CO2 and vitamin B12 interactions determine bioactive trace metal requirements of a subarctic Pacific diatom

Phytoplankton growth can be limited by numerous inorganic nutrients and organic growth factors. Using the subarctic diatom Attheya sp. in culture studies, we examined how the availability of vitamin B(12) and carbon dioxide partial pressure (pCO(2)) influences growth rate, primary productivity, cell...

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Main Authors: King, Andrew L, Sañudo-Wilhelmy, Sergio A, Leblanc, Karine, Hutchins, David A, Fu, Feixue
Format: Dataset
Language:English
Published: PANGAEA - Data Publisher for Earth & Environmental Science 2011
Subjects:
pH
Online Access:https://dx.doi.org/10.1594/pangaea.835475
https://doi.pangaea.de/10.1594/PANGAEA.835475
id ftdatacite:10.1594/pangaea.835475
record_format openpolar
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Attheya sp.
Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria <20 L
Chromista
Growth/Morphology
Laboratory experiment
Laboratory strains
Micro-nutrients
North Pacific
Ochrophyta
Pelagos
Phytoplankton
Primary production/Photosynthesis
Single species
Species
Treatment
Partial pressure of carbon dioxide water at sea surface temperature wet air
Growth rate
Growth rate, standard deviation
Primary production
Primary production of carbon, standard deviation
Carbon/Phosphorus ratio
Carbon/Phosphorus ratio, standard deviation
Nitrogen/Phosphorus ratio
Nitrogen/Phosphorus ratio, standard deviation
Iron/Phosphorus ratio
Iron/Phosphorus ratio, standard deviation
Cobalt/Phosphorus ratio
Cobalt/Phosphorus ratio, standard deviation
Zinc/Phosphorus ratio
Zinc/Phosphorus ratio, standard deviation
Cadmium/Phosphorus ratio
Cadmium/Phosphorus ratio, standard deviation
Net use efficiency, Iron
Net use efficiency, Iron, standard deviation
Net use efficiency, Cobalt
Net use efficiency, Cobalt, standard deviation
Net use efficiency, Zinc
Net use efficiency, Zinc, standard deviation
Net use efficiency, Cadmium
Net use efficiency, Cadmium, standard deviation
Salinity
Temperature, water
pH
pH, standard deviation
Carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard deviation
Partial pressure of carbon dioxide, standard deviation
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Alkalinity, total
Aragonite saturation state
Calcite saturation state
Potentiometric
Coulometric titration
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
spellingShingle Attheya sp.
Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria <20 L
Chromista
Growth/Morphology
Laboratory experiment
Laboratory strains
Micro-nutrients
North Pacific
Ochrophyta
Pelagos
Phytoplankton
Primary production/Photosynthesis
Single species
Species
Treatment
Partial pressure of carbon dioxide water at sea surface temperature wet air
Growth rate
Growth rate, standard deviation
Primary production
Primary production of carbon, standard deviation
Carbon/Phosphorus ratio
Carbon/Phosphorus ratio, standard deviation
Nitrogen/Phosphorus ratio
Nitrogen/Phosphorus ratio, standard deviation
Iron/Phosphorus ratio
Iron/Phosphorus ratio, standard deviation
Cobalt/Phosphorus ratio
Cobalt/Phosphorus ratio, standard deviation
Zinc/Phosphorus ratio
Zinc/Phosphorus ratio, standard deviation
Cadmium/Phosphorus ratio
Cadmium/Phosphorus ratio, standard deviation
Net use efficiency, Iron
Net use efficiency, Iron, standard deviation
Net use efficiency, Cobalt
Net use efficiency, Cobalt, standard deviation
Net use efficiency, Zinc
Net use efficiency, Zinc, standard deviation
Net use efficiency, Cadmium
Net use efficiency, Cadmium, standard deviation
Salinity
Temperature, water
pH
pH, standard deviation
Carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard deviation
Partial pressure of carbon dioxide, standard deviation
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Alkalinity, total
Aragonite saturation state
Calcite saturation state
Potentiometric
Coulometric titration
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
King, Andrew L
Sañudo-Wilhelmy, Sergio A
Leblanc, Karine
Hutchins, David A
Fu, Feixue
CO2 and vitamin B12 interactions determine bioactive trace metal requirements of a subarctic Pacific diatom
topic_facet Attheya sp.
Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria <20 L
Chromista
Growth/Morphology
Laboratory experiment
Laboratory strains
Micro-nutrients
North Pacific
Ochrophyta
Pelagos
Phytoplankton
Primary production/Photosynthesis
Single species
Species
Treatment
Partial pressure of carbon dioxide water at sea surface temperature wet air
Growth rate
Growth rate, standard deviation
Primary production
Primary production of carbon, standard deviation
Carbon/Phosphorus ratio
Carbon/Phosphorus ratio, standard deviation
Nitrogen/Phosphorus ratio
Nitrogen/Phosphorus ratio, standard deviation
Iron/Phosphorus ratio
Iron/Phosphorus ratio, standard deviation
Cobalt/Phosphorus ratio
Cobalt/Phosphorus ratio, standard deviation
Zinc/Phosphorus ratio
Zinc/Phosphorus ratio, standard deviation
Cadmium/Phosphorus ratio
Cadmium/Phosphorus ratio, standard deviation
Net use efficiency, Iron
Net use efficiency, Iron, standard deviation
Net use efficiency, Cobalt
Net use efficiency, Cobalt, standard deviation
Net use efficiency, Zinc
Net use efficiency, Zinc, standard deviation
Net use efficiency, Cadmium
Net use efficiency, Cadmium, standard deviation
Salinity
Temperature, water
pH
pH, standard deviation
Carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard deviation
Partial pressure of carbon dioxide, standard deviation
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Alkalinity, total
Aragonite saturation state
Calcite saturation state
Potentiometric
Coulometric titration
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
description Phytoplankton growth can be limited by numerous inorganic nutrients and organic growth factors. Using the subarctic diatom Attheya sp. in culture studies, we examined how the availability of vitamin B(12) and carbon dioxide partial pressure (pCO(2)) influences growth rate, primary productivity, cellular iron (Fe), cobalt (Co), zinc (Zn) and cadmium (Cd) quotas, and the net use efficiencies (NUEs) of these bioactive trace metals (mol C fixed per mol cellular trace metal per day). Under B(12)-replete conditions, cells grown at high pCO(2) had lower Fe, Zn and Cd quotas, and used those trace metals more efficiently in comparison with cells grown at low pCO(2). At high pCO(2), B(12)-limited cells had ~50% lower specific growth and carbon fixation rates, and used Fe ~15-fold less efficiently, and Zn and Cd ~3-fold less efficiently, in comparison with B(12)-replete cells. The observed higher Fe, Zn and Cd NUE under high pCO(2)/B(12)-replete conditions are consistent with predicted downregulation of carbon-concentrating mechanisms. Co quotas of B(12)-replete cells were 5- to 14-fold higher in comparison with B(12)-limited cells, suggesting that >80% of cellular Co of B(12)-limited cells was likely from B(12). Our results demonstrate that CO(2) and vitamin B(12) interactively influence growth, carbon fixation, trace metal requirements and trace metal NUE of this diatom. This suggests the need to consider complex feedback interactions between multiple environmental factors for this biogeochemically critical group of phytoplankton in the last glacial maximum as well as the current and future changing ocean. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne et al, 2014) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2014-09-01.
format Dataset
author King, Andrew L
Sañudo-Wilhelmy, Sergio A
Leblanc, Karine
Hutchins, David A
Fu, Feixue
author_facet King, Andrew L
Sañudo-Wilhelmy, Sergio A
Leblanc, Karine
Hutchins, David A
Fu, Feixue
author_sort King, Andrew L
title CO2 and vitamin B12 interactions determine bioactive trace metal requirements of a subarctic Pacific diatom
title_short CO2 and vitamin B12 interactions determine bioactive trace metal requirements of a subarctic Pacific diatom
title_full CO2 and vitamin B12 interactions determine bioactive trace metal requirements of a subarctic Pacific diatom
title_fullStr CO2 and vitamin B12 interactions determine bioactive trace metal requirements of a subarctic Pacific diatom
title_full_unstemmed CO2 and vitamin B12 interactions determine bioactive trace metal requirements of a subarctic Pacific diatom
title_sort co2 and vitamin b12 interactions determine bioactive trace metal requirements of a subarctic pacific diatom
publisher PANGAEA - Data Publisher for Earth & Environmental Science
publishDate 2011
url https://dx.doi.org/10.1594/pangaea.835475
https://doi.pangaea.de/10.1594/PANGAEA.835475
geographic Pacific
geographic_facet Pacific
genre Ocean acidification
Subarctic
genre_facet Ocean acidification
Subarctic
op_relation http://www.bco-dmo.org/dataset/3770
https://cran.r-project.org/package=seacarb
