Combined effects of different CO2 levels and N sources on the diazotrophic cyanobacterium Trichodesmium, supplement to: Eichner, Meri; Kranz, Sven A; Rost, Bjoern (2014): Combined effects of different CO2 levels and N sources on the diazotrophic cyanobacterium Trichodesmium. Physiologia Plantarum, 152(2), 316-330

To predict effects of climate change and possible feedbacks, it is crucial to understand the mechanisms behind CO2 responses of biogeochemically relevant phytoplankton species. Previous experiments on the abundant N2 fixers Trichodesmium demonstrated strong CO2 responses, which were attributed to an...

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Main Authors: Eichner, Meri, Kranz, Sven A, Rost, Bjoern
Format: Dataset
Language:English
Published: PANGAEA - Data Publisher for Earth & Environmental Science 2014
Subjects:
pH
Online Access:https://dx.doi.org/10.1594/pangaea.834556
https://doi.pangaea.de/10.1594/PANGAEA.834556
id ftdatacite:10.1594/pangaea.834556
record_format openpolar
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Bacteria
Bottles or small containers/Aquaria <20 L
Cyanobacteria
Growth/Morphology
Laboratory experiment
Laboratory strains
Macro-nutrients
Not applicable
Other metabolic rates
Pelagos
Phytoplankton
Primary production/Photosynthesis
Respiration
Single species
Trichodesmium erythraeum
Species
Figure
Treatment
Salinity
Temperature, water
Irradiance
pH
pH, standard deviation
Alkalinity, total
Alkalinity, total, standard deviation
Carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard deviation
Partial pressure of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide, standard deviation
Growth rate
Growth rate, standard deviation
Carbon, organic, particulate per chlorophyll a
Carbon, organic, particulate, standard deviation
Nitrogen, organic, particulate per chlorophyll a
Nitrogen, organic, particulate, standard deviation
Particulate organic carbon production, per chlorophyll a
Particulate organic carbon, production, standard deviation
Particulate organic nitrogen production, per chlorophyll a
Particulate organic nitrogen production, standard deviation
Carbon, organic, particulate/Nitrogen, organic, particulate ratio
Carbon, organic, particulate/Nitrogen, organic, particulate ratio, standard deviation
Identification
Time in hours
LightDark cycle
Nitrogen fixation rate per chlorophyll a
Time point, descriptive
Net oxygen evolution, per chlorophyll a
Net oxygen evolution, per chlorophyll a, standard deviation
Carbon, inorganic, dissolved, half saturation concentration
Carbon, inorganic, dissolved, half saturation concentration, standard deviation
Maximum photochemical quantum yield of photosystem II
Maximum photochemical quantum yield of photosystem II, standard deviation
Effective absorbance cross-section of photosystem II
Effective absorbance cross-section of photosystem II, standard deviation
Re-oxidation time of the Qa acceptor
Re-oxidation time of the Qa acceptor, standard deviation
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Aragonite saturation state
Calcite saturation state
Potentiometric
Potentiometric titration
Coulometric titration
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
spellingShingle Bacteria
Bottles or small containers/Aquaria <20 L
Cyanobacteria
Growth/Morphology
Laboratory experiment
Laboratory strains
Macro-nutrients
Not applicable
Other metabolic rates
Pelagos
Phytoplankton
Primary production/Photosynthesis
Respiration
Single species
Trichodesmium erythraeum
Species
Figure
Treatment
Salinity
Temperature, water
Irradiance
pH
pH, standard deviation
Alkalinity, total
Alkalinity, total, standard deviation
Carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard deviation
Partial pressure of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide, standard deviation
Growth rate
Growth rate, standard deviation
Carbon, organic, particulate per chlorophyll a
Carbon, organic, particulate, standard deviation
Nitrogen, organic, particulate per chlorophyll a
Nitrogen, organic, particulate, standard deviation
Particulate organic carbon production, per chlorophyll a
Particulate organic carbon, production, standard deviation
Particulate organic nitrogen production, per chlorophyll a
Particulate organic nitrogen production, standard deviation
Carbon, organic, particulate/Nitrogen, organic, particulate ratio
Carbon, organic, particulate/Nitrogen, organic, particulate ratio, standard deviation
Identification
Time in hours
LightDark cycle
Nitrogen fixation rate per chlorophyll a
Time point, descriptive
Net oxygen evolution, per chlorophyll a
Net oxygen evolution, per chlorophyll a, standard deviation
Carbon, inorganic, dissolved, half saturation concentration
Carbon, inorganic, dissolved, half saturation concentration, standard deviation
Maximum photochemical quantum yield of photosystem II
Maximum photochemical quantum yield of photosystem II, standard deviation
