Collecting information and identification of New England Seamount Geodia species ...
We report the first records of the sponge genus Geodia (Demospongiae, Tetractinellida, Geodiidae) from the New England Seamounts and Muir Seamount, at lower bathyal depths. Nine specimens collected between 2000 and 2005 belong to two boreal species (Geodia macandrewii and Geodia barretti) and a temp...
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Online Access: | https://dx.doi.org/10.1594/pangaea.867276 https://doi.pangaea.de/10.1594/PANGAEA.867276 |
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ftdatacite:10.1594/pangaea.867276 2024-04-28T08:30:58+00:00 Collecting information and identification of New England Seamount Geodia species ... Cárdenas, Paco Moore, Jon A 2016 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.867276 https://doi.pangaea.de/10.1594/PANGAEA.867276 en eng PANGAEA https://dx.doi.org/10.1007/s12526-017-0775-3 Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 Event label LATITUDE LONGITUDE Sample comment Description DATE/TIME Area/locality Campaign Sample elevation Collection Uniform resource locator/link to metadata file Treatment Identification Species Investigator Submersible Alvin Otter trawl Remote operated vehicle AT07-35 AT08-01 AT12-01 DE00-11 DE02-06 RB200404B Atlantis 1997 Delaware II Ronald H. Brown Deep-sea Sponge Grounds Ecosystems of the North Atlantic SponGES dataset Supplementary Dataset Dataset 2016 ftdatacite https://doi.org/10.1594/pangaea.86727610.1007/s12526-017-0775-3 2024-04-02T10:07:20Z We report the first records of the sponge genus Geodia (Demospongiae, Tetractinellida, Geodiidae) from the New England Seamounts and Muir Seamount, at lower bathyal depths. Nine specimens collected between 2000 and 2005 belong to two boreal species (Geodia macandrewii and Geodia barretti) and a temperate species (Geodia megastrella). These records extend the distributions of these deep-sea amphi-Atlantic species to the west. Most of these specimens were originally fixed in formalin, which substantially degraded the DNA. We nonetheless managed to sequence two cytochrome c oxidase subunit I (COI) mini-barcodes: the universal mini-barcode at the 5' end of the Folmer barcode (130 bp) and a newly proposed mini-barcode at the 3' end of the Folmer barcode (296 bp). These mini-barcodes unambiguously confirmed our identifications. As an additional test, we also successfully sequenced these two mini-barcodes from the holotype of G. barretti, collected in 1855. We conclude by advocating the use of mini-barcodes on ... : This dataset gives the collecting information of New England Seamount Geodia species from the Yale Peabody Museum. Museum numbers, fixation processing and Genbank accession numbers are also given. ... Dataset North Atlantic DataCite Metadata Store (German National Library of Science and Technology) |
institution |
Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
English |
topic |
Event label LATITUDE LONGITUDE Sample comment Description DATE/TIME Area/locality Campaign Sample elevation Collection Uniform resource locator/link to metadata file Treatment Identification Species Investigator Submersible Alvin Otter trawl Remote operated vehicle AT07-35 AT08-01 AT12-01 DE00-11 DE02-06 RB200404B Atlantis 1997 Delaware II Ronald H. Brown Deep-sea Sponge Grounds Ecosystems of the North Atlantic SponGES |
spellingShingle |
Event label LATITUDE LONGITUDE Sample comment Description DATE/TIME Area/locality Campaign Sample elevation Collection Uniform resource locator/link to metadata file Treatment Identification Species Investigator Submersible Alvin Otter trawl Remote operated vehicle AT07-35 AT08-01 AT12-01 DE00-11 DE02-06 RB200404B Atlantis 1997 Delaware II Ronald H. Brown Deep-sea Sponge Grounds Ecosystems of the North Atlantic SponGES Cárdenas, Paco Moore, Jon A Collecting information and identification of New England Seamount Geodia species ... |
topic_facet |
Event label LATITUDE LONGITUDE Sample comment Description DATE/TIME Area/locality Campaign Sample elevation Collection Uniform resource locator/link to metadata file Treatment Identification Species Investigator Submersible Alvin Otter trawl Remote operated vehicle AT07-35 AT08-01 AT12-01 DE00-11 DE02-06 RB200404B Atlantis 1997 Delaware II Ronald H. Brown Deep-sea Sponge Grounds Ecosystems of the North Atlantic SponGES |
description |
We report the first records of the sponge genus Geodia (Demospongiae, Tetractinellida, Geodiidae) from the New England Seamounts and Muir Seamount, at lower bathyal depths. Nine specimens collected between 2000 and 2005 belong to two boreal species (Geodia macandrewii and Geodia barretti) and a temperate species (Geodia megastrella). These records extend the distributions of these deep-sea amphi-Atlantic species to the west. Most of these specimens were originally fixed in formalin, which substantially degraded the DNA. We nonetheless managed to sequence two cytochrome c oxidase subunit I (COI) mini-barcodes: the universal mini-barcode at the 5' end of the Folmer barcode (130 bp) and a newly proposed mini-barcode at the 3' end of the Folmer barcode (296 bp). These mini-barcodes unambiguously confirmed our identifications. As an additional test, we also successfully sequenced these two mini-barcodes from the holotype of G. barretti, collected in 1855. We conclude by advocating the use of mini-barcodes on ... : This dataset gives the collecting information of New England Seamount Geodia species from the Yale Peabody Museum. Museum numbers, fixation processing and Genbank accession numbers are also given. ... |
format |
Dataset |
author |
Cárdenas, Paco Moore, Jon A |
author_facet |
Cárdenas, Paco Moore, Jon A |
author_sort |
Cárdenas, Paco |
title |
Collecting information and identification of New England Seamount Geodia species ... |
title_short |
Collecting information and identification of New England Seamount Geodia species ... |
title_full |
Collecting information and identification of New England Seamount Geodia species ... |
title_fullStr |
Collecting information and identification of New England Seamount Geodia species ... |
title_full_unstemmed |
Collecting information and identification of New England Seamount Geodia species ... |
title_sort |
collecting information and identification of new england seamount geodia species ... |
publisher |
PANGAEA |
publishDate |
2016 |
url |
https://dx.doi.org/10.1594/pangaea.867276 https://doi.pangaea.de/10.1594/PANGAEA.867276 |
genre |
North Atlantic |
genre_facet |
North Atlantic |
op_relation |
https://dx.doi.org/10.1007/s12526-017-0775-3 |
op_rights |
Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 |
op_doi |
https://doi.org/10.1594/pangaea.86727610.1007/s12526-017-0775-3 |
_version_ |
1797588661809709056 |