Biomineral shell formation under ocean acidification: a shift from order to chaos
Biomineral production in marine organisms employs transient phases of amorphous calcium carbonate (ACC) in the construction of crystalline shells. Increasing seawater pCO2 leads to ocean acidification (OA) with a reduction in oceanic carbonate concentration which could have a negative impact on shel...
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2016
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ftdatacite:10.1594/pangaea.868601 2023-05-15T17:37:06+02:00 Biomineral shell formation under ocean acidification: a shift from order to chaos Fitzer, Susan C Chung, Peter Maccherozzi, Francesco Dhesi, Sarnjeet S Kamenos, N A Phoenix, Vernon R Cusack, Maggie 2016 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.868601 https://doi.pangaea.de/10.1594/PANGAEA.868601 en eng PANGAEA - Data Publisher for Earth & Environmental Science https://cran.r-project.org/package=seacarb https://dx.doi.org/10.1038/srep21076 https://dx.doi.org/10.5525/gla.researchdata.259 https://cran.r-project.org/package=seacarb Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode CC-BY-3.0 CC-BY Animalia Benthic animals Benthos Bottles or small containers/Aquaria <20 L Coast and continental shelf Laboratory experiment Mollusca Mytilus edulis North Atlantic Other studied parameter or process Single species Temperate Type Species Registration number of species Uniform resource locator/link to reference Treatment Energy Intensity Salinity Salinity, standard deviation Oxygen saturation Oxygen saturation, standard deviation Temperature, water Temperature, water, standard deviation Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide, standard deviation Alkalinity, total Alkalinity, total, standard deviation Calcite saturation state Aragonite saturation state Bicarbonate ion Carbonate ion Carbonate system computation flag pH Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Carbon, inorganic, dissolved Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC dataset Dataset 2016 ftdatacite https://doi.org/10.1594/pangaea.868601 https://doi.org/10.1038/srep21076 https://doi.org/10.5525/gla.researchdata.259 2021-11-05T12:55:41Z Biomineral production in marine organisms employs transient phases of amorphous calcium carbonate (ACC) in the construction of crystalline shells. Increasing seawater pCO2 leads to ocean acidification (OA) with a reduction in oceanic carbonate concentration which could have a negative impact on shell formation and therefore survival. We demonstrate significant changes in the hydrated and dehydrated forms of ACC in the aragonite and calcite layers of Mytilus edulis shells cultured under acidification conditions (1000 µatm pCO2) compared to present day conditions (380 µatm pCO2). In OA conditions, Mytilus edulis has more ACC at crystalisation sites. Here, we use the high-spatial resolution of synchrotron X-ray Photo Emission Electron Microscopy (XPEEM) combined with X-ray Absorption Spectroscopy (XAS) to investigate the influence of OA on the ACC formation in the shells of adult Mytilus edulis. Electron Backscatter Diffraction (EBSD) confirms that OA reduces crystallographic control of shell formation. The results demonstrate that OA induces more ACC formation and less crystallographic control in mussels suggesting that ACC is used as a repair mechanism to combat shell damage under OA. However, the resultant reduced crystallographic control in mussels raises concerns for shell protective function under predation and changing environments. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2015) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2016-11-15. Dataset North Atlantic Ocean acidification DataCite Metadata Store (German National Library of Science and Technology) |
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Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
English |
topic |
Animalia Benthic animals Benthos Bottles or small containers/Aquaria <20 L Coast and continental shelf Laboratory experiment Mollusca Mytilus edulis North Atlantic Other studied parameter or process Single species Temperate Type Species Registration number of species Uniform resource locator/link to reference Treatment Energy Intensity Salinity Salinity, standard deviation Oxygen saturation Oxygen saturation, standard deviation Temperature, water Temperature, water, standard deviation Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide, standard deviation Alkalinity, total Alkalinity, total, standard deviation Calcite saturation state Aragonite saturation state Bicarbonate ion Carbonate ion Carbonate system computation flag pH Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Carbon, inorganic, dissolved Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC |
spellingShingle |