Effective absorbance cross-section of photosystem II
Effective absorbance cross-section of photosystem II, standard deviation
Re-oxidation time of the Qa acceptor
Re-oxidation time of the Qa acceptor, standard deviation
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Aragonite saturation state
Calcite saturation state
Potentiometric
Potentiometric titration
Coulometric titration
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
Eichner, Meri
Kranz, Sven A
Rost, Bjoern
Combined effects of different CO2 levels and N sources on the diazotrophic cyanobacterium Trichodesmium, supplement to: Eichner, Meri; Kranz, Sven A; Rost, Bjoern (2014): Combined effects of different CO2 levels and N sources on the diazotrophic cyanobacterium Trichodesmium. Physiologia Plantarum, 152(2), 316-330
topic_facet Bacteria
Bottles or small containers/Aquaria <20 L
Cyanobacteria
Growth/Morphology
Laboratory experiment
Laboratory strains
Macro-nutrients
Not applicable
Other metabolic rates
Pelagos
Phytoplankton
Primary production/Photosynthesis
Respiration
Single species
Trichodesmium erythraeum
Species
Figure
Treatment
Salinity
Temperature, water
Irradiance
pH
pH, standard deviation
Alkalinity, total
Alkalinity, total, standard deviation
Carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard deviation
Partial pressure of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide, standard deviation
Growth rate
Growth rate, standard deviation
Carbon, organic, particulate per chlorophyll a
Carbon, organic, particulate, standard deviation
Nitrogen, organic, particulate per chlorophyll a
Nitrogen, organic, particulate, standard deviation
Particulate organic carbon production, per chlorophyll a
Particulate organic carbon, production, standard deviation
Particulate organic nitrogen production, per chlorophyll a
Particulate organic nitrogen production, standard deviation
Carbon, organic, particulate/Nitrogen, organic, particulate ratio
Carbon, organic, particulate/Nitrogen, organic, particulate ratio, standard deviation
Identification
Time in hours
LightDark cycle
Nitrogen fixation rate per chlorophyll a
Time point, descriptive
Net oxygen evolution, per chlorophyll a
Net oxygen evolution, per chlorophyll a, standard deviation
Carbon, inorganic, dissolved, half saturation concentration
Carbon, inorganic, dissolved, half saturation concentration, standard deviation
Maximum photochemical quantum yield of photosystem II
Maximum photochemical quantum yield of photosystem II, standard deviation
Effective absorbance cross-section of photosystem II
Effective absorbance cross-section of photosystem II, standard deviation
Re-oxidation time of the Qa acceptor
Re-oxidation time of the Qa acceptor, standard deviation
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Aragonite saturation state
Calcite saturation state
Potentiometric
Potentiometric titration
Coulometric titration
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
description To predict effects of climate change and possible feedbacks, it is crucial to understand the mechanisms behind CO2 responses of biogeochemically relevant phytoplankton species. Previous experiments on the abundant N2 fixers Trichodesmium demonstrated strong CO2 responses, which were attributed to an energy reallocation between its carbon (C) and nitrogen (N) acquisition. Pursuing this hypothesis, we manipulated the cellular energy budget by growing Trichodesmium erythraeum IMS101 under different CO2 partial pressure (pCO2) levels (180, 380, 980 and 1400?µatm) and N sources (N2 and NO3-). Subsequently, biomass production and the main energy-generating processes (photosynthesis and respiration) and energy-consuming processes (N2 fixation and C acquisition) were measured. While oxygen fluxes and chlorophyll fluorescence indicated that energy generation and its diurnal cycle was neither affected by pCO2 nor N source, cells differed in production rates and composition. Elevated pCO2 increased N2 fixation and organic C and N contents. The degree of stimulation was higher for nitrogenase activity than for cell contents, indicating a pCO2 effect on the transfer efficiency from N2 to biomass. pCO2-dependent changes in the diurnal cycle of N2 fixation correlated well with C affinities, confirming the interactions between N and C acquisition. Regarding effects of the N source, production rates were enhanced in NO3-grown cells, which we attribute to the higher N retention and lower ATP demand compared with N2 fixation. pCO2 effects on C affinity were less pronounced in NO3- users than N2 fixers. Our study illustrates the necessity to understand energy budgets and fluxes under different environmental conditions for explaining indirect effects of rising pCO2. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne et al, 2014) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2014-07-30.
