Coral calcifying fluid pH dictates response to ocean acidification ...

Ocean acidification driven by rising levels of CO2 impairs calcification, threatening coral reef growth. Predicting how corals respond to CO2 requires a better understanding of how calcification is controlled. Here we show how spatial variations in the pH of the internal calcifying fluid (pHcf) in c...

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Main Authors: Holcomb, Michael, Venn, Alexander A, Tambutté, Eric, Tambutté, Sylvie, Allemand, Denis, Trotter, Julie, McCulloch, Malcolm T
Format: Dataset
Language:English
Published: PANGAEA 2014
Subjects:
pH
Online Access:https://dx.doi.org/10.1594/pangaea.843920
https://doi.pangaea.de/10.1594/PANGAEA.843920
id ftdatacite:10.1594/pangaea.843920
record_format openpolar
spelling ftdatacite:10.1594/pangaea.843920 2024-02-27T08:44:11+00:00 Coral calcifying fluid pH dictates response to ocean acidification ... Holcomb, Michael Venn, Alexander A Tambutté, Eric Tambutté, Sylvie Allemand, Denis Trotter, Julie McCulloch, Malcolm T 2014 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.843920 https://doi.pangaea.de/10.1594/PANGAEA.843920 en eng PANGAEA https://cran.r-project.org/package=seacarb https://dx.doi.org/10.1038/srep05207 https://cran.r-project.org/package=seacarb Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 Acid-base regulation Animalia Benthic animals Benthos Calcification/Dissolution Cnidaria Coast and continental shelf Containers and aquaria 20-1000 L or < 1 m**2 Growth/Morphology Laboratory experiment Single species South Pacific Stylophora pistillata Temperate Species Figure pH pH, standard deviation Growth, relative Growth, relative, standard deviation Calcifying fluid, pH Calcifying fluid, pH, standard deviation Difference Difference, standard deviation Identification Incubation duration Group δ11B δ11B, standard error Alkalinity, total Alkalinity, total, standard deviation Salinity Temperature, water Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbonate ion Carbon, inorganic, dissolved Aragonite saturation state Calcite saturation state Potentiometric Potentiometric titration Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC dataset Supplementary Dataset Dataset 2014 ftdatacite https://doi.org/10.1594/pangaea.84392010.1038/srep05207 2024-02-01T15:26:49Z Ocean acidification driven by rising levels of CO2 impairs calcification, threatening coral reef growth. Predicting how corals respond to CO2 requires a better understanding of how calcification is controlled. Here we show how spatial variations in the pH of the internal calcifying fluid (pHcf) in coral (Stylophora pistillata) colonies correlates with differential sensitivity of calcification to acidification. Coral apexes had the highest pHcf and experienced the smallest changes in pHcf in response to acidification. Lateral growth was associated with lower pHcf and greater changes with acidification. Calcification showed a pattern similar to pHcf, with lateral growth being more strongly affected by acidification than apical. Regulation of pHcf is therefore spatially variable within a coral and critical to determining the sensitivity of calcification to ocean acidification. ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2015) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). ... Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology) Pacific
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Acid-base regulation
Animalia
Benthic animals
Benthos
Calcification/Dissolution
Cnidaria
Coast and continental shelf
Containers and aquaria 20-1000 L or < 1 m**2
Growth/Morphology
Laboratory experiment
Single species
South Pacific
Stylophora pistillata
Temperate
Species
Figure
pH
pH, standard deviation
Growth, relative
Growth, relative, standard deviation
Calcifying fluid, pH
Calcifying fluid, pH, standard deviation
Difference
Difference, standard deviation
Identification
Incubation duration
Group
δ11B
δ11B, standard error
Alkalinity, total
Alkalinity, total, standard deviation
Salinity
Temperature, water
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Carbon, inorganic, dissolved
Aragonite saturation state
Calcite saturation state
Potentiometric
Potentiometric titration
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
spellingShingle Acid-base regulation
Animalia
Benthic animals
Benthos
Calcification/Dissolution
Cnidaria
Coast and continental shelf
Containers and aquaria 20-1000 L or < 1 m**2
Growth/Morphology
Laboratory experiment
Single species
South Pacific
Stylophora pistillata
Temperate
Species
Figure
pH
pH, standard deviation
Growth, relative
Growth, relative, standard deviation
Calcifying fluid, pH
Calcifying fluid, pH, standard deviation
Difference
Difference, standard deviation
Identification
Incubation duration
Group
δ11B
δ11B, standard error
Alkalinity, total
Alkalinity, total, standard deviation
Salinity
Temperature, water
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Carbon, inorganic, dissolved
Aragonite saturation state
Calcite saturation state
Potentiometric
Potentiometric titration
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
Holcomb, Michael
Venn, Alexander A
Tambutté, Eric
Tambutté, Sylvie
Allemand, Denis
Trotter, Julie
McCulloch, Malcolm T
Coral calcifying fluid pH dictates response to ocean acidification ...
