Strong shift from HCO3- to CO2 uptake in Emiliania huxleyi with acidification: new approach unravels acclimation versus short-term pH effects, supplement to: Kottmeier, Dorothee; Rokitta, Sebastian D; Tortell, Philippe Daniel; Rost, Bjoern (2014): Strong shift from HCO3- to CO2 uptake in Emiliania huxleyi with acidification: new approach unravels acclimation versus short-term pH effects. Photosynthesis Research, 121(2-3), 265-275

Effects of ocean acidification on Emiliania huxleyi strain RCC 1216 (calcifying, diploid life-cycle stage) and RCC 1217 (non-calcifying, haploid life-cycle stage) were investigated by measuring growth, elemental composition, and production rates under different pCO2 levels (380 and 950 µatm). In the...

Full description

Bibliographic Details
Main Authors: Kottmeier, Dorothee, Rokitta, Sebastian D, Tortell, Philippe Daniel, Rost, Bjoern
Format: Dataset
Language:English
Published: PANGAEA - Data Publisher for Earth & Environmental Science 2014
Subjects:
pH
Online Access:https://dx.doi.org/10.1594/pangaea.836912
https://doi.pangaea.de/10.1594/PANGAEA.836912
id ftdatacite:10.1594/pangaea.836912
record_format openpolar
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria <20 L
Chromista
Emiliania huxleyi
Growth/Morphology
Haptophyta
Laboratory experiment
Laboratory strains
North Atlantic
Other metabolic rates
Pelagos
Phytoplankton
Single species
Species
Strain
Treatment
Salinity
Temperature, water
Phosphate
Silicate
Pressure, water
Irradiance
pH
Alkalinity, total
Carbon, inorganic, dissolved
Growth rate
Carbon, organic, particulate, per cell
Total particulate carbon per cell
Nitrogen, organic, particulate, per cell
Chlorophyll a per cell
LightDark cycle
Carbon dioxide usage fraction
Carbonate system computation flag
Carbon dioxide
Partial pressure of carbon dioxide water at sea surface temperature wet air
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Aragonite saturation state
Calcite saturation state
Potentiometric
Potentiometric titration
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
spellingShingle Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria <20 L
Chromista
Emiliania huxleyi
Growth/Morphology
Haptophyta
Laboratory experiment
Laboratory strains
North Atlantic
Other metabolic rates
Pelagos
Phytoplankton
Single species
Species
Strain
Treatment
Salinity
Temperature, water
Phosphate
Silicate
Pressure, water
Irradiance
pH
Alkalinity, total
Carbon, inorganic, dissolved
Growth rate
Carbon, organic, particulate, per cell
Total particulate carbon per cell
Nitrogen, organic, particulate, per cell
Chlorophyll a per cell
LightDark cycle
Carbon dioxide usage fraction
Carbonate system computation flag
Carbon dioxide
Partial pressure of carbon dioxide water at sea surface temperature wet air
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Aragonite saturation state
Calcite saturation state
Potentiometric
Potentiometric titration
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
Kottmeier, Dorothee
Rokitta, Sebastian D
Tortell, Philippe Daniel
Rost, Bjoern
Strong shift from HCO3- to CO2 uptake in Emiliania huxleyi with acidification: new approach unravels acclimation versus short-term pH effects, supplement to: Kottmeier, Dorothee; Rokitta, Sebastian D; Tortell, Philippe Daniel; Rost, Bjoern (2014): Strong shift from HCO3- to CO2 uptake in Emiliania huxleyi with acidification: new approach unravels acclimation versus short-term pH effects. Photosynthesis Research, 121(2-3), 265-275
topic_facet Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria <20 L
Chromista
Emiliania huxleyi
Growth/Morphology
Haptophyta
Laboratory experiment
Laboratory strains
North Atlantic
Other metabolic rates
Pelagos
Phytoplankton
Single species
Species
Strain
Treatment
Salinity
Temperature, water
Phosphate
Silicate
Pressure, water
Irradiance
pH
Alkalinity, total
Carbon, inorganic, dissolved
Growth rate
Carbon, organic, particulate, per cell
Total particulate carbon per cell
Nitrogen, organic, particulate, per cell
Chlorophyll a per cell
LightDark cycle
Carbon dioxide usage fraction
Carbonate system computation flag
Carbon dioxide
Partial pressure of carbon dioxide water at sea surface temperature wet air
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Aragonite saturation state
Calcite saturation state
Potentiometric
Potentiometric titration
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
