Measurements of microbial processes, dissolution, water and porewater chemistry during experiments on two coral reef sediments: Sediment characteristics

In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addi...

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Bibliographic Details
Main Author: Fink, Artur
Format: Dataset
Language:English
Published: PANGAEA - Data Publisher for Earth & Environmental Science 2017
Subjects:
Benthos
Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria <20 L
Coast and continental shelf
Entire community
Laboratory experiment
Soft-bottom community
Tropical
DATE/TIME
Origin
Sample code/label
Treatment
Replicate
Depth, nominal
Porosity
Permeability
Grains
Grain size, mean radius
Nitrogen, total
Carbon, total
Carbon, organic, total
Carbon, inorganic, total
pH
pH, standard error
Alkalinity, total
Standard error
Partial pressure of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide, standard deviation
Carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard deviation
Calcite saturation state
Aragonite saturation state
High magnesium calcite saturation state
Temperature, water
Salinity
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Calculated using seacarb after Nisumaa et al. 2010
Biological Impacts of Ocean Acidification BIOACID
Ocean acidification
Online Access:https://dx.doi.org/10.1594/pangaea.873836
https://doi.pangaea.de/10.1594/PANGAEA.873836
id ftdatacite:10.1594/pangaea.873836
record_format openpolar
spelling ftdatacite:10.1594/pangaea.873836 2023-05-15T17:50:29+02:00 Measurements of microbial processes, dissolution, water and porewater chemistry during experiments on two coral reef sediments: Sediment characteristics Fink, Artur 2017 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.873836 https://doi.pangaea.de/10.1594/PANGAEA.873836 en eng PANGAEA - Data Publisher for Earth & Environmental Science https://cran.r-project.org/package=seacarb https://dx.doi.org/10.1594/pangaea.873838 https://dx.doi.org/10.3389/fmars.2017.00073 https://cran.r-project.org/package=seacarb Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 CC-BY Benthos Biomass/Abundance/Elemental composition Bottles or small containers/Aquaria <20 L Coast and continental shelf Entire community Laboratory experiment Soft-bottom community Tropical DATE/TIME Origin Sample code/label Treatment Replicate Depth, nominal Porosity Permeability Grains Grain size, mean radius Nitrogen, total Carbon, total Carbon, organic, total Carbon, inorganic, total pH pH, standard error Alkalinity, total Standard error Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide, standard deviation Carbon, inorganic, dissolved Carbon, inorganic, dissolved, standard deviation Calcite saturation state Aragonite saturation state High magnesium calcite saturation state Temperature, water Salinity Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbonate ion Calculated using seacarb after Nisumaa et al. 2010 Biological Impacts of Ocean Acidification BIOACID Dataset dataset 2017 ftdatacite https://doi.org/10.1594/pangaea.873836 https://doi.org/10.1594/pangaea.873838 https://doi.org/10.3389/fmars.2017.00073 2022-02-09T13:11:14Z In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2017-03-22. Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology)
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Benthos
Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria <20 L
Coast and continental shelf
Entire community
Laboratory experiment
Soft-bottom community
Tropical
DATE/TIME
Origin
Sample code/label
Treatment
Replicate
Depth, nominal
Porosity
Permeability
Grains
Grain size, mean radius
Nitrogen, total
Carbon, total
Carbon, organic, total
Carbon, inorganic, total
pH
pH, standard error
Alkalinity, total
Standard error
Partial pressure of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide, standard deviation
Carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard deviation
Calcite saturation state
Aragonite saturation state
High magnesium calcite saturation state
Temperature, water
Salinity
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Calculated using seacarb after Nisumaa et al. 2010
Biological Impacts of Ocean Acidification BIOACID
spellingShingle Benthos
Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria <20 L
Coast and continental shelf
Entire community
Laboratory experiment
Soft-bottom community
Tropical
DATE/TIME
Origin
Sample code/label
Treatment
Replicate
Depth, nominal
Porosity
Permeability
Grains
Grain size, mean radius
Nitrogen, total
Carbon, total
Carbon, organic, total
Carbon, inorganic, total
pH
pH, standard error
Alkalinity, total
Standard error
Partial pressure of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide, standard deviation
Carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard deviation
Calcite saturation state
Aragonite saturation state
High magnesium calcite saturation state
Temperature, water
Salinity
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Calculated using seacarb after Nisumaa et al. 2010
Biological Impacts of Ocean Acidification BIOACID
Fink, Artur
Measurements of microbial processes, dissolution, water and porewater chemistry during experiments on two coral reef sediments: Sediment characteristics
topic_facet Benthos
Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria <20 L
Coast and continental shelf
Entire community
Laboratory experiment
Soft-bottom community
Tropical
DATE/TIME
Origin
Sample code/label
Treatment
Replicate
Depth, nominal
Porosity
Permeability
Grains
Grain size, mean radius
Nitrogen, total
Carbon, total
Carbon, organic, total
Carbon, inorganic, total
pH
pH, standard error
Alkalinity, total
Standard error
Partial pressure of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide, standard deviation
Carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard deviation
Calcite saturation state
Aragonite saturation state
High magnesium calcite saturation state
Temperature, water
Salinity
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Calculated using seacarb after Nisumaa et al. 2010
Biological Impacts of Ocean Acidification BIOACID
description In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2017-03-22.
format Dataset
author Fink, Artur
author_facet Fink, Artur
author_sort Fink, Artur
title Measurements of microbial processes, dissolution, water and porewater chemistry during experiments on two coral reef sediments: Sediment characteristics
title_short Measurements of microbial processes, dissolution, water and porewater chemistry during experiments on two coral reef sediments: Sediment characteristics
title_full Measurements of microbial processes, dissolution, water and porewater chemistry during experiments on two coral reef sediments: Sediment characteristics
title_fullStr Measurements of microbial processes, dissolution, water and porewater chemistry during experiments on two coral reef sediments: Sediment characteristics
title_full_unstemmed Measurements of microbial processes, dissolution, water and porewater chemistry during experiments on two coral reef sediments: Sediment characteristics
title_sort measurements of microbial processes, dissolution, water and porewater chemistry during experiments on two coral reef sediments: sediment characteristics
publisher PANGAEA - Data Publisher for Earth & Environmental Science
publishDate 2017
url https://dx.doi.org/10.1594/pangaea.873836
https://doi.pangaea.de/10.1594/PANGAEA.873836
genre Ocean acidification
genre_facet Ocean acidification
op_relation https://cran.r-project.org/package=seacarb
https://dx.doi.org/10.1594/pangaea.873838
https://dx.doi.org/10.3389/fmars.2017.00073
https://cran.r-project.org/package=seacarb
op_rights Creative Commons Attribution 3.0 Unported
https://creativecommons.org/licenses/by/3.0/legalcode
cc-by-3.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.1594/pangaea.873836
https://doi.org/10.1594/pangaea.873838
https://doi.org/10.3389/fmars.2017.00073
_version_ 1766157250355789824

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