Seawater carbonate chemistry and elemental composition of the particulate and dissolved organic matter of marine diatoms, supplement to: Sugie, Koji; Yoshimura, T; Wakita, M (2018): Impact of CO2 on the elemental composition of the particulate and dissolved organic matter of marine diatoms emerged after nitrate depletion. Limnology and Oceanography

Although the dissolved inorganic carbon concentration, pH, and nutrient regimes of seawater dramatically change in coastal regions, the synergistic effects of changes in the CO2 and nutrient levels on the elemental dynamics of the particulate and dissolved organic matters (DOMs) produced by diatoms...

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Main Authors: Sugie, Koji, Takeshi, Yoshimura, Masahide, Wakita
Format: Dataset
Language:English
Published: PANGAEA - Data Publisher for Earth & Environmental Science 2018
Subjects:
pH
Online Access:https://dx.doi.org/10.1594/pangaea.887739
https://doi.pangaea.de/10.1594/PANGAEA.887739
id ftdatacite:10.1594/pangaea.887739
record_format openpolar
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria <20 L
Chromista
Coast and continental shelf
Growth/Morphology
Laboratory experiment
Macro-nutrients
North Pacific
Ochrophyta
Pelagos
Phytoplankton
Single species
Temperate
Type
Species
Registration number of species
Uniform resource locator/link to reference
Experiment duration
Time in days
Partial pressure of carbon dioxide water at sea surface temperature wet air
Identification
Temperature, water
Salinity
Alkalinity, total
Carbon, inorganic, dissolved
Growth rate
Chlorophyll a
Cell density
Phytoplankton, biovolume
Carbon, organic, particulate
Nitrogen, particulate
Phosphorus, particulate
Biogenic silica
Carbon, organic, dissolved
Nitrogen, organic, dissolved
Phosphorus, organic, dissolved
Transparent exopolymer particles as Gum Xanthan equivalents per volume
Bacteria
Carbonate system computation flag
pH
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Aragonite saturation state
Calcite saturation state
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
spellingShingle Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria <20 L
Chromista
Coast and continental shelf
Growth/Morphology
Laboratory experiment
Macro-nutrients
North Pacific
Ochrophyta
Pelagos
Phytoplankton
Single species
Temperate
Type
Species
Registration number of species
Uniform resource locator/link to reference
Experiment duration
Time in days
Partial pressure of carbon dioxide water at sea surface temperature wet air
Identification
Temperature, water
Salinity
Alkalinity, total
Carbon, inorganic, dissolved
Growth rate
Chlorophyll a
Cell density
Phytoplankton, biovolume
Carbon, organic, particulate
Nitrogen, particulate
Phosphorus, particulate
Biogenic silica
Carbon, organic, dissolved
Nitrogen, organic, dissolved
Phosphorus, organic, dissolved
Transparent exopolymer particles as Gum Xanthan equivalents per volume
Bacteria
Carbonate system computation flag
pH
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Aragonite saturation state
Calcite saturation state
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
Sugie, Koji
Takeshi, Yoshimura
Masahide, Wakita
Seawater carbonate chemistry and elemental composition of the particulate and dissolved organic matter of marine diatoms, supplement to: Sugie, Koji; Yoshimura, T; Wakita, M (2018): Impact of CO2 on the elemental composition of the particulate and dissolved organic matter of marine diatoms emerged after nitrate depletion. Limnology and Oceanography
topic_facet Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria <20 L
Chromista
Coast and continental shelf
Growth/Morphology
Laboratory experiment
Macro-nutrients
North Pacific
Ochrophyta
Pelagos
Phytoplankton
Single species
Temperate
Type
Species
Registration number of species
Uniform resource locator/link to reference
Experiment duration
Time in days
Partial pressure of carbon dioxide water at sea surface temperature wet air
Identification
Temperature, water
Salinity
Alkalinity, total
Carbon, inorganic, dissolved
Growth rate
Chlorophyll a
Cell density
Phytoplankton, biovolume
Carbon, organic, particulate
Nitrogen, particulate
Phosphorus, particulate
Biogenic silica
Carbon, organic, dissolved
Nitrogen, organic, dissolved
Phosphorus, organic, dissolved
Transparent exopolymer particles as Gum Xanthan equivalents per volume
Bacteria
Carbonate system computation flag
