Coral pH regulation of the calcifying fluid is modulated by seawater dissolved inorganic carbon concentration ...

Reef coral calcification depends on regulation of pH in the internal calcifying fluid in which the coral skeleton forms. However, little is known about calcifying fluid pH (pHCF) regulation, despite its importance in determining the response of corals to ocean acidification. Here, we investigate the...

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Main Authors: Comeau, Steeve, Tambutté, Eric, Carpenter, Robert C, Edmunds, Peter J, Evensen, Nicolas R, Allemand, Denis, Ferrier-Pagès, Christine, Tambutté, Sylvie, Venn, Alexander A
Format: Dataset
Language:English
Published: PANGAEA 2017
Subjects:
pH
Online Access:https://dx.doi.org/10.1594/pangaea.868353
https://doi.pangaea.de/10.1594/PANGAEA.868353
id ftdatacite:10.1594/pangaea.868353
record_format openpolar
spelling ftdatacite:10.1594/pangaea.868353 2024-02-27T08:44:13+00:00 Coral pH regulation of the calcifying fluid is modulated by seawater dissolved inorganic carbon concentration ... Comeau, Steeve Tambutté, Eric Carpenter, Robert C Edmunds, Peter J Evensen, Nicolas R Allemand, Denis Ferrier-Pagès, Christine Tambutté, Sylvie Venn, Alexander A 2017 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.868353 https://doi.pangaea.de/10.1594/PANGAEA.868353 en eng PANGAEA https://cran.r-project.org/package=seacarb https://dx.doi.org/10.1098/rspb.2016.1669 https://cran.r-project.org/package=seacarb Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 Acid-base regulation Animalia Benthic animals Benthos Calcification/Dissolution Cnidaria Containers and aquaria 20-1000 L or < 1 m**2 Laboratory experiment Laboratory strains Not applicable Primary production/Photosynthesis Respiration Single species Stylophora pistillata Type Species Registration number of species Uniform resource locator/link to reference Figure Treatment Photosynthesis rate of oxygen, per symbiont cell Net photosynthesis rate, oxygen, standard error Gross photosynthesis rate, oxygen, standard error Respiration rate, oxygen Respiration rate, oxygen, standard error Calcification rate of calcium carbonate Calcification rate, standard error Calcifying fluid, pH Calcifying fluid, pH, standard error pH pH, standard error Alkalinity, total Alkalinity, total, standard error Salinity Temperature, water Temperature, water, standard error Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbonate ion Carbon, inorganic, dissolved Aragonite saturation state Calcite saturation state Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC dataset Supplementary Dataset Dataset 2017 ftdatacite https://doi.org/10.1594/pangaea.86835310.1098/rspb.2016.1669 2024-02-01T15:26:49Z Reef coral calcification depends on regulation of pH in the internal calcifying fluid in which the coral skeleton forms. However, little is known about calcifying fluid pH (pHCF) regulation, despite its importance in determining the response of corals to ocean acidification. Here, we investigate the impact of seawater dissolved inorganic carbon (DIC) concentration on calcifying fluid pH in the coral Stylophora pistillata in seawater with manipulated [DIC] and constant pH. Our results reveal that regulation of pHCF and calcification rates are sensitive to changes in seawater [DIC] in the light and dark. While part of this relationship can be explained by changes in rates of photosynthesis and respiration, our data point to the importance of seawater DIC in pH regulation of the coral's calcifying cells. Our findings contribute towards a mechanistic understanding of how and why coral calcification is sensitive to changes in seawater carbonate chemistry, which is needed for predicting effects of environmental ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2015) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2016-11-14. ... Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology)
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Acid-base regulation
Animalia
Benthic animals
Benthos
Calcification/Dissolution
Cnidaria
Containers and aquaria 20-1000 L or < 1 m**2
Laboratory experiment
Laboratory strains
Not applicable
Primary production/Photosynthesis
Respiration
Single species
Stylophora pistillata
Type
Species
Registration number of species
Uniform resource locator/link to reference
Figure
Treatment
Photosynthesis rate of oxygen, per symbiont cell
Net photosynthesis rate, oxygen, standard error
Gross photosynthesis rate, oxygen, standard error
Respiration rate, oxygen
Respiration rate, oxygen, standard error
Calcification rate of calcium carbonate
Calcification rate, standard error
Calcifying fluid, pH
Calcifying fluid, pH, standard error
pH
pH, standard error
Alkalinity, total
Alkalinity, total, standard error
Salinity
Temperature, water
Temperature, water, standard error
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Carbon, inorganic, dissolved
Aragonite saturation state
Calcite saturation state
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
spellingShingle Acid-base regulation
Animalia
Benthic animals
Benthos
Calcification/Dissolution
Cnidaria
Containers and aquaria 20-1000 L or < 1 m**2
Laboratory experiment
Laboratory strains
Not applicable
Primary production/Photosynthesis
Respiration
Single species
Stylophora pistillata
Type
Species
Registration number of species
Uniform resource locator/link to reference
Figure
Treatment
Photosynthesis rate of oxygen, per symbiont cell
Net photosynthesis rate, oxygen, standard error
Gross photosynthesis rate, oxygen, standard error
Respiration rate, oxygen
Respiration rate, oxygen, standard error
Calcification rate of calcium carbonate
Calcification rate, standard error
Calcifying fluid, pH
Calcifying fluid, pH, standard error
pH
pH, standard error
Alkalinity, total
Alkalinity, total, standard error
Salinity
Temperature, water
Temperature, water, standard error
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Carbon, inorganic, dissolved
Aragonite saturation state
Calcite saturation state
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
Comeau, Steeve
Tambutté, Eric
Carpenter, Robert C
Edmunds, Peter J
Evensen, Nicolas R
Allemand, Denis
Ferrier-Pagès, Christine
Tambutté, Sylvie
Venn, Alexander A
Coral pH regulation of the calcifying fluid is modulated by seawater dissolved inorganic carbon concentration ...
