Collecting information and identification of New England Seamount Geodia species ...

We report the first records of the sponge genus Geodia (Demospongiae, Tetractinellida, Geodiidae) from the New England Seamounts and Muir Seamount, at lower bathyal depths. Nine specimens collected between 2000 and 2005 belong to two boreal species (Geodia macandrewii and Geodia barretti) and a temp...

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Bibliographic Details
Main Authors: Cárdenas, Paco, Moore, Jon A
Format: Dataset
Language:English
Published: PANGAEA 2016
Subjects:
Online Access:https://dx.doi.org/10.1594/pangaea.867276
https://doi.pangaea.de/10.1594/PANGAEA.867276
id ftdatacite:10.1594/pangaea.867276
record_format openpolar
spelling ftdatacite:10.1594/pangaea.867276 2024-04-28T08:30:58+00:00 Collecting information and identification of New England Seamount Geodia species ... Cárdenas, Paco Moore, Jon A 2016 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.867276 https://doi.pangaea.de/10.1594/PANGAEA.867276 en eng PANGAEA https://dx.doi.org/10.1007/s12526-017-0775-3 Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 Event label LATITUDE LONGITUDE Sample comment Description DATE/TIME Area/locality Campaign Sample elevation Collection Uniform resource locator/link to metadata file Treatment Identification Species Investigator Submersible Alvin Otter trawl Remote operated vehicle AT07-35 AT08-01 AT12-01 DE00-11 DE02-06 RB200404B Atlantis 1997 Delaware II Ronald H. Brown Deep-sea Sponge Grounds Ecosystems of the North Atlantic SponGES dataset Supplementary Dataset Dataset 2016 ftdatacite https://doi.org/10.1594/pangaea.86727610.1007/s12526-017-0775-3 2024-04-02T10:07:20Z We report the first records of the sponge genus Geodia (Demospongiae, Tetractinellida, Geodiidae) from the New England Seamounts and Muir Seamount, at lower bathyal depths. Nine specimens collected between 2000 and 2005 belong to two boreal species (Geodia macandrewii and Geodia barretti) and a temperate species (Geodia megastrella). These records extend the distributions of these deep-sea amphi-Atlantic species to the west. Most of these specimens were originally fixed in formalin, which substantially degraded the DNA. We nonetheless managed to sequence two cytochrome c oxidase subunit I (COI) mini-barcodes: the universal mini-barcode at the 5' end of the Folmer barcode (130 bp) and a newly proposed mini-barcode at the 3' end of the Folmer barcode (296 bp). These mini-barcodes unambiguously confirmed our identifications. As an additional test, we also successfully sequenced these two mini-barcodes from the holotype of G. barretti, collected in 1855. We conclude by advocating the use of mini-barcodes on ... : This dataset gives the collecting information of New England Seamount Geodia species from the Yale Peabody Museum. Museum numbers, fixation processing and Genbank accession numbers are also given. ... Dataset North Atlantic DataCite Metadata Store (German National Library of Science and Technology)
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Event label
LATITUDE
LONGITUDE
Sample comment
Description
DATE/TIME
Area/locality
Campaign
Sample elevation
Collection
Uniform resource locator/link to metadata file
Treatment
Identification
Species
Investigator
Submersible Alvin
Otter trawl
Remote operated vehicle
AT07-35
AT08-01
AT12-01
DE00-11
DE02-06
RB200404B
Atlantis 1997
Delaware II
Ronald H. Brown
Deep-sea Sponge Grounds Ecosystems of the North Atlantic SponGES
spellingShingle Event label
LATITUDE
LONGITUDE
Sample comment
Description
DATE/TIME
Area/locality
Campaign
Sample elevation
Collection
Uniform resource locator/link to metadata file
Treatment
Identification
Species
Investigator
Submersible Alvin
Otter trawl
Remote operated vehicle
AT07-35
AT08-01
AT12-01
DE00-11
DE02-06
RB200404B
Atlantis 1997
Delaware II
Ronald H. Brown
Deep-sea Sponge Grounds Ecosystems of the North Atlantic SponGES
Cárdenas, Paco
Moore, Jon A
Collecting information and identification of New England Seamount Geodia species ...
topic_facet Event label
LATITUDE
LONGITUDE
Sample comment
Description
DATE/TIME
Area/locality
Campaign
Sample elevation
Collection
Uniform resource locator/link to metadata file
Treatment
Identification
Species
Investigator
Submersible Alvin
Otter trawl
Remote operated vehicle
AT07-35
AT08-01
AT12-01
DE00-11
DE02-06
RB200404B
Atlantis 1997
Delaware II
Ronald H. Brown
Deep-sea Sponge Grounds Ecosystems of the North Atlantic SponGES
description We report the first records of the sponge genus Geodia (Demospongiae, Tetractinellida, Geodiidae) from the New England Seamounts and Muir Seamount, at lower bathyal depths. Nine specimens collected between 2000 and 2005 belong to two boreal species (Geodia macandrewii and Geodia barretti) and a temperate species (Geodia megastrella). These records extend the distributions of these deep-sea amphi-Atlantic species to the west. Most of these specimens were originally fixed in formalin, which substantially degraded the DNA. We nonetheless managed to sequence two cytochrome c oxidase subunit I (COI) mini-barcodes: the universal mini-barcode at the 5' end of the Folmer barcode (130 bp) and a newly proposed mini-barcode at the 3' end of the Folmer barcode (296 bp). These mini-barcodes unambiguously confirmed our identifications. As an additional test, we also successfully sequenced these two mini-barcodes from the holotype of G. barretti, collected in 1855. We conclude by advocating the use of mini-barcodes on ... : This dataset gives the collecting information of New England Seamount Geodia species from the Yale Peabody Museum. Museum numbers, fixation processing and Genbank accession numbers are also given. ...
format Dataset
author Cárdenas, Paco
Moore, Jon A
author_facet Cárdenas, Paco
Moore, Jon A
author_sort Cárdenas, Paco
title Collecting information and identification of New England Seamount Geodia species ...
title_short Collecting information and identification of New England Seamount Geodia species ...
title_full Collecting information and identification of New England Seamount Geodia species ...
title_fullStr Collecting information and identification of New England Seamount Geodia species ...
title_full_unstemmed Collecting information and identification of New England Seamount Geodia species ...
title_sort collecting information and identification of new england seamount geodia species ...
publisher PANGAEA
publishDate 2016
url https://dx.doi.org/10.1594/pangaea.867276
https://doi.pangaea.de/10.1594/PANGAEA.867276
genre North Atlantic
genre_facet North Atlantic
op_relation https://dx.doi.org/10.1007/s12526-017-0775-3
op_rights Creative Commons Attribution 3.0 Unported
https://creativecommons.org/licenses/by/3.0/legalcode
cc-by-3.0
op_doi https://doi.org/10.1594/pangaea.86727610.1007/s12526-017-0775-3
_version_ 1797588661809709056