pH
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Aragonite saturation state
Calcite saturation state
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
description Although the dissolved inorganic carbon concentration, pH, and nutrient regimes of seawater dramatically change in coastal regions, the synergistic effects of changes in the CO2 and nutrient levels on the elemental dynamics of the particulate and dissolved organic matters (DOMs) produced by diatoms are rarely investigated. Here, we investigated the impacts of four different CO2 levels (180, 380, 600, and 1000 μatm partial pressure of CO2 : pCO2) on the allocation of carbon, nitrogen, phosphorus, and silicon between the particulate matter (PM) and DOM in two cosmopolitan coastal diatoms, Chaetoceros affinis and Ditylum brightwellii, under nutrient‐replete and nitrate‐depleted conditions. Under nutrient‐replete conditions, the specific growth rates of both species were positively correlated with pCO2 levels. The elemental compositions of the exponentially growing diatoms were stable under the different pCO2 conditions. After nitrate depletion, the particulate organic carbon to particulate nitrogen ratio and biogenic silica content per unit biomass in both species were positively correlated with the pCO2 value. Factors affecting the pCO2 dependent change in elemental composition were the variations in the partitioning of organic carbon between PM and DOM in C. affinis, and the physiological uncoupling of intracellular carbon and nitrogen and the intracellular silicon and nitrogen, as well as resting spore formation in D. brightwellii. Under high‐CO2 conditions, the faster growth rates of both diatom species could lead to their dominance in a phytoplankton community; their blooms could modify the first‐order processes in the biogeochemical cycling of bioelements after nitrate depletion. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2018-03-28.
format Dataset
author Sugie, Koji
Takeshi, Yoshimura
Masahide, Wakita
author_facet Sugie, Koji
Takeshi, Yoshimura
Masahide, Wakita
author_sort Sugie, Koji
title Seawater carbonate chemistry and elemental composition of the particulate and dissolved organic matter of marine diatoms, supplement to: Sugie, Koji; Yoshimura, T; Wakita, M (2018): Impact of CO2 on the elemental composition of the particulate and dissolved organic matter of marine diatoms emerged after nitrate depletion. Limnology and Oceanography
title_short Seawater carbonate chemistry and elemental composition of the particulate and dissolved organic matter of marine diatoms, supplement to: Sugie, Koji; Yoshimura, T; Wakita, M (2018): Impact of CO2 on the elemental composition of the particulate and dissolved organic matter of marine diatoms emerged after nitrate depletion. Limnology and Oceanography
title_full Seawater carbonate chemistry and elemental composition of the particulate and dissolved organic matter of marine diatoms, supplement to: Sugie, Koji; Yoshimura, T; Wakita, M (2018): Impact of CO2 on the elemental composition of the particulate and dissolved organic matter of marine diatoms emerged after nitrate depletion. Limnology and Oceanography
title_fullStr Seawater carbonate chemistry and elemental composition of the particulate and dissolved organic matter of marine diatoms, supplement to: Sugie, Koji; Yoshimura, T; Wakita, M (2018): Impact of CO2 on the elemental composition of the particulate and dissolved organic matter of marine diatoms emerged after nitrate depletion. Limnology and Oceanography
title_full_unstemmed Seawater carbonate chemistry and elemental composition of the particulate and dissolved organic matter of marine diatoms, supplement to: Sugie, Koji; Yoshimura, T; Wakita, M (2018): Impact of CO2 on the elemental composition of the particulate and dissolved organic matter of marine diatoms emerged after nitrate depletion. Limnology and Oceanography
title_sort seawater carbonate chemistry and elemental composition of the particulate and dissolved organic matter of marine diatoms, supplement to: sugie, koji; yoshimura, t; wakita, m (2018): impact of co2 on the elemental composition of the particulate and dissolved organic matter of marine diatoms emerged after nitrate depletion. limnology and oceanography
publisher PANGAEA - Data Publisher for Earth & Environmental Science
publishDate 2018
url https://dx.doi.org/10.1594/pangaea.887739
