Seawater carbonate chemistry and primary productivity, bacterial productivity, and the accumulation of chlorophyll a (Chl a) and particulate organic matter (POM) of coastal marine microbial community in Prydz Bay

In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addi...

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Main Authors: Deppeler, Stacy, Petrou, Katherina, Schulz, Kai Georg, Westwood, Karen, Pearce, Imojen, McKinlay, John, Davidson, Andrew T
Format: Dataset
Language:English
Published: PANGAEA - Data Publisher for Earth & Environmental Science 2018
Subjects:
Antarctic
Biomass/Abundance/Elemental composition
Coast and continental shelf
Containers and aquaria 20-1000 L or < 1 m**2
Entire community
Laboratory experiment
Other metabolic rates
Pelagos
Polar
Primary production/Photosynthesis
Type
Day of experiment
Fugacity of carbon dioxide water at sea surface temperature wet air
Replicate
Irradiance
Effective quantum yield
Non photochemical quenching
Electron transport rate, relative
Maximum photochemical quantum yield of photosystem II
Cell size
Treatment
Net photosynthesis rate, oxygen
Respiration rate, oxygen
Identification
Nitrogen, organic, particulate
Carbon, organic, particulate
Carbon/Nitrogen ratio
Chlorophyll a
Date
Bacteria, abundance
Maximum light utilization coefficient in carbon normalized to chlorophyll a
Photoinhibition in carbon normalized to chlorophyll a
Maximum photosynthetic efficiency normalized to chlorophyll a biomass
Light saturation
Specific primary production of carbon per Chlorophyll a
Primary production of carbon
Bacterial carbon production
Bacteria, production as carbon
Bacterial production, standard error
Bacterial carbon production per cell
Carbon, inorganic, dissolved
pH
Salinity
Temperature, water
Alkalinity, total
Aragonite saturation state
Calcite saturation state
Nitrate and Nitrite
Phosphorus, reactive soluble
Silicate, reactive
Carbonate system computation flag
Carbon dioxide
Partial pressure of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Experiment
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
Prydz Bay
Antarc*
Ocean acidification
Online Access:https://dx.doi.org/10.1594/pangaea.890816
https://doi.pangaea.de/10.1594/PANGAEA.890816
id ftdatacite:10.1594/pangaea.890816
record_format openpolar
spelling ftdatacite:10.1594/pangaea.890816 2023-05-15T13:40:08+02:00 Seawater carbonate chemistry and primary productivity, bacterial productivity, and the accumulation of chlorophyll a (Chl a) and particulate organic matter (POM) of coastal marine microbial community in Prydz Bay Deppeler, Stacy Petrou, Katherina Schulz, Kai Georg Westwood, Karen Pearce, Imojen McKinlay, John Davidson, Andrew T 2018 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.890816 https://doi.pangaea.de/10.1594/PANGAEA.890816 en eng PANGAEA - Data Publisher for Earth & Environmental Science https://cran.r-project.org/package=seacarb https://dx.doi.org/10.5194/bg-15-209-2018 https://dx.doi.org/10.4225/15/599a7dfe9470a https://dx.doi.org/10.4225/15/599a7cc747c61 https://cran.r-project.org/package=seacarb Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 CC-BY Antarctic Biomass/Abundance/Elemental composition Coast and continental shelf Containers and aquaria 20-1000 L or < 1 m**2 Entire community Laboratory experiment Other metabolic rates Pelagos Polar Primary production/Photosynthesis Type Day of experiment Fugacity of carbon dioxide water at sea surface temperature wet air Replicate Irradiance Effective quantum yield Non photochemical quenching Electron transport rate, relative Maximum photochemical quantum yield of photosystem II Cell size Treatment Net photosynthesis rate, oxygen Respiration rate, oxygen Identification Nitrogen, organic, particulate Carbon, organic, particulate Carbon/Nitrogen ratio Chlorophyll a Date Bacteria, abundance Maximum light utilization coefficient in carbon normalized to chlorophyll a Photoinhibition in carbon normalized to chlorophyll a Maximum photosynthetic efficiency normalized to chlorophyll a biomass Light saturation Specific primary production of carbon per Chlorophyll a Primary production of carbon Bacterial carbon production Bacteria, production as carbon Bacterial production, standard error Bacterial