Seawater carbon chemistry and calcification,carbonic anhydrase activity of cold-water coral Lophelia pertusa, supplement to: Kurman, Melissa; Gómez, C E; Georgian, Samuel E; Lunden, Jay J; Cordes, Erik E (2017): Intra-Specific Variation Reveals Potential for Adaptation to Ocean Acidification in a Cold-Water Coral from the Gulf of Mexico. Frontiers in Marine Science, 4

Ocean acidification, the decrease in seawater pH due to the absorption of atmospheric CO2, profoundly threatens the survival of a large number of marine species. Cold-water corals are considered to be among the most vulnerable organisms to ocean acidification because they are already exposed to rela...

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Main Authors: Kurman, Melissa, Gómez, C E, Georgian, Samuel E, Lunden, Jay J, Cordes, Erik E
Format: Dataset
Language:English
Published: PANGAEA - Data Publisher for Earth & Environmental Science 2017
Subjects:
pH
Online Access:https://dx.doi.org/10.1594/pangaea.877984
https://doi.pangaea.de/10.1594/PANGAEA.877984
id ftdatacite:10.1594/pangaea.877984
record_format openpolar
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Animalia
Benthic animals
Benthos
Calcification/Dissolution
Cnidaria
Containers and aquaria 20-1000 L or < 1 m**2
Deep-sea
Laboratory experiment
Lophelia pertusa
North Atlantic
Single species
Temperate
Type
Species
Registration number of species
Uniform resource locator/link to reference
Experiment duration
Incubation duration
Experiment
Treatment
Replicate
Site
Genotype
LATITUDE
LONGITUDE
DEPTH, water
Identification
DATE/TIME
Time, incubation
Buoyant weight
Density
Dry mass
Mass change
Calcification rate
Time point, descriptive
Carbonic anhydrase activity, per tissue weight
Temperature, water
Temperature, water, standard deviation
pH
pH, standard deviation
Salinity
Salinity, standard deviation
Alkalinity, total
Alkalinity, total, standard deviation
Partial pressure of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide, standard deviation
Bicarbonate ion
Bicarbonate ion, standard deviation
Carbon dioxide
Carbon dioxide, standard deviation
Carbonate ion
Carbonate ion, standard deviation
Aragonite saturation state
Aragonite saturation state, standard deviation
Carbonate system computation flag
Fugacity of carbon dioxide water at sea surface temperature wet air
Carbon, inorganic, dissolved
Calcite saturation state
Potentiometric
Potentiometric titration
Calculated using CO2calc
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
spellingShingle Animalia
Benthic animals
Benthos
Calcification/Dissolution
Cnidaria
Containers and aquaria 20-1000 L or < 1 m**2
Deep-sea
Laboratory experiment
Lophelia pertusa
North Atlantic
Single species
Temperate
Type
Species
Registration number of species
Uniform resource locator/link to reference
Experiment duration
Incubation duration
Experiment
Treatment
Replicate
Site
Genotype
LATITUDE
LONGITUDE
DEPTH, water
Identification
DATE/TIME
Time, incubation
Buoyant weight
Density
Dry mass
Mass change
Calcification rate
Time point, descriptive
Carbonic anhydrase activity, per tissue weight
Temperature, water
Temperature, water, standard deviation
pH
pH, standard deviation
Salinity
Salinity, standard deviation
Alkalinity, total
Alkalinity, total, standard deviation
Partial pressure of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide, standard deviation
Bicarbonate ion
Bicarbonate ion, standard deviation
Carbon dioxide
Carbon dioxide, standard deviation
Carbonate ion
Carbonate ion, standard deviation
Aragonite saturation state
Aragonite saturation state, standard deviation
Carbonate system computation flag
Fugacity of carbon dioxide water at sea surface temperature wet air
Carbon, inorganic, dissolved
Calcite saturation state
Potentiometric
Potentiometric titration
Calculated using CO2calc
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
Kurman, Melissa
Gómez, C E
Georgian, Samuel E
Lunden, Jay J
Cordes, Erik E
Seawater carbon chemistry and calcification,carbonic anhydrase activity of cold-water coral Lophelia pertusa, supplement to: Kurman, Melissa; Gómez, C E; Georgian, Samuel E; Lunden, Jay J; Cordes, Erik E (2017): Intra-Specific Variation Reveals Potential for Adaptation to Ocean Acidification in a Cold-Water Coral from the Gulf of Mexico. Frontiers in Marine Science, 4
topic_facet Animalia
Benthic animals
Benthos
Calcification/Dissolution
Cnidaria
Containers and aquaria 20-1000 L or < 1 m**2
Deep-sea
Laboratory experiment
Lophelia pertusa
North Atlantic
Single species
Temperate
Type
Species
Registration number of species
Uniform resource locator/link to reference
Experiment duration
Incubation duration
Experiment
Treatment
Replicate
Site
Genotype
LATITUDE
LONGITUDE
DEPTH, water
Identification
DATE/TIME
Time, incubation
Buoyant weight
Density
Dry mass
Mass change
Calcification rate
Time point, descriptive
Carbonic anhydrase activity, per tissue weight
Temperature, water
Temperature, water, standard deviation
pH
pH, standard deviation
Salinity
Salinity, standard deviation
Alkalinity, total
Alkalinity, total, standard deviation
Partial pressure of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide, standard deviation
Bicarbonate ion
Bicarbonate ion, standard deviation
Carbon dioxide
Carbon dioxide, standard deviation
Carbonate ion
Carbonate ion, standard deviation
Aragonite saturation state
Aragonite saturation state, standard deviation
Carbonate system computation flag
Fugacity of carbon dioxide water at sea surface temperature wet air
Carbon, inorganic, dissolved
Calcite saturation state
Potentiometric
Potentiometric titration
Calculated using CO2calc
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
description Ocean acidification, the decrease in seawater pH due to the absorption of atmospheric CO2, profoundly threatens the survival of a large number of marine species. Cold-water corals are considered to be among the most vulnerable organisms to ocean acidification because they are already exposed to relatively low pH and corresponding low calcium carbonate saturation states (Omega). Lophelia pertusa is a globally distributed cold-water scleractinian coral that provides critical three-dimensional habitat for many ecologically and economically significant species. In this study, four different genotypes of L. pertusa were exposed to three pH treatments (pH=7.60, 7.75, and 7.90) over a short (two-week) experimental period, and six genotypes were exposed to two pH treatments (pH=7.60, and 7.90) over a long (six-month) experimental period. Their physiological response was measured as net calcification rate and the activity of carbonic anhydrase, a key enzyme in the calcification pathway. In the short-term experiment, net calcification rates did not significantly change with pH, although they were highly variable in the low pH treatment, including some genotypes that maintained positive net calcification in undersaturated conditions. In the six-month experiment, average net calcification was significantly reduced at low pH, with corals exhibiting net dissolution of skeleton. However, one of the same genotypes that maintained positive net calcification (+0.04% day-1) under the low pH treatment in the short-term experiment also maintained positive net calcification longer than the other genotypes in the long-term experiment, although none of the corals maintained positive calcification for the entire 6 months. Average carbonic anhydrase activity was not affected by pH, although some genotypes exhibited small, insignificant, increases in activity after the sixth month. Our results suggest that while net calcification in L. pertusa is adversely affected by ocean acidification in the long term, it is possible that some genotypes may prove to be more resilient than others, particularly to short perturbations of the carbonate system. These results provide evidence that populations of L. pertusa in the Gulf of Mexico may contain the genetic variability necessary to support an adaptive response to future ocean acidification. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2017-07-19.
format Dataset
author Kurman, Melissa
Gómez, C E
Georgian, Samuel E
Lunden, Jay J
Cordes, Erik E
author_facet Kurman, Melissa
Gómez, C E
Georgian, Samuel E
Lunden, Jay J
Cordes, Erik E
author_sort Kurman, Melissa
title Seawater carbon chemistry and calcification,carbonic anhydrase activity of cold-water coral Lophelia pertusa, supplement to: Kurman, Melissa; Gómez, C E; Georgian, Samuel E; Lunden, Jay J; Cordes, Erik E (2017): Intra-Specific Variation Reveals Potential for Adaptation to Ocean Acidification in a Cold-Water Coral from the Gulf of Mexico. Frontiers in Marine Science, 4
title_short Seawater carbon chemistry and calcification,carbonic anhydrase activity of cold-water coral Lophelia pertusa, supplement to: Kurman, Melissa; Gómez, C E; Georgian, Samuel E; Lunden, Jay J; Cordes, Erik E (2017): Intra-Specific Variation Reveals Potential for Adaptation to Ocean Acidification in a Cold-Water Coral from the Gulf of Mexico. Frontiers in Marine Science, 4
title_full Seawater carbon chemistry and calcification,carbonic anhydrase activity of cold-water coral Lophelia pertusa, supplement to: Kurman, Melissa; Gómez, C E; Georgian, Samuel E; Lunden, Jay J; Cordes, Erik E (2017): Intra-Specific Variation Reveals Potential for Adaptation to Ocean Acidification in a Cold-Water Coral from the Gulf of Mexico. Frontiers in Marine Science, 4
title_fullStr Seawater carbon chemistry and calcification,carbonic anhydrase activity of cold-water coral Lophelia pertusa, supplement to: Kurman, Melissa; Gómez, C E; Georgian, Samuel E; Lunden, Jay J; Cordes, Erik E (2017): Intra-Specific Variation Reveals Potential for Adaptation to Ocean Acidification in a Cold-Water Coral from the Gulf of Mexico. Frontiers in Marine Science, 4
title_full_unstemmed Seawater carbon chemistry and calcification,carbonic anhydrase activity of cold-water coral Lophelia pertusa, supplement to: Kurman, Melissa; Gómez, C E; Georgian, Samuel E; Lunden, Jay J; Cordes, Erik E (2017): Intra-Specific Variation Reveals Potential for Adaptation to Ocean Acidification in a Cold-Water Coral from the Gulf of Mexico. Frontiers in Marine Science, 4
title_sort seawater carbon chemistry and calcification,carbonic anhydrase activity of cold-water coral lophelia pertusa, supplement to: kurman, melissa; gómez, c e; georgian, samuel e; lunden, jay j; cordes, erik e (2017): intra-specific variation reveals potential for adaptation to ocean acidification in a cold-water coral from the gulf of mexico. frontiers in marine science, 4
publisher PANGAEA - Data Publisher for Earth & Environmental Science
publishDate 2017
url https://dx.doi.org/10.1594/pangaea.877984
https://doi.pangaea.de/10.1594/PANGAEA.877984
long_lat ENVELOPE(6.468,6.468,62.598,62.598)
geographic Lunden
geographic_facet Lunden
genre Lophelia pertusa
North Atlantic
Ocean acidification
genre_facet Lophelia pertusa
North Atlantic
Ocean acidification
op_relation https://cran.r-project.org/package=seacarb
https://dx.doi.org/10.3389/fmars.2017.00111
https://cran.r-project.org/package=seacarb
op_rights Creative Commons Attribution 3.0 Unported
https://creativecommons.org/licenses/by/3.0/legalcode
cc-by-3.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.1594/pangaea.877984
https://doi.org/10.3389/fmars.2017.00111
_version_ 1766064538740850688
spelling ftdatacite:10.1594/pangaea.877984 2023-05-15T17:08:42+02:00 Seawater carbon chemistry and calcification,carbonic anhydrase activity of cold-water coral Lophelia pertusa, supplement to: Kurman, Melissa; Gómez, C E; Georgian, Samuel E; Lunden, Jay J; Cordes, Erik E (2017): Intra-Specific Variation Reveals Potential for Adaptation to Ocean Acidification in a Cold-Water Coral from the Gulf of Mexico. Frontiers in Marine Science, 4 Kurman, Melissa Gómez, C E Georgian, Samuel E Lunden, Jay J Cordes, Erik E 2017 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.877984 https://doi.pangaea.de/10.1594/PANGAEA.877984 en eng PANGAEA - Data Publisher for Earth & Environmental Science https://cran.r-project.org/package=seacarb https://dx.doi.org/10.3389/fmars.2017.00111 https://cran.r-project.org/package=seacarb Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 