format Dataset
author Eichner, Meri
Kranz, Sven A
Rost, Bjoern
author_facet Eichner, Meri
Kranz, Sven A
Rost, Bjoern
author_sort Eichner, Meri
title Combined effects of different CO2 levels and N sources on the diazotrophic cyanobacterium Trichodesmium, supplement to: Eichner, Meri; Kranz, Sven A; Rost, Bjoern (2014): Combined effects of different CO2 levels and N sources on the diazotrophic cyanobacterium Trichodesmium. Physiologia Plantarum, 152(2), 316-330
title_short Combined effects of different CO2 levels and N sources on the diazotrophic cyanobacterium Trichodesmium, supplement to: Eichner, Meri; Kranz, Sven A; Rost, Bjoern (2014): Combined effects of different CO2 levels and N sources on the diazotrophic cyanobacterium Trichodesmium. Physiologia Plantarum, 152(2), 316-330
title_full Combined effects of different CO2 levels and N sources on the diazotrophic cyanobacterium Trichodesmium, supplement to: Eichner, Meri; Kranz, Sven A; Rost, Bjoern (2014): Combined effects of different CO2 levels and N sources on the diazotrophic cyanobacterium Trichodesmium. Physiologia Plantarum, 152(2), 316-330
title_fullStr Combined effects of different CO2 levels and N sources on the diazotrophic cyanobacterium Trichodesmium, supplement to: Eichner, Meri; Kranz, Sven A; Rost, Bjoern (2014): Combined effects of different CO2 levels and N sources on the diazotrophic cyanobacterium Trichodesmium. Physiologia Plantarum, 152(2), 316-330
title_full_unstemmed Combined effects of different CO2 levels and N sources on the diazotrophic cyanobacterium Trichodesmium, supplement to: Eichner, Meri; Kranz, Sven A; Rost, Bjoern (2014): Combined effects of different CO2 levels and N sources on the diazotrophic cyanobacterium Trichodesmium. Physiologia Plantarum, 152(2), 316-330
title_sort combined effects of different co2 levels and n sources on the diazotrophic cyanobacterium trichodesmium, supplement to: eichner, meri; kranz, sven a; rost, bjoern (2014): combined effects of different co2 levels and n sources on the diazotrophic cyanobacterium trichodesmium. physiologia plantarum, 152(2), 316-330
publisher PANGAEA - Data Publisher for Earth & Environmental Science
publishDate 2014
url https://dx.doi.org/10.1594/pangaea.834556
https://doi.pangaea.de/10.1594/PANGAEA.834556
long_lat ENVELOPE(-60.200,-60.200,-63.733,-63.733)
geographic Sven
geographic_facet Sven
genre Ocean acidification
genre_facet Ocean acidification
op_relation https://cran.r-project.org/package=seacarb
https://dx.doi.org/10.1111/ppl.12172
https://cran.r-project.org/package=seacarb
op_rights Creative Commons Attribution 3.0 Unported
https://creativecommons.org/licenses/by/3.0/legalcode
cc-by-3.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.1594/pangaea.834556
https://doi.org/10.1111/ppl.12172
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spelling ftdatacite:10.1594/pangaea.834556 2023-05-15T17:51:53+02:00 Combined effects of different CO2 levels and N sources on the diazotrophic cyanobacterium Trichodesmium, supplement to: Eichner, Meri; Kranz, Sven A; Rost, Bjoern (2014): Combined effects of different CO2 levels and N sources on the diazotrophic cyanobacterium Trichodesmium. Physiologia Plantarum, 152(2), 316-330 Eichner, Meri Kranz, Sven A Rost, Bjoern 2014 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.834556 https://doi.pangaea.de/10.1594/PANGAEA.834556 en eng PANGAEA - Data Publisher for Earth & Environmental Science https://cran.r-project.org/package=seacarb https://dx.doi.org/10.1111/ppl.12172 https://cran.r-project.org/package=seacarb Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 CC-BY Bacteria Bottles or small containers/Aquaria <20 L Cyanobacteria Growth/Morphology Laboratory experiment Laboratory strains Macro-nutrients Not applicable Other metabolic rates Pelagos Phytoplankton Primary production/Photosynthesis Respiration Single species Trichodesmium erythraeum Species Figure Treatment Salinity Temperature, water