https://doi.pangaea.de/10.1594/PANGAEA.887739
geographic Pacific
geographic_facet Pacific
genre Ocean acidification
genre_facet Ocean acidification
op_relation https://cran.r-project.org/package=seacarb
https://dx.doi.org/10.1002/lno.10816
https://cran.r-project.org/package=seacarb
op_rights Creative Commons Attribution 3.0 Unported
https://creativecommons.org/licenses/by/3.0/legalcode
cc-by-3.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.1594/pangaea.887739
https://doi.org/10.1002/lno.10816
_version_ 1766158725545984000
spelling ftdatacite:10.1594/pangaea.887739 2023-05-15T17:51:32+02:00 Seawater carbonate chemistry and elemental composition of the particulate and dissolved organic matter of marine diatoms, supplement to: Sugie, Koji; Yoshimura, T; Wakita, M (2018): Impact of CO2 on the elemental composition of the particulate and dissolved organic matter of marine diatoms emerged after nitrate depletion. Limnology and Oceanography Sugie, Koji Takeshi, Yoshimura Masahide, Wakita 2018 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.887739 https://doi.pangaea.de/10.1594/PANGAEA.887739 en eng PANGAEA - Data Publisher for Earth & Environmental Science https://cran.r-project.org/package=seacarb https://dx.doi.org/10.1002/lno.10816 https://cran.r-project.org/package=seacarb Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 CC-BY Biomass/Abundance/Elemental composition Bottles or small containers/Aquaria <20 L Chromista Coast and continental shelf Growth/Morphology Laboratory experiment Macro-nutrients North Pacific Ochrophyta Pelagos Phytoplankton Single species Temperate Type Species Registration number of species Uniform resource locator/link to reference Experiment duration Time in days Partial pressure of carbon dioxide water at sea surface temperature wet air Identification Temperature, water Salinity Alkalinity, total Carbon, inorganic, dissolved Growth rate Chlorophyll a Cell density Phytoplankton, biovolume Carbon, organic, particulate Nitrogen, particulate Phosphorus, particulate Biogenic silica Carbon, organic, dissolved Nitrogen, organic, dissolved Phosphorus, organic, dissolved Transparent exopolymer particles as Gum Xanthan equivalents per volume Bacteria Carbonate system computation flag pH Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbonate ion Aragonite saturation state Calcite saturation state Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC Supplementary Dataset dataset Dataset 2018 ftdatacite https://doi.org/10.1594/pangaea.887739 https://doi.org/10.1002/lno.10816 2022-02-08T16:27:35Z Although the dissolved inorganic carbon concentration, pH, and nutrient regimes of seawater dramatically change in coastal regions, the synergistic effects of changes in the CO2 and nutrient levels on the elemental dynamics of the particulate and dissolved organic matters (DOMs) produced by diatoms are rarely investigated. Here, we investigated the impacts of four different CO2 levels (180, 380, 600, and 1000 μatm partial pressure of CO2 : pCO2) on the allocation of carbon, nitrogen, phosphorus, and silicon between the particulate matter (PM) and DOM in two cosmopolitan coastal diatoms, Chaetoceros affinis and Ditylum brightwellii, under nutrient‐replete and nitrate‐depleted conditions. Under nutrient‐replete conditions, the specific growth rates of both species were positively correlated with pCO2 levels. The elemental compositions of the exponentially growing diatoms were stable under the different pCO2 conditions. After nitrate depletion, the particulate organic carbon to particulate nitrogen ratio and biogenic silica content per unit biomass in both species were positively correlated with the pCO2 value. Factors affecting the pCO2 dependent change in elemental composition were the variations in the partitioning of organic carbon between PM and DOM in C. affinis, and the physiological uncoupling of intracellular carbon and nitrogen and the intracellular silicon and nitrogen, as well as resting spore formation in D. brightwellii. Under high‐CO2 conditions, the faster growth rates of both diatom species could lead to their dominance in a phytoplankton community; their blooms could modify the first‐order processes in the biogeochemical cycling of bioelements after nitrate depletion. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2018-03-28. Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology) Pacific