate chemistry, calcification of coral, supplement to: schoepf, verena; jury, christopher p; toonen, robert j; mcculloch, malcolm t (2017): coral calcification mechanisms facilitate adaptive responses to ocean acidification. proceedings of the royal society b-biological sciences, 284(1868), 20172117
publisher PANGAEA - Data Publisher for Earth & Environmental Science
publishDate 2017
url https://dx.doi.org/10.1594/pangaea.891559
https://doi.pangaea.de/10.1594/PANGAEA.891559
geographic Pacific
geographic_facet Pacific
genre Ocean acidification
genre_facet Ocean acidification
op_relation https://cran.r-project.org/package=seacarb
https://dx.doi.org/10.1098/rspb.2017.2117
https://cran.r-project.org/package=seacarb
op_rights Creative Commons Attribution 3.0 Unported
https://creativecommons.org/licenses/by/3.0/legalcode
cc-by-3.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.1594/pangaea.891559
https://doi.org/10.1098/rspb.2017.2117
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