Acid-base physiology response to ocean acidification of two ecologically and economically important holothuroids from contrasting habitats, Holothuria scabra and Holothuria parva, supplement to: Collard, Marie; Eeckhaut, Igor; Dehairs, Frank; Dubois, Philippe (2014): Acid–base physiology response to ocean acidification of two ecologically and economically important holothuroids from contrasting habitats, Holothuria scabra and Holothuria parva. Environmental Science and Pollution Research, 21(23), 13602-13614

Sea cucumbers are dominant invertebrates in several ecosystems such as coral reefs, seagrass meadows and mangroves. As bioturbators, they have an important ecological role in making available calcium carbonate and nutrients to the rest of the community. However, due to their commercial value, they f...

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Bibliographic Details
Main Authors: Collard, Marie, Eeckhaut, Igor, Dehairs, Frank, Dubois, Philippe
Format: Dataset
Language:English
Published: PANGAEA - Data Publisher for Earth & Environmental Science 2014
Subjects:
pH
Online Access:https://dx.doi.org/10.1594/pangaea.835969
https://doi.pangaea.de/10.1594/PANGAEA.835969
id ftdatacite:10.1594/pangaea.835969
record_format openpolar
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Acid-base regulation
Animalia
Benthic animals
Benthos
Coast and continental shelf
Containers and aquaria 20-1000 L or < 1 m**2
Echinodermata
Holothuria parva
Holothuria scabra
Indian Ocean
Laboratory experiment
Other metabolic rates
Respiration
Single species
Tropical
Species
pH
Aquarium number
Duration, number of days
Coelomic fluid, pH
Difference
Coelomic fluid, alkalinity
Alkalinity, total
Coelomic fluid, carbon, inorganic, dissolved
Carbon, inorganic, dissolved
δ13C, Coelomic fluid
δ13C
Respiration rate, oxygen
Ammonium, excretion
Temperature, water
Salinity
Partial pressure of carbon dioxide water at sea surface temperature wet air
Carbon dioxide
Bicarbonate ion
Carbonate ion
Calcite saturation state
Aragonite saturation state
Carbonate system computation flag
Fugacity of carbon dioxide water at sea surface temperature wet air
Potentiometric
Calculated
Potentiometric titration
Isotope ratio mass spectrometry
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
spellingShingle Acid-base regulation
Animalia
Benthic animals
Benthos
Coast and continental shelf
Containers and aquaria 20-1000 L or < 1 m**2
Echinodermata
Holothuria parva
Holothuria scabra
Indian Ocean
Laboratory experiment
Other metabolic rates
Respiration
Single species
Tropical
Species
pH
Aquarium number
Duration, number of days
Coelomic fluid, pH
Difference
Coelomic fluid, alkalinity
Alkalinity, total
Coelomic fluid, carbon, inorganic, dissolved
Carbon, inorganic, dissolved
δ13C, Coelomic fluid
δ13C
Respiration rate, oxygen
Ammonium, excretion
Temperature, water
Salinity
Partial pressure of carbon dioxide water at sea surface temperature wet air
Carbon dioxide
Bicarbonate ion
Carbonate ion
Calcite saturation state
Aragonite saturation state
Carbonate system computation flag
Fugacity of carbon dioxide water at sea surface temperature wet air
Potentiometric
Calculated
Potentiometric titration
Isotope ratio mass spectrometry
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
Collard, Marie
Eeckhaut, Igor
Dehairs, Frank
Dubois, Philippe
Acid-base physiology response to ocean acidification of two ecologically and economically important holothuroids from contrasting habitats, Holothuria scabra and Holothuria parva, supplement to: Collard, Marie; Eeckhaut, Igor; Dehairs, Frank; Dubois, Philippe (2014): Acid–base physiology response to ocean acidification of two ecologically and economically important holothuroids from contrasting habitats, Holothuria scabra and Holothuria parva. Environmental Science and Pollution Research, 21(23), 13602-13614
topic_facet Acid-base regulation
Animalia
Benthic animals
Benthos
Coast and continental shelf
Containers and aquaria 20-1000 L or < 1 m**2
Echinodermata
Holothuria parva
Holothuria scabra
Indian Ocean
Laboratory experiment
Other metabolic rates
Respiration
Single species
Tropical
Species
pH
Aquarium number
Duration, number of days
Coelomic fluid, pH
Difference
Coelomic fluid, alkalinity
Alkalinity, total
Coelomic fluid, carbon, inorganic, dissolved
Carbon, inorganic, dissolved
δ13C, Coelomic fluid
δ13C
Respiration rate, oxygen
Ammonium, excretion
Temperature, water
Salinity
Partial pressure of carbon dioxide water at sea surface temperature wet air
Carbon dioxide
Bicarbonate ion
Carbonate ion
Calcite saturation state
Aragonite saturation state
Carbonate system computation flag
Fugacity of carbon dioxide water at sea surface temperature wet air
Potentiometric
Calculated
Potentiometric titration
Isotope ratio mass spectrometry
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