CC-BY Animalia Benthic animals Benthos Calcification/Dissolution Cnidaria Containers and aquaria 20-1000 L or < 1 m**2 Deep-sea Laboratory experiment Lophelia pertusa North Atlantic Single species Temperate Type Species Registration number of species Uniform resource locator/link to reference Experiment duration Incubation duration Experiment Treatment Replicate Site Genotype LATITUDE LONGITUDE DEPTH, water Identification DATE/TIME Time, incubation Buoyant weight Density Dry mass Mass change Calcification rate Time point, descriptive Carbonic anhydrase activity, per tissue weight Temperature, water Temperature, water, standard deviation pH pH, standard deviation Salinity Salinity, standard deviation Alkalinity, total Alkalinity, total, standard deviation Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide, standard deviation Bicarbonate ion Bicarbonate ion, standard deviation Carbon dioxide Carbon dioxide, standard deviation Carbonate ion Carbonate ion, standard deviation Aragonite saturation state Aragonite saturation state, standard deviation Carbonate system computation flag Fugacity of carbon dioxide water at sea surface temperature wet air Carbon, inorganic, dissolved Calcite saturation state Potentiometric Potentiometric titration Calculated using CO2calc Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC Supplementary Dataset dataset Dataset 2017 ftdatacite https://doi.org/10.1594/pangaea.877984 https://doi.org/10.3389/fmars.2017.00111 2021-11-05T12:55:41Z Ocean acidification, the decrease in seawater pH due to the absorption of atmospheric CO2, profoundly threatens the survival of a large number of marine species. Cold-water corals are considered to be among the most vulnerable organisms to ocean acidification because they are already exposed to relatively low pH and corresponding low calcium carbonate saturation states (Omega). Lophelia pertusa is a globally distributed cold-water scleractinian coral that provides critical three-dimensional habitat for many ecologically and economically significant species. In this study, four different genotypes of L. pertusa were exposed to three pH treatments (pH=7.60, 7.75, and 7.90) over a short (two-week) experimental period, and six genotypes were exposed to two pH treatments (pH=7.60, and 7.90) over a long (six-month) experimental period. Their physiological response was measured as net calcification rate and the activity of carbonic anhydrase, a key enzyme in the calcification pathway. In the short-term experiment, net calcification rates did not significantly change with pH, although they were highly variable in the low pH treatment, including some genotypes that maintained positive net calcification in undersaturated conditions. In the six-month experiment, average net calcification was significantly reduced at low pH, with corals exhibiting net dissolution of skeleton. However, one of the same genotypes that maintained positive net calcification (+0.04% day-1) under the low pH treatment in the short-term experiment also maintained positive net calcification longer than the other genotypes in the long-term experiment, although none of the corals maintained positive calcification for the entire 6 months. Average carbonic anhydrase activity was not affected by pH, although some genotypes exhibited small, insignificant, increases in activity after the sixth month. Our results suggest that while net calcification in L. pertusa is adversely affected by ocean acidification in the long term, it is possible that some genotypes may prove to be more resilient than others, particularly to short perturbations of the carbonate system. These results provide evidence that populations of L. pertusa in the Gulf of Mexico may contain the genetic variability necessary to support an adaptive response to future ocean acidification. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2017-07-19. Dataset Lophelia pertusa North Atlantic Ocean acidification DataCite Metadata Store (German National Library of Science and Technology) Lunden ENVELOPE(6.468,6.468,62.598,62.598)