carbon production per cell Carbon, inorganic, dissolved pH Salinity Temperature, water Alkalinity, total Aragonite saturation state Calcite saturation state Nitrate and Nitrite Phosphorus, reactive soluble Silicate, reactive Carbonate system computation flag Carbon dioxide Partial pressure of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbonate ion Experiment Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC dataset Dataset 2018 ftdatacite https://doi.org/10.1594/pangaea.890816 https://doi.org/10.5194/bg-15-209-2018 https://doi.org/10.4225/15/599a7dfe9470a https://doi.org/10.4225/15/599a7cc747c61 2021-11-05T12:55:41Z In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2018-05-23. Dataset Antarc* Antarctic Ocean acidification Prydz Bay DataCite Metadata Store (German National Library of Science and Technology) Antarctic Prydz Bay
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Antarctic
Biomass/Abundance/Elemental composition
Coast and continental shelf
Containers and aquaria 20-1000 L or < 1 m**2
Entire community
Laboratory experiment
Other metabolic rates
Pelagos
Polar
Primary production/Photosynthesis
Type
Day of experiment
Fugacity of carbon dioxide water at sea surface temperature wet air
Replicate
Irradiance
Effective quantum yield
Non photochemical quenching
Electron transport rate, relative
Maximum photochemical quantum yield of photosystem II
Cell size
Treatment
Net photosynthesis rate, oxygen
Respiration rate, oxygen
Identification
Nitrogen, organic, particulate
Carbon, organic, particulate
Carbon/Nitrogen ratio
Chlorophyll a
Date
Bacteria, abundance
Maximum light utilization coefficient in carbon normalized to chlorophyll a
Photoinhibition in carbon normalized to chlorophyll a
Maximum photosynthetic efficiency normalized to chlorophyll a biomass
Light saturation
Specific primary production of carbon per Chlorophyll a
Primary production of carbon
Bacterial carbon production
Bacteria, production as carbon
Bacterial production, standard error
Bacterial carbon production per cell
Carbon, inorganic, dissolved
pH
Salinity
Temperature, water
Alkalinity, total
Aragonite saturation state
Calcite saturation state
Nitrate and Nitrite
Phosphorus, reactive soluble
Silicate, reactive
Carbonate system computation flag
Carbon dioxide
Partial pressure of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Experiment
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
spellingShingle Antarctic
Biomass/Abundance/Elemental composition
Coast and continental shelf
Containers and aquaria 20-1000 L or < 1 m**2
Entire community
Laboratory experiment
Other metabolic rates
Pelagos
Polar
Primary production/Photosynthesis
Type
Day of experiment
Fugacity of carbon dioxide water at sea surface temperature wet air
Replicate
Irradiance
Effective quantum yield
Non photochemical quenching
Electron transport rate, relative
Maximum photochemical quantum yield of photosystem II
Cell size
Treatment
Net photosynthesis rate, oxygen
Respiration rate, oxygen
Identification
Nitrogen, organic, particulate
Carbon, organic, particulate
Carbon/Nitrogen ratio
Chlorophyll a
Date
Bacteria, abundance
Maximum light utilization coefficient in carbon normalized to chlorophyll a
Photoinhibition in carbon normalized to chlorophyll a
Maximum photosynthetic efficiency normalized to chlorophyll a biomass
Light saturation
Specific primary production of carbon per Chlorophyll a
Primary production of carbon
Bacterial carbon production
Bacteria, production as carbon
Bacterial production, standard error
Bacterial carbon production per cell
Carbon, inorganic, dissolved
pH
Salinity
Temperature, water
Alkalinity, total
Aragonite saturation state
Calcite saturation state
Nitrate and Nitrite
Phosphorus, reactive soluble
Silicate, reactive
Carbonate system computation flag
Carbon dioxide
Partial pressure of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Experiment
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
Deppeler, Stacy
Petrou, Katherina
Schulz, Kai Georg
Westwood, Karen
Pearce, Imojen
McKinlay, John
Davidson, Andrew T
Seawater carbonate chemistry and primary productivity, bacterial productivity, and the accumulation of chlorophyll a (Chl a) and particulate organic matter (POM) of coastal marine microbial community in Prydz Bay