description Sea cucumbers are dominant invertebrates in several ecosystems such as coral reefs, seagrass meadows and mangroves. As bioturbators, they have an important ecological role in making available calcium carbonate and nutrients to the rest of the community. However, due to their commercial value, they face overexploitation in the natural environment. On top of that, occurring ocean acidification could impact these organisms, considered sensitive as echinoderms are osmoconformers, high-magnesium calcite producers and have a low metabolism. As a first investigation of the impact of ocean acidification on sea cucumbers, we tested the impact of short-term (6 to 12 days) exposure to ocean acidification (seawater pH 7.7 and 7.4) on two sea cucumbers collected in SW Madagascar, Holothuria scabra, a high commercial value species living in the seagrass meadows, and H. parva, inhabiting the mangroves. The former lives in a habitat with moderate fluctuations of seawater chemistry (driven by day-night differences) while the second lives in a highly variable intertidal environment. In both species, pH of the coelomic fluid was significantly negatively affected by reduced seawater pH, with a pronounced extracellular acidosis in individuals maintained at pH 7.7 and 7.4. This acidosis was due to an increased dissolved inorganic carbon content and pCO2 of the coelomic fluid, indicating a limited diffusion of the CO2 towards the external medium. However, respiration and ammonium excretion rates were not affected. No evidence of accumulation of bicarbonate was observed to buffer the coelomic fluid pH. If this acidosis stays uncompensated for when facing long-term exposure, other processes could be affected in both species, eventually leading to impacts on their ecological role. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne et al, 2014) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2014-09-15.
format Dataset
author Collard, Marie
Eeckhaut, Igor
Dehairs, Frank
Dubois, Philippe
author_facet Collard, Marie
Eeckhaut, Igor
Dehairs, Frank
Dubois, Philippe
author_sort Collard, Marie
title Acid-base physiology response to ocean acidification of two ecologically and economically important holothuroids from contrasting habitats, Holothuria scabra and Holothuria parva, supplement to: Collard, Marie; Eeckhaut, Igor; Dehairs, Frank; Dubois, Philippe (2014): Acid–base physiology response to ocean acidification of two ecologically and economically important holothuroids from contrasting habitats, Holothuria scabra and Holothuria parva. Environmental Science and Pollution Research, 21(23), 13602-13614
title_short Acid-base physiology response to ocean acidification of two ecologically and economically important holothuroids from contrasting habitats, Holothuria scabra and Holothuria parva, supplement to: Collard, Marie; Eeckhaut, Igor; Dehairs, Frank; Dubois, Philippe (2014): Acid–base physiology response to ocean acidification of two ecologically and economically important holothuroids from contrasting habitats, Holothuria scabra and Holothuria parva. Environmental Science and Pollution Research, 21(23), 13602-13614
title_full Acid-base physiology response to ocean acidification of two ecologically and economically important holothuroids from contrasting habitats, Holothuria scabra and Holothuria parva, supplement to: Collard, Marie; Eeckhaut, Igor; Dehairs, Frank; Dubois, Philippe (2014): Acid–base physiology response to ocean acidification of two ecologically and economically important holothuroids from contrasting habitats, Holothuria scabra and Holothuria parva. Environmental Science and Pollution Research, 21(23), 13602-13614
title_fullStr Acid-base physiology response to ocean acidification of two ecologically and economically important holothuroids from contrasting habitats, Holothuria scabra and Holothuria parva, supplement to: Collard, Marie; Eeckhaut, Igor; Dehairs, Frank; Dubois, Philippe (2014): Acid–base physiology response to ocean acidification of two ecologically and economically important holothuroids from contrasting habitats, Holothuria scabra and Holothuria parva. Environmental Science and Pollution Research, 21(23), 13602-13614
title_full_unstemmed Acid-base physiology response to ocean acidification of two ecologically and economically important holothuroids from contrasting habitats, Holothuria scabra and Holothuria parva, supplement to: Collard, Marie; Eeckhaut, Igor; Dehairs, Frank; Dubois, Philippe (2014): Acid–base physiology response to ocean acidification of two ecologically and economically important holothuroids from contrasting habitats, Holothuria scabra and Holothuria parva. Environmental Science and Pollution Research, 21(23), 13602-13614
title_sort acid-base physiology response to ocean acidification of two ecologically and economically important holothuroids from contrasting habitats, holothuria scabra and holothuria parva, supplement to: collard, marie; eeckhaut, igor; dehairs, frank; dubois, philippe (2014): acid–base physiology response to ocean acidification of two ecologically and economically important holothuroids from contrasting habitats, holothuria scabra and holothuria parva. environmental science and pollution research, 21(23), 13602-13614