Animalia Benthic animals Benthos Bottles or small containers/Aquaria <20 L Coast and continental shelf Laboratory experiment Mollusca Mytilus edulis North Atlantic Other studied parameter or process Single species Temperate Type Species Registration number of species Uniform resource locator/link to reference Treatment Energy Intensity Salinity Salinity, standard deviation Oxygen saturation Oxygen saturation, standard deviation Temperature, water Temperature, water, standard deviation Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide, standard deviation Alkalinity, total Alkalinity, total, standard deviation Calcite saturation state Aragonite saturation state Bicarbonate ion Carbonate ion Carbonate system computation flag pH Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Carbon, inorganic, dissolved Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC Fitzer, Susan C Chung, Peter Maccherozzi, Francesco Dhesi, Sarnjeet S Kamenos, N A Phoenix, Vernon R Cusack, Maggie Biomineral shell formation under ocean acidification: a shift from order to chaos |
topic_facet |
Animalia Benthic animals Benthos Bottles or small containers/Aquaria <20 L Coast and continental shelf Laboratory experiment Mollusca Mytilus edulis North Atlantic Other studied parameter or process Single species Temperate Type Species Registration number of species Uniform resource locator/link to reference Treatment Energy Intensity Salinity Salinity, standard deviation Oxygen saturation Oxygen saturation, standard deviation Temperature, water Temperature, water, standard deviation Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide, standard deviation Alkalinity, total Alkalinity, total, standard deviation Calcite saturation state Aragonite saturation state Bicarbonate ion Carbonate ion Carbonate system computation flag pH Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Carbon, inorganic, dissolved Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC |
description |
Biomineral production in marine organisms employs transient phases of amorphous calcium carbonate (ACC) in the construction of crystalline shells. Increasing seawater pCO2 leads to ocean acidification (OA) with a reduction in oceanic carbonate concentration which could have a negative impact on shell formation and therefore survival. We demonstrate significant changes in the hydrated and dehydrated forms of ACC in the aragonite and calcite layers of Mytilus edulis shells cultured under acidification conditions (1000 µatm pCO2) compared to present day conditions (380 µatm pCO2). In OA conditions, Mytilus edulis has more ACC at crystalisation sites. Here, we use the high-spatial resolution of synchrotron X-ray Photo Emission Electron Microscopy (XPEEM) combined with X-ray Absorption Spectroscopy (XAS) to investigate the influence of OA on the ACC formation in the shells of adult Mytilus edulis. Electron Backscatter Diffraction (EBSD) confirms that OA reduces crystallographic control of shell formation. The results demonstrate that OA induces more ACC formation and less crystallographic control in mussels suggesting that ACC is used as a repair mechanism to combat shell damage under OA. However, the resultant reduced crystallographic control in mussels raises concerns for shell protective function under predation and changing environments. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2015) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2016-11-15. |
format |
Dataset |
author |
Fitzer, Susan C Chung, Peter Maccherozzi, Francesco Dhesi, Sarnjeet S Kamenos, N A Phoenix, Vernon R Cusack, Maggie |
author_facet |
Fitzer, Susan C Chung, Peter Maccherozzi, Francesco Dhesi, Sarnjeet S Kamenos, N A Phoenix, Vernon R Cusack, Maggie |
author_sort |
Fitzer, Susan C |
title |
Biomineral shell formation under ocean acidification: a shift from order to chaos |
title_short |
Biomineral shell formation under ocean acidification: a shift from order to chaos |
title_full |
Biomineral shell formation under ocean acidification: a shift from order to chaos |
title_fullStr |
Biomineral shell formation under ocean acidification: a shift from order to chaos |
title_full_unstemmed |
Biomineral shell formation under ocean acidification: a shift from order to chaos |
title_sort |
biomineral shell formation under ocean acidification: a shift from order to chaos |
publisher |
PANGAEA - Data Publisher for Earth & Environmental Science |
publishDate |
2016 |
url |
https://dx.doi.org/10.1594/pangaea.868601 https://doi.pangaea.de/10.1594/PANGAEA.868601 |
genre |
North Atlantic Ocean acidification |
genre_facet |
North Atlantic Ocean acidification |
op_relation |
https://cran.r-project.org/package=seacarb https://dx.doi.org/10.1038/srep21076 https://dx.doi.org/10.5525/gla.researchdata.259 https://cran.r-project.org/package=seacarb |
op_rights |
Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode CC-BY-3.0 |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.1594/pangaea.868601 https://doi.org/10.1038/srep21076 https://doi.org/10.5525/gla.researchdata.259 |
_version_ |
1766136841045540864 |