Acid-base regulation in the Dungeness crab (Metacarcinus magister), supplement to: Hans, Stephanie; Fehsenfeld, Sandra; Treberg, Jason R; Weihrauch, Dirk (2014): Acid–base regulation in the Dungeness crab (Metacarcinus magister). Marine Biology, 161(5), 1179-1193

Homeostatic regulation allows organisms to secure basic physiological processes in a varying environment. To counteract fluctuations in ambient carbonate system speciation due to elevated seawater pCO2 (hypercapnia), many aquatic crustaceans excrete/accumulate acid-base equivalents through their gil...

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Main Authors: Hans, Stephanie, Fehsenfeld, Sandra, Treberg, Jason R, Weihrauch, Dirk
Format: Dataset
Language:English
Published: PANGAEA - Data Publisher for Earth & Environmental Science 2014
Subjects:
pH
Online Access:https://dx.doi.org/10.1594/pangaea.833716
https://doi.pangaea.de/10.1594/PANGAEA.833716
id ftdatacite:10.1594/pangaea.833716
record_format openpolar
spelling ftdatacite:10.1594/pangaea.833716 2023-05-15T17:51:21+02:00 Acid-base regulation in the Dungeness crab (Metacarcinus magister), supplement to: Hans, Stephanie; Fehsenfeld, Sandra; Treberg, Jason R; Weihrauch, Dirk (2014): Acid–base regulation in the Dungeness crab (Metacarcinus magister). Marine Biology, 161(5), 1179-1193 Hans, Stephanie Fehsenfeld, Sandra Treberg, Jason R Weihrauch, Dirk 2014 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.833716 https://doi.pangaea.de/10.1594/PANGAEA.833716 en eng PANGAEA - Data Publisher for Earth & Environmental Science https://cran.r-project.org/package=seacarb https://dx.doi.org/10.1007/s00227-014-2409-7 https://cran.r-project.org/package=seacarb Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 CC-BY Acid-base regulation Animalia Arthropoda Benthic animals Benthos Coast and continental shelf Containers and aquaria 20-1000 L or < 1 m**2 Laboratory experiment Metacarcinus magister Not applicable Other metabolic rates Respiration Single species Temperate Species Figure Table Treatment Identification Haemolymph, pH Haemolymph, partial pressure of carbon dioxide Haemolymph, bicarbonate ion Ammonia excretion Time point, descriptive Respiration rate, oxygen Replicates pH Sample code/label Partial pressure of carbon dioxide water at sea surface temperature wet air Bicarbonate ion increase rate Hemocyanin Ammonia+Ammonium Sodium ion Potassium ion Calcium ion Magnesium ion Chloride ion Sulfate ion Osmolality Salinity Temperature, water Carbon, inorganic, dissolved Carbon, inorganic, dissolved, standard error Partial pressure of carbon dioxide water at sea surface temperature wet air, standard error Bicarbonate ion Bicarbonate ion, standard error Alkalinity, total Alkalinity, total, standard error pH, standard error Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Carbonate ion Aragonite saturation state Calcite saturation state Coulometric titration Calculated using CO2SYS Potentiometric Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC Supplementary Dataset dataset Dataset 2014 ftdatacite https://doi.org/10.1594/pangaea.833716 https://doi.org/10.1007/s00227-014-2409-7 2021-11-05T12:55:41Z Homeostatic regulation allows organisms to secure basic physiological processes in a varying environment. To counteract fluctuations in ambient carbonate system speciation due to elevated seawater pCO2 (hypercapnia), many aquatic crustaceans excrete/accumulate acid-base equivalents through their gills; however, not much is known about the role of ammonia in this response. The present study investigated the effects of hypercapnia on acid-base and ammonia regulation in the Dungeness crab, Metacarcinus magister on the whole animal and isolated gill levels. Hemolymph pCO2 and [HCO3]- increased in M. magister acclimated to elevated pCO2 (330 Pa), while pH remained stable. Additionally, hemolymph [Na+], [Ca2+], and [SO4]2- were significantly increased. When challenged with varying pