The nitrogen costs of photosynthesis in a diatom under current and future pCO2, supplement to: Li, Gang; Brown, Christopher M; Jeans, Jennifer A; Donaher, Natalie A; McCarthy, Avery; Campbell, Douglas A (2015): The nitrogen costs of photosynthesis in a diatom under current and future pCO2. New Phytologist, 205(2), 533-543
With each cellular generation, oxygenic photoautotrophs must accumulate abundant protein complexes that mediate light capture, photosynthetic electron transport and carbon fixation. In addition to this net synthesis, oxygenic photoautotrophs must counter the light-dependent photoinactivation of Phot...
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Language: | English |
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PANGAEA - Data Publisher for Earth & Environmental Science
2015
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Online Access: | https://dx.doi.org/10.1594/pangaea.847792 https://doi.pangaea.de/10.1594/PANGAEA.847792 |
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ftdatacite:10.1594/pangaea.847792 |
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record_format |
openpolar |
institution |
Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
English |
topic |
Biomass/Abundance/Elemental composition Bottles or small containers/Aquaria <20 L Chromista Growth/Morphology Laboratory experiment Laboratory strains Light Not applicable Ochrophyta Pelagos Phytoplankton Primary production/Photosynthesis Single species Thalassiosira pseudonana Species Irradiance Treatment Growth rate Identification Cell biovolume Protein per cell Nitrogen content per cell Chlorophyll a per cell Ratio Chlorophyll c per cell Fucoxanthin chlorophyll protein per cell Photosynthetic protein PsbC Photosynthetic protein PsbA Photosynthetic protein PsbD Photosynthetic protein Rubisco Cytochrome c1 Temperature, water Salinity Carbon, inorganic, dissolved pH Partial pressure of carbon dioxide water at sea surface temperature wet air Alkalinity, total Bicarbonate ion Carbonate ion Carbon dioxide Phosphate Silicate Carbonate system computation flag Fugacity of carbon dioxide water at sea surface temperature wet air Aragonite saturation state Calcite saturation state Potentiometric Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC |
spellingShingle |
Biomass/Abundance/Elemental composition Bottles or small containers/Aquaria <20 L Chromista Growth/Morphology Laboratory experiment Laboratory strains Light Not applicable Ochrophyta Pelagos Phytoplankton Primary production/Photosynthesis Single species Thalassiosira pseudonana Species Irradiance Treatment Growth rate Identification Cell biovolume Protein per cell Nitrogen content per cell Chlorophyll a per cell Ratio Chlorophyll c per cell Fucoxanthin chlorophyll protein per cell Photosynthetic protein PsbC Photosynthetic protein PsbA Photosynthetic protein PsbD Photosynthetic protein Rubisco Cytochrome c1 Temperature, water Salinity Carbon, inorganic, dissolved pH Partial pressure of carbon dioxide water at sea surface temperature wet air Alkalinity, total Bicarbonate ion Carbonate ion Carbon dioxide Phosphate Silicate Carbonate system computation flag Fugacity of carbon dioxide water at sea surface temperature wet air Aragonite saturation state Calcite saturation state Potentiometric Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC Li, Gang Brown, Christopher M Jeans, Jennifer A Donaher, Natalie A McCarthy, Avery Campbell, Douglas A The nitrogen costs of photosynthesis in a diatom under current and future pCO2, supplement to: Li, Gang; Brown, Christopher M; Jeans, Jennifer A; Donaher, Natalie A; McCarthy, Avery; Campbell, Douglas A (2015): The nitrogen costs of photosynthesis in a diatom under current and future pCO2. New Phytologist, 205(2), 533-543 |
topic_facet |
Biomass/Abundance/Elemental composition Bottles or small containers/Aquaria <20 L Chromista Growth/Morphology Laboratory experiment Laboratory strains Light Not applicable Ochrophyta Pelagos Phytoplankton Primary production/Photosynthesis Single species Thalassiosira pseudonana Species Irradiance Treatment Growth rate Identification Cell biovolume Protein per cell Nitrogen content per cell Chlorophyll a per cell Ratio Chlorophyll c per cell Fucoxanthin chlorophyll protein per cell Photosynthetic protein PsbC Photosynthetic protein PsbA Photosynthetic protein PsbD Photosynthetic protein Rubisco Cytochrome c1 Temperature, water Salinity Carbon, inorganic, dissolved pH Partial pressure of carbon dioxide water at sea surface temperature wet air Alkalinity, total Bicarbonate ion Carbonate ion Carbon dioxide Phosphate Silicate Carbonate system computation flag Fugacity of carbon dioxide water at sea surface temperature wet air Aragonite saturation state Calcite saturation state Potentiometric Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC |
description |
With each cellular generation, oxygenic photoautotrophs must accumulate abundant protein complexes that mediate light capture, photosynthetic electron transport and carbon fixation. In addition to this net synthesis, oxygenic photoautotrophs must counter the light-dependent photoinactivation of Photosystem II (PSII), using metabolically expensive proteolysis, disassembly, resynthesis and re-assembly of protein subunits. We used growth rates, elemental analyses and protein quantitations to estimate the nitrogen (N) metabolism costs to both accumulate the photosynthetic system and to maintain PSII function in the diatom Thalassiosira pseudonana, growing at two pCO2 levels across a range of light levels. The photosynthetic system contains c. 15-25% of total cellular N. Under low growth light, N (re)cycling through PSII repair is only c. 1% of the cellular N assimilation rate. As growth light increases to inhibitory levels, N metabolite cycling through PSII repair increases to c. 14% of the cellular N assimilation rate. Cells growing under the assumed future 750 ppmv pCO2 show higher growth rates under optimal light, coinciding with a lowered N metabolic cost to maintain photosynthesis, but then suffer greater photoinhibition of growth under excess light, coincident with rising costs to maintain photosynthesis. We predict this quantitative trait response to light will vary across taxa. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2015) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2015-07-03. |
format |
Dataset |
author |
Li, Gang Brown, Christopher M Jeans, Jennifer A Donaher, Natalie A McCarthy, Avery Campbell, Douglas A |
author_facet |
Li, Gang Brown, Christopher M Jeans, Jennifer A Donaher, Natalie A McCarthy, Avery Campbell, Douglas A |
author_sort |
Li, Gang |
title |
The nitrogen costs of photosynthesis in a diatom under current and future pCO2, supplement to: Li, Gang; Brown, Christopher M; Jeans, Jennifer A; Donaher, Natalie A; McCarthy, Avery; Campbell, Douglas A (2015): The nitrogen costs of photosynthesis in a diatom under current and future pCO2. New Phytologist, 205(2), 533-543 |
title_short |
The nitrogen costs of photosynthesis in a diatom under current and future pCO2, supplement to: Li, Gang; Brown, Christopher M; Jeans, Jennifer A; Donaher, Natalie A; McCarthy, Avery; Campbell, Douglas A (2015): The nitrogen costs of photosynthesis in a diatom under current and future pCO2. New Phytologist, 205(2), 533-543 |
title_full |
The nitrogen costs of photosynthesis in a diatom under current and future pCO2, supplement to: Li, Gang; Brown, Christopher M; Jeans, Jennifer A; Donaher, Natalie A; McCarthy, Avery; Campbell, Douglas A (2015): The nitrogen costs of photosynthesis in a diatom under current and future pCO2. New Phytologist, 205(2), 533-543 |
title_fullStr |
The nitrogen costs of photosynthesis in a diatom under current and future pCO2, supplement to: Li, Gang; Brown, Christopher M; Jeans, Jennifer A; Donaher, Natalie A; McCarthy, Avery; Campbell, Douglas A (2015): The nitrogen costs of photosynthesis in a diatom under current and future pCO2. New Phytologist, 205(2), 533-543 |
title_full_unstemmed |
The nitrogen costs of photosynthesis in a diatom under current and future pCO2, supplement to: Li, Gang; Brown, Christopher M; Jeans, Jennifer A; Donaher, Natalie A; McCarthy, Avery; Campbell, Douglas A (2015): The nitrogen costs of photosynthesis in a diatom under current and future pCO2. New Phytologist, 205(2), 533-543 |
title_sort |
nitrogen costs of photosynthesis in a diatom under current and future pco2, supplement to: li, gang; brown, christopher m; jeans, jennifer a; donaher, natalie a; mccarthy, avery; campbell, douglas a (2015): the nitrogen costs of photosynthesis in a diatom under current and future pco2. new phytologist, 205(2), 533-543 |
publisher |
PANGAEA - Data Publisher for Earth & Environmental Science |