publisher PANGAEA - Data Publisher for Earth & Environmental Science
publishDate 2014
url https://dx.doi.org/10.1594/pangaea.835969
https://doi.pangaea.de/10.1594/PANGAEA.835969
long_lat ENVELOPE(-67.166,-67.166,-66.266,-66.266)
ENVELOPE(31.117,31.117,-72.633,-72.633)
geographic Indian
DuBois
Collard
geographic_facet Indian
DuBois
Collard
genre Ocean acidification
genre_facet Ocean acidification
op_relation https://cran.r-project.org/package=seacarb
https://dx.doi.org/10.1007/s11356-014-3259-z
https://cran.r-project.org/package=seacarb
op_rights Creative Commons Attribution 3.0 Unported
https://creativecommons.org/licenses/by/3.0/legalcode
cc-by-3.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.1594/pangaea.835969
https://doi.org/10.1007/s11356-014-3259-z
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spelling ftdatacite:10.1594/pangaea.835969 2023-05-15T17:49:53+02:00 Acid-base physiology response to ocean acidification of two ecologically and economically important holothuroids from contrasting habitats, Holothuria scabra and Holothuria parva, supplement to: Collard, Marie; Eeckhaut, Igor; Dehairs, Frank; Dubois, Philippe (2014): Acid–base physiology response to ocean acidification of two ecologically and economically important holothuroids from contrasting habitats, Holothuria scabra and Holothuria parva. Environmental Science and Pollution Research, 21(23), 13602-13614 Collard, Marie Eeckhaut, Igor Dehairs, Frank Dubois, Philippe 2014 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.835969 https://doi.pangaea.de/10.1594/PANGAEA.835969 en eng PANGAEA - Data Publisher for Earth & Environmental Science https://cran.r-project.org/package=seacarb https://dx.doi.org/10.1007/s11356-014-3259-z https://cran.r-project.org/package=seacarb Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 CC-BY Acid-base regulation Animalia Benthic animals Benthos Coast and continental shelf Containers and aquaria 20-1000 L or < 1 m**2 Echinodermata Holothuria parva Holothuria scabra Indian Ocean Laboratory experiment Other metabolic rates Respiration Single species Tropical Species pH Aquarium number Duration, number of days Coelomic fluid, pH Difference Coelomic fluid, alkalinity Alkalinity, total Coelomic fluid, carbon, inorganic, dissolved Carbon, inorganic, dissolved δ13C, Coelomic fluid δ13C Respiration rate, oxygen Ammonium, excretion Temperature, water Salinity Partial pressure of carbon dioxide water at sea surface temperature wet air Carbon dioxide Bicarbonate ion Carbonate ion Calcite saturation state Aragonite saturation state Carbonate system computation flag Fugacity of carbon dioxide water at sea surface temperature wet air Potentiometric Calculated Potentiometric titration Isotope ratio mass spectrometry Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC Supplementary Dataset dataset Dataset 2014 ftdatacite https://doi.org/10.1594/pangaea.835969 https://doi.org/10.1007/s11356-014-3259-z 2021-11-05T12:55:41Z Sea cucumbers are dominant invertebrates in several ecosystems such as coral reefs, seagrass meadows and mangroves. As bioturbators, they have an important ecological role in making available calcium carbonate and nutrients to the rest of the community. However, due to their commercial value, they face overexploitation in the natural environment. On top of that, occurring ocean acidification could impact these organisms, considered sensitive as echinoderms are osmoconformers, high-magnesium calcite producers and have a low metabolism. As a first investigation of the impact of ocean acidification on sea cucumbers, we tested the impact of short-term (6 to 12 days) exposure to ocean acidification (seawater pH 7.7 and 7.4) on two sea cucumbers collected in SW Madagascar, Holothuria scabra, a high commercial value species living in the seagrass meadows, and H. parva, inhabiting the mangroves. The former lives in a habitat with moderate fluctuations of seawater chemistry (driven by day-night differences) while the second lives in a highly variable intertidal environment. In both species, pH of the coelomic fluid was significantly negatively affected by reduced seawater pH, with a pronounced extracellular acidosis in individuals maintained at pH 7.7 and 7.4. This acidosis was due to an increased dissolved inorganic carbon content and pCO2 of the coelomic fluid, indicating a limited diffusion of the CO2 towards the external medium. However, respiration and ammonium excretion rates were not affected. No evidence of accumulation of bicarbonate was observed to buffer the coelomic fluid pH. If this acidosis stays uncompensated for when facing long-term exposure, other processes could be affected in both species, eventually leading to impacts on their ecological role. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne et al, 2014) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2014-09-15. Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology) Indian DuBois ENVELOPE(-67.166,-67.166,-66.266,-66.266) Collard ENVELOPE(31.117,31.117,-72.633,-72.633)