topic_facet Acid-base regulation
Animalia
Benthic animals
Benthos
Calcification/Dissolution
Cnidaria
Containers and aquaria 20-1000 L or < 1 m**2
Laboratory experiment
Laboratory strains
Not applicable
Primary production/Photosynthesis
Respiration
Single species
Stylophora pistillata
Type
Species
Registration number of species
Uniform resource locator/link to reference
Figure
Treatment
Photosynthesis rate of oxygen, per symbiont cell
Net photosynthesis rate, oxygen, standard error
Gross photosynthesis rate, oxygen, standard error
Respiration rate, oxygen
Respiration rate, oxygen, standard error
Calcification rate of calcium carbonate
Calcification rate, standard error
Calcifying fluid, pH
Calcifying fluid, pH, standard error
pH
pH, standard error
Alkalinity, total
Alkalinity, total, standard error
Salinity
Temperature, water
Temperature, water, standard error
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Carbon, inorganic, dissolved
Aragonite saturation state
Calcite saturation state
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
description Reef coral calcification depends on regulation of pH in the internal calcifying fluid in which the coral skeleton forms. However, little is known about calcifying fluid pH (pHCF) regulation, despite its importance in determining the response of corals to ocean acidification. Here, we investigate the impact of seawater dissolved inorganic carbon (DIC) concentration on calcifying fluid pH in the coral Stylophora pistillata in seawater with manipulated [DIC] and constant pH. Our results reveal that regulation of pHCF and calcification rates are sensitive to changes in seawater [DIC] in the light and dark. While part of this relationship can be explained by changes in rates of photosynthesis and respiration, our data point to the importance of seawater DIC in pH regulation of the coral's calcifying cells. Our findings contribute towards a mechanistic understanding of how and why coral calcification is sensitive to changes in seawater carbonate chemistry, which is needed for predicting effects of environmental ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2015) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2016-11-14. ...
format Dataset
author Comeau, Steeve
Tambutté, Eric
Carpenter, Robert C
Edmunds, Peter J
Evensen, Nicolas R
Allemand, Denis
Ferrier-Pagès, Christine
Tambutté, Sylvie
Venn, Alexander A
author_facet Comeau, Steeve
Tambutté, Eric
Carpenter, Robert C
Edmunds, Peter J
Evensen, Nicolas R
Allemand, Denis
Ferrier-Pagès, Christine
Tambutté, Sylvie
Venn, Alexander A
author_sort Comeau, Steeve
title Coral pH regulation of the calcifying fluid is modulated by seawater dissolved inorganic carbon concentration ...
title_short Coral pH regulation of the calcifying fluid is modulated by seawater dissolved inorganic carbon concentration ...
title_full Coral pH regulation of the calcifying fluid is modulated by seawater dissolved inorganic carbon concentration ...
title_fullStr Coral pH regulation of the calcifying fluid is modulated by seawater dissolved inorganic carbon concentration ...
title_full_unstemmed Coral pH regulation of the calcifying fluid is modulated by seawater dissolved inorganic carbon concentration ...
title_sort coral ph regulation of the calcifying fluid is modulated by seawater dissolved inorganic carbon concentration ...
publisher PANGAEA
publishDate 2017
url https://dx.doi.org/10.1594/pangaea.868353
https://doi.pangaea.de/10.1594/PANGAEA.868353
genre Ocean acidification
genre_facet Ocean acidification
op_relation https://cran.r-project.org/package=seacarb
https://dx.doi.org/10.1098/rspb.2016.1669
https://cran.r-project.org/package=seacarb
op_rights Creative Commons Attribution 3.0 Unported
https://creativecommons.org/licenses/by/3.0/legalcode
cc-by-3.0
op_doi https://doi.org/10.1594/pangaea.86835310.1098/rspb.2016.1669
_version_ 1792052601829720064