publishDate |
2015 |
url |
https://dx.doi.org/10.1594/pangaea.847792 https://doi.pangaea.de/10.1594/PANGAEA.847792 |
long_lat |
ENVELOPE(-65.433,-65.433,-66.883,-66.883) ENVELOPE(66.543,66.543,-70.404,-70.404) |
geographic |
Avery McCarthy |
geographic_facet |
Avery McCarthy |
genre |
Ocean acidification |
genre_facet |
Ocean acidification |
op_relation |
https://cran.r-project.org/package=seacarb https://dx.doi.org/10.1111/nph.13037 https://cran.r-project.org/package=seacarb |
op_rights |
Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.1594/pangaea.847792 https://doi.org/10.1111/nph.13037 |
_version_ |
1766158473872015360 |
spelling |
ftdatacite:10.1594/pangaea.847792 2023-05-15T17:51:21+02:00 The nitrogen costs of photosynthesis in a diatom under current and future pCO2, supplement to: Li, Gang; Brown, Christopher M; Jeans, Jennifer A; Donaher, Natalie A; McCarthy, Avery; Campbell, Douglas A (2015): The nitrogen costs of photosynthesis in a diatom under current and future pCO2. New Phytologist, 205(2), 533-543 Li, Gang Brown, Christopher M Jeans, Jennifer A Donaher, Natalie A McCarthy, Avery Campbell, Douglas A 2015 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.847792 https://doi.pangaea.de/10.1594/PANGAEA.847792 en eng PANGAEA - Data Publisher for Earth & Environmental Science https://cran.r-project.org/package=seacarb https://dx.doi.org/10.1111/nph.13037 https://cran.r-project.org/package=seacarb Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 CC-BY Biomass/Abundance/Elemental composition Bottles or small containers/Aquaria <20 L Chromista Growth/Morphology Laboratory experiment Laboratory strains Light Not applicable Ochrophyta Pelagos Phytoplankton Primary production/Photosynthesis Single species Thalassiosira pseudonana Species Irradiance Treatment Growth rate Identification Cell biovolume Protein per cell Nitrogen content per cell Chlorophyll a per cell Ratio Chlorophyll c per cell Fucoxanthin chlorophyll protein per cell Photosynthetic protein PsbC Photosynthetic protein PsbA Photosynthetic protein PsbD Photosynthetic protein Rubisco Cytochrome c1 Temperature, water Salinity Carbon, inorganic, dissolved pH Partial pressure of carbon dioxide water at sea surface temperature wet air Alkalinity, total Bicarbonate ion Carbonate ion Carbon dioxide Phosphate Silicate Carbonate system computation flag Fugacity of carbon dioxide water at sea surface temperature wet air Aragonite saturation state Calcite saturation state Potentiometric Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC Supplementary Dataset dataset Dataset 2015 ftdatacite https://doi.org/10.1594/pangaea.847792 https://doi.org/10.1111/nph.13037 2022-02-08T16:27:35Z With each cellular generation, oxygenic photoautotrophs must accumulate abundant protein complexes that mediate light capture, photosynthetic electron transport and carbon fixation. In addition to this net synthesis, oxygenic photoautotrophs must counter the light-dependent photoinactivation of Photosystem II (PSII), using metabolically expensive proteolysis, disassembly, resynthesis and re-assembly of protein subunits. We used growth rates, elemental analyses and protein quantitations to estimate the nitrogen (N) metabolism costs to both accumulate the photosynthetic system and to maintain PSII function in the diatom Thalassiosira pseudonana, growing at two pCO2 levels across a range of light levels. The photosynthetic system contains c. 15-25% of total cellular N. Under low growth light, N (re)cycling through PSII repair is only c. 1% of the cellular N assimilation rate. As growth light increases to inhibitory levels, N metabolite cycling through PSII repair increases to c. 14% of the cellular N assimilation rate. Cells growing under the assumed future 750 ppmv pCO2 show higher growth rates under optimal light, coinciding with a lowered N metabolic cost to maintain photosynthesis, but then suffer greater photoinhibition of growth under excess light, coincident with rising costs to maintain photosynthesis. We predict this quantitative trait response to light will vary across taxa. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2015) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2015-07-03. Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology) Avery ENVELOPE(-65.433,-65.433,-66.883,-66.883) McCarthy ENVELOPE(66.543,66.543,-70.404,-70.404) |