description Effects of ocean acidification on Emiliania huxleyi strain RCC 1216 (calcifying, diploid life-cycle stage) and RCC 1217 (non-calcifying, haploid life-cycle stage) were investigated by measuring growth, elemental composition, and production rates under different pCO2 levels (380 and 950 µatm). In these differently acclimated cells, the photosynthetic carbon source was assessed by a (14)C disequilibrium assay, conducted over a range of ecologically relevant pH values (7.9-8.7). In agreement with previous studies, we observed decreased calcification and stimulated biomass production in diploid cells under high pCO2, but no CO2-dependent changes in biomass production for haploid cells. In both life-cycle stages, the relative contributions of CO2 and HCO3 (-) uptake depended strongly on the assay pH. At pH values =< 8.1, cells preferentially used CO2 (>= 90 % CO2), whereas at pH values >= 8.3, cells progressively increased the fraction of HCO3 (-) uptake (~45 % CO2 at pH 8.7 in diploid cells; ~55 % CO2 at pH 8.5 in haploid cells). In contrast to the short-term effect of the assay pH, the pCO2 acclimation history had no significant effect on the carbon uptake behavior. A numerical sensitivity study confirmed that the pH-modification in the (14)C disequilibrium method yields reliable results, provided that model parameters (e.g., pH, temperature) are kept within typical measurement uncertainties. Our results demonstrate a high plasticity of E. huxleyi to rapidly adjust carbon acquisition to the external carbon supply and/or pH, and provide an explanation for the paradoxical observation of high CO2 sensitivity despite the apparently high HCO3 (-) usage seen in previous studies. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne et al, 2014) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2014-09-30.
format Dataset
author Kottmeier, Dorothee
Rokitta, Sebastian D
Tortell, Philippe Daniel
Rost, Bjoern
author_facet Kottmeier, Dorothee
Rokitta, Sebastian D
Tortell, Philippe Daniel
Rost, Bjoern
author_sort Kottmeier, Dorothee
title Strong shift from HCO3- to CO2 uptake in Emiliania huxleyi with acidification: new approach unravels acclimation versus short-term pH effects, supplement to: Kottmeier, Dorothee; Rokitta, Sebastian D; Tortell, Philippe Daniel; Rost, Bjoern (2014): Strong shift from HCO3- to CO2 uptake in Emiliania huxleyi with acidification: new approach unravels acclimation versus short-term pH effects. Photosynthesis Research, 121(2-3), 265-275
title_short Strong shift from HCO3- to CO2 uptake in Emiliania huxleyi with acidification: new approach unravels acclimation versus short-term pH effects, supplement to: Kottmeier, Dorothee; Rokitta, Sebastian D; Tortell, Philippe Daniel; Rost, Bjoern (2014): Strong shift from HCO3- to CO2 uptake in Emiliania huxleyi with acidification: new approach unravels acclimation versus short-term pH effects. Photosynthesis Research, 121(2-3), 265-275
title_full Strong shift from HCO3- to CO2 uptake in Emiliania huxleyi with acidification: new approach unravels acclimation versus short-term pH effects, supplement to: Kottmeier, Dorothee; Rokitta, Sebastian D; Tortell, Philippe Daniel; Rost, Bjoern (2014): Strong shift from HCO3- to CO2 uptake in Emiliania huxleyi with acidification: new approach unravels acclimation versus short-term pH effects. Photosynthesis Research, 121(2-3), 265-275
title_fullStr Strong shift from HCO3- to CO2 uptake in Emiliania huxleyi with acidification: new approach unravels acclimation versus short-term pH effects, supplement to: Kottmeier, Dorothee; Rokitta, Sebastian D; Tortell, Philippe Daniel; Rost, Bjoern (2014): Strong shift from HCO3- to CO2 uptake in Emiliania huxleyi with acidification: new approach unravels acclimation versus short-term pH effects. Photosynthesis Research, 121(2-3), 265-275
title_full_unstemmed Strong shift from HCO3- to CO2 uptake in Emiliania huxleyi with acidification: new approach unravels acclimation versus short-term pH effects, supplement to: Kottmeier, Dorothee; Rokitta, Sebastian D; Tortell, Philippe Daniel; Rost, Bjoern (2014): Strong shift from HCO3- to CO2 uptake in Emiliania huxleyi with acidification: new approach unravels acclimation versus short-term pH effects. Photosynthesis Research, 121(2-3), 265-275
title_sort strong shift from hco3- to co2 uptake in emiliania huxleyi with acidification: new approach unravels acclimation versus short-term ph effects, supplement to: kottmeier, dorothee; rokitta, sebastian d; tortell, philippe daniel; rost, bjoern (2014): strong shift from hco3- to co2 uptake in emiliania huxleyi with acidification: new approach unravels acclimation versus short-term ph effects. photosynthesis research, 121(2-3), 265-275
publisher PANGAEA - Data Publisher for Earth & Environmental Science