https://dx.doi.org/10.1038/ismej.2010.211
http://www.bco-dmo.org/dataset/3770
https://cran.r-project.org/package=seacarb
op_rights Creative Commons Attribution 3.0 Unported
https://creativecommons.org/licenses/by/3.0/legalcode
cc-by-3.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.1594/pangaea.835475
https://doi.org/10.1038/ismej.2010.211
_version_ 1766158826800676864
spelling ftdatacite:10.1594/pangaea.835475 2023-05-15T17:51:37+02:00 CO2 and vitamin B12 interactions determine bioactive trace metal requirements of a subarctic Pacific diatom King, Andrew L Sañudo-Wilhelmy, Sergio A Leblanc, Karine Hutchins, David A Fu, Feixue 2011 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.835475 https://doi.pangaea.de/10.1594/PANGAEA.835475 en eng PANGAEA - Data Publisher for Earth & Environmental Science http://www.bco-dmo.org/dataset/3770 https://cran.r-project.org/package=seacarb https://dx.doi.org/10.1038/ismej.2010.211 http://www.bco-dmo.org/dataset/3770 https://cran.r-project.org/package=seacarb Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 CC-BY Attheya sp. Biomass/Abundance/Elemental composition Bottles or small containers/Aquaria <20 L Chromista Growth/Morphology Laboratory experiment Laboratory strains Micro-nutrients North Pacific Ochrophyta Pelagos Phytoplankton Primary production/Photosynthesis Single species Species Treatment Partial pressure of carbon dioxide water at sea surface temperature wet air Growth rate Growth rate, standard deviation Primary production Primary production of carbon, standard deviation Carbon/Phosphorus ratio Carbon/Phosphorus ratio, standard deviation Nitrogen/Phosphorus ratio Nitrogen/Phosphorus ratio, standard deviation Iron/Phosphorus ratio Iron/Phosphorus ratio, standard deviation Cobalt/Phosphorus ratio Cobalt/Phosphorus ratio, standard deviation Zinc/Phosphorus ratio Zinc/Phosphorus ratio, standard deviation Cadmium/Phosphorus ratio Cadmium/Phosphorus ratio, standard deviation Net use efficiency, Iron Net use efficiency, Iron, standard deviation Net use efficiency, Cobalt Net use efficiency, Cobalt, standard deviation Net use efficiency, Zinc Net use efficiency, Zinc, standard deviation Net use efficiency, Cadmium Net use efficiency, Cadmium, standard deviation Salinity Temperature, water pH pH, standard deviation Carbon, inorganic, dissolved Carbon, inorganic, dissolved, standard deviation Partial pressure of carbon dioxide, standard deviation Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbonate ion Alkalinity, total Aragonite saturation state Calcite saturation state Potentiometric Coulometric titration Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC dataset Dataset 2011 ftdatacite https://doi.org/10.1594/pangaea.835475 https://doi.org/10.1038/ismej.2010.211 2022-02-08T16:27:35Z Phytoplankton growth can be limited by numerous inorganic nutrients and organic growth factors. Using the subarctic diatom Attheya sp. in culture studies, we examined how the availability of vitamin B(12) and carbon dioxide partial pressure (pCO(2)) influences growth rate, primary productivity, cellular iron (Fe), cobalt (Co), zinc (Zn) and cadmium (Cd) quotas, and the net use efficiencies (NUEs) of these bioactive trace metals (mol C fixed per mol cellular trace metal per day). Under B(12)-replete conditions, cells grown at high pCO(2) had lower Fe, Zn and Cd quotas, and used those trace metals more efficiently in comparison with cells grown at low pCO(2). At high pCO(2), B(12)-limited cells had ~50% lower specific growth and carbon fixation rates, and used Fe ~15-fold less efficiently, and Zn and Cd ~3-fold less efficiently, in comparison with B(12)-replete cells. The observed higher Fe, Zn and Cd NUE under high pCO(2)/B(12)-replete conditions are consistent with predicted downregulation of carbon-concentrating mechanisms. Co quotas of B(12)-replete cells were 5- to 14-fold higher in comparison with B(12)-limited cells, suggesting that >80% of cellular Co of B(12)-limited cells was likely from B(12). Our results demonstrate that CO(2) and vitamin B(12) interactively influence growth, carbon fixation, trace metal requirements and trace metal NUE of this diatom. This suggests the need to consider complex feedback interactions between multiple environmental factors for this biogeochemically critical group of phytoplankton in the last glacial maximum as well as the current and future changing ocean. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne et al, 2014) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2014-09-01. Dataset Ocean acidification Subarctic DataCite Metadata Store (German National Library of Science and Technology) Pacific