topic_facet Antarctic
Biomass/Abundance/Elemental composition
Coast and continental shelf
Containers and aquaria 20-1000 L or < 1 m**2
Entire community
Laboratory experiment
Other metabolic rates
Pelagos
Polar
Primary production/Photosynthesis
Type
Day of experiment
Fugacity of carbon dioxide water at sea surface temperature wet air
Replicate
Irradiance
Effective quantum yield
Non photochemical quenching
Electron transport rate, relative
Maximum photochemical quantum yield of photosystem II
Cell size
Treatment
Net photosynthesis rate, oxygen
Respiration rate, oxygen
Identification
Nitrogen, organic, particulate
Carbon, organic, particulate
Carbon/Nitrogen ratio
Chlorophyll a
Date
Bacteria, abundance
Maximum light utilization coefficient in carbon normalized to chlorophyll a
Photoinhibition in carbon normalized to chlorophyll a
Maximum photosynthetic efficiency normalized to chlorophyll a biomass
Light saturation
Specific primary production of carbon per Chlorophyll a
Primary production of carbon
Bacterial carbon production
Bacteria, production as carbon
Bacterial production, standard error
Bacterial carbon production per cell
Carbon, inorganic, dissolved
pH
Salinity
Temperature, water
Alkalinity, total
Aragonite saturation state
Calcite saturation state
Nitrate and Nitrite
Phosphorus, reactive soluble
Silicate, reactive
Carbonate system computation flag
Carbon dioxide
Partial pressure of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Experiment
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
description In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2018-05-23.
format Dataset
author Deppeler, Stacy
Petrou, Katherina
Schulz, Kai Georg
Westwood, Karen
Pearce, Imojen
McKinlay, John
Davidson, Andrew T
author_facet Deppeler, Stacy
Petrou, Katherina
Schulz, Kai Georg
Westwood, Karen
Pearce, Imojen
McKinlay, John
Davidson, Andrew T
author_sort Deppeler, Stacy
title Seawater carbonate chemistry and primary productivity, bacterial productivity, and the accumulation of chlorophyll a (Chl a) and particulate organic matter (POM) of coastal marine microbial community in Prydz Bay
title_short Seawater carbonate chemistry and primary productivity, bacterial productivity, and the accumulation of chlorophyll a (Chl a) and particulate organic matter (POM) of coastal marine microbial community in Prydz Bay
title_full Seawater carbonate chemistry and primary productivity, bacterial productivity, and the accumulation of chlorophyll a (Chl a) and particulate organic matter (POM) of coastal marine microbial community in Prydz Bay
title_fullStr Seawater carbonate chemistry and primary productivity, bacterial productivity, and the accumulation of chlorophyll a (Chl a) and particulate organic matter (POM) of coastal marine microbial community in Prydz Bay
title_full_unstemmed Seawater carbonate chemistry and primary productivity, bacterial productivity, and the accumulation of chlorophyll a (Chl a) and particulate organic matter (POM) of coastal marine microbial community in Prydz Bay
title_sort seawater carbonate chemistry and primary productivity, bacterial productivity, and the accumulation of chlorophyll a (chl a) and particulate organic matter (pom) of coastal marine microbial community in prydz bay
publisher PANGAEA - Data Publisher for Earth & Environmental Science
publishDate 2018
url https://dx.doi.org/10.1594/pangaea.890816
https://doi.pangaea.de/10.1594/PANGAEA.890816
geographic Antarctic
Prydz Bay
geographic_facet Antarctic
Prydz Bay
genre Antarc*
Antarctic
Ocean acidification
Prydz Bay
genre_facet Antarc*
Antarctic
Ocean acidification
Prydz Bay
op_relation https://cran.r-project.org/package=seacarb
https://dx.doi.org/10.5194/bg-15-209-2018
https://dx.doi.org/10.4225/15/599a7dfe9470a
https://dx.doi.org/10.4225/15/599a7cc747c61
https://cran.r-project.org/package=seacarb
op_rights Creative Commons Attribution 3.0 Unported
https://creativecommons.org/licenses/by/3.0/legalcode
cc-by-3.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.1594/pangaea.890816
https://doi.org/10.5194/bg-15-209-2018
https://doi.org/10.4225/15/599a7dfe9470a
https://doi.org/10.4225/15/599a7cc747c61
_version_ 1766128593324212224

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