publishDate 2014
url https://dx.doi.org/10.1594/pangaea.836912
https://doi.pangaea.de/10.1594/PANGAEA.836912
genre North Atlantic
Ocean acidification
genre_facet North Atlantic
Ocean acidification
op_relation https://cran.r-project.org/package=seacarb
https://dx.doi.org/10.1007/s11120-014-9984-9
https://cran.r-project.org/package=seacarb
op_rights Creative Commons Attribution 3.0 Unported
https://creativecommons.org/licenses/by/3.0/legalcode
cc-by-3.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.1594/pangaea.836912
https://doi.org/10.1007/s11120-014-9984-9
_version_ 1766137279622938624
spelling ftdatacite:10.1594/pangaea.836912 2023-05-15T17:37:22+02:00 Strong shift from HCO3- to CO2 uptake in Emiliania huxleyi with acidification: new approach unravels acclimation versus short-term pH effects, supplement to: Kottmeier, Dorothee; Rokitta, Sebastian D; Tortell, Philippe Daniel; Rost, Bjoern (2014): Strong shift from HCO3- to CO2 uptake in Emiliania huxleyi with acidification: new approach unravels acclimation versus short-term pH effects. Photosynthesis Research, 121(2-3), 265-275 Kottmeier, Dorothee Rokitta, Sebastian D Tortell, Philippe Daniel Rost, Bjoern 2014 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.836912 https://doi.pangaea.de/10.1594/PANGAEA.836912 en eng PANGAEA - Data Publisher for Earth & Environmental Science https://cran.r-project.org/package=seacarb https://dx.doi.org/10.1007/s11120-014-9984-9 https://cran.r-project.org/package=seacarb Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 CC-BY Biomass/Abundance/Elemental composition Bottles or small containers/Aquaria <20 L Chromista Emiliania huxleyi Growth/Morphology Haptophyta Laboratory experiment Laboratory strains North Atlantic Other metabolic rates Pelagos Phytoplankton Single species Species Strain Treatment Salinity Temperature, water Phosphate Silicate Pressure, water Irradiance pH Alkalinity, total Carbon, inorganic, dissolved Growth rate Carbon, organic, particulate, per cell Total particulate carbon per cell Nitrogen, organic, particulate, per cell Chlorophyll a per cell LightDark cycle Carbon dioxide usage fraction Carbonate system computation flag Carbon dioxide Partial pressure of carbon dioxide water at sea surface temperature wet air Fugacity of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbonate ion Aragonite saturation state Calcite saturation state Potentiometric Potentiometric titration Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC Supplementary Dataset dataset Dataset 2014 ftdatacite https://doi.org/10.1594/pangaea.836912 https://doi.org/10.1007/s11120-014-9984-9 2022-02-08T16:27:35Z Effects of ocean acidification on Emiliania huxleyi strain RCC 1216 (calcifying, diploid life-cycle stage) and RCC 1217 (non-calcifying, haploid life-cycle stage) were investigated by measuring growth, elemental composition, and production rates under different pCO2 levels (380 and 950 µatm). In these differently acclimated cells, the photosynthetic carbon source was assessed by a (14)C disequilibrium assay, conducted over a range of ecologically relevant pH values (7.9-8.7). In agreement with previous studies, we observed decreased calcification and stimulated biomass production in diploid cells under high pCO2, but no CO2-dependent changes in biomass production for haploid cells. In both life-cycle stages, the relative contributions of CO2 and HCO3 (-) uptake depended strongly on the assay pH. At pH values =< 8.1, cells preferentially used CO2 (>= 90 % CO2), whereas at pH values >= 8.3, cells progressively increased the fraction of HCO3 (-) uptake (~45 % CO2 at pH 8.7 in diploid cells; ~55 % CO2 at pH 8.5 in haploid cells). In contrast to the short-term effect of the assay pH, the pCO2 acclimation history had no significant effect on the carbon uptake behavior. A numerical sensitivity study confirmed that the pH-modification in the (14)C disequilibrium method yields reliable results, provided that model parameters (e.g., pH, temperature) are kept within typical measurement uncertainties. Our results demonstrate a high plasticity of E. huxleyi to rapidly adjust carbon acquisition to the external carbon supply and/or pH, and provide an explanation for the paradoxical observation of high CO2 sensitivity despite the apparently high HCO3 (-) usage seen in previous studies. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne et al, 2014) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2014-09-30. Dataset North Atlantic Ocean acidification DataCite Metadata Store (German National Library of Science and Technology)