topic_facet Acid-base regulation
Animalia
Benthic animals
Benthos
Calcification/Dissolution
Cnidaria
Coast and continental shelf
Containers and aquaria 20-1000 L or < 1 m**2
Growth/Morphology
Laboratory experiment
Single species
South Pacific
Stylophora pistillata
Temperate
Species
Figure
pH
pH, standard deviation
Growth, relative
Growth, relative, standard deviation
Calcifying fluid, pH
Calcifying fluid, pH, standard deviation
Difference
Difference, standard deviation
Identification
Incubation duration
Group
δ11B
δ11B, standard error
Alkalinity, total
Alkalinity, total, standard deviation
Salinity
Temperature, water
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Carbon, inorganic, dissolved
Aragonite saturation state
Calcite saturation state
Potentiometric
Potentiometric titration
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
description Ocean acidification driven by rising levels of CO2 impairs calcification, threatening coral reef growth. Predicting how corals respond to CO2 requires a better understanding of how calcification is controlled. Here we show how spatial variations in the pH of the internal calcifying fluid (pHcf) in coral (Stylophora pistillata) colonies correlates with differential sensitivity of calcification to acidification. Coral apexes had the highest pHcf and experienced the smallest changes in pHcf in response to acidification. Lateral growth was associated with lower pHcf and greater changes with acidification. Calcification showed a pattern similar to pHcf, with lateral growth being more strongly affected by acidification than apical. Regulation of pHcf is therefore spatially variable within a coral and critical to determining the sensitivity of calcification to ocean acidification. ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2015) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). ...
format Dataset
author Holcomb, Michael
Venn, Alexander A
Tambutté, Eric
Tambutté, Sylvie
Allemand, Denis
Trotter, Julie
McCulloch, Malcolm T
author_facet Holcomb, Michael
Venn, Alexander A
Tambutté, Eric
Tambutté, Sylvie
Allemand, Denis
Trotter, Julie
McCulloch, Malcolm T
author_sort Holcomb, Michael
title Coral calcifying fluid pH dictates response to ocean acidification ...
title_short Coral calcifying fluid pH dictates response to ocean acidification ...
title_full Coral calcifying fluid pH dictates response to ocean acidification ...
title_fullStr Coral calcifying fluid pH dictates response to ocean acidification ...
title_full_unstemmed Coral calcifying fluid pH dictates response to ocean acidification ...
title_sort coral calcifying fluid ph dictates response to ocean acidification ...
publisher PANGAEA
publishDate 2014
url https://dx.doi.org/10.1594/pangaea.843920
https://doi.pangaea.de/10.1594/PANGAEA.843920
geographic Pacific
geographic_facet Pacific
genre Ocean acidification
genre_facet Ocean acidification
op_relation https://cran.r-project.org/package=seacarb
https://dx.doi.org/10.1038/srep05207
https://cran.r-project.org/package=seacarb
op_rights Creative Commons Attribution 3.0 Unported
https://creativecommons.org/licenses/by/3.0/legalcode
cc-by-3.0
op_doi https://doi.org/10.1594/pangaea.84392010.1038/srep05207
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