Irradiance pH pH, standard deviation Alkalinity, total Alkalinity, total, standard deviation Carbon, inorganic, dissolved Carbon, inorganic, dissolved, standard deviation Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide, standard deviation Growth rate Growth rate, standard deviation Carbon, organic, particulate per chlorophyll a Carbon, organic, particulate, standard deviation Nitrogen, organic, particulate per chlorophyll a Nitrogen, organic, particulate, standard deviation Particulate organic carbon production, per chlorophyll a Particulate organic carbon, production, standard deviation Particulate organic nitrogen production, per chlorophyll a Particulate organic nitrogen production, standard deviation Carbon, organic, particulate/Nitrogen, organic, particulate ratio Carbon, organic, particulate/Nitrogen, organic, particulate ratio, standard deviation Identification Time in hours LightDark cycle Nitrogen fixation rate per chlorophyll a Time point, descriptive Net oxygen evolution, per chlorophyll a Net oxygen evolution, per chlorophyll a, standard deviation Carbon, inorganic, dissolved, half saturation concentration Carbon, inorganic, dissolved, half saturation concentration, standard deviation Maximum photochemical quantum yield of photosystem II Maximum photochemical quantum yield of photosystem II, standard deviation Effective absorbance cross-section of photosystem II Effective absorbance cross-section of photosystem II, standard deviation Re-oxidation time of the Qa acceptor Re-oxidation time of the Qa acceptor, standard deviation Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbonate ion Aragonite saturation state Calcite saturation state Potentiometric Potentiometric titration Coulometric titration Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC Supplementary Dataset dataset Dataset 2014 ftdatacite https://doi.org/10.1594/pangaea.834556 https://doi.org/10.1111/ppl.12172 2022-02-08T16:27:35Z To predict effects of climate change and possible feedbacks, it is crucial to understand the mechanisms behind CO2 responses of biogeochemically relevant phytoplankton species. Previous experiments on the abundant N2 fixers Trichodesmium demonstrated strong CO2 responses, which were attributed to an energy reallocation between its carbon (C) and nitrogen (N) acquisition. Pursuing this hypothesis, we manipulated the cellular energy budget by growing Trichodesmium erythraeum IMS101 under different CO2 partial pressure (pCO2) levels (180, 380, 980 and 1400?µatm) and N sources (N2 and NO3-). Subsequently, biomass production and the main energy-generating processes (photosynthesis and respiration) and energy-consuming processes (N2 fixation and C acquisition) were measured. While oxygen fluxes and chlorophyll fluorescence indicated that energy generation and its diurnal cycle was neither affected by pCO2 nor N source, cells differed in production rates and composition. Elevated pCO2 increased N2 fixation and organic C and N contents. The degree of stimulation was higher for nitrogenase activity than for cell contents, indicating a pCO2 effect on the transfer efficiency from N2 to biomass. pCO2-dependent changes in the diurnal cycle of N2 fixation correlated well with C affinities, confirming the interactions between N and C acquisition. Regarding effects of the N source, production rates were enhanced in NO3-grown cells, which we attribute to the higher N retention and lower ATP demand compared with N2 fixation. pCO2 effects on C affinity were less pronounced in NO3- users than N2 fixers. Our study illustrates the necessity to understand energy budgets and fluxes under different environmental conditions for explaining indirect effects of rising pCO2. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne et al, 2014) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2014-07-30. Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology) Sven ENVELOPE(-60.200,-60.200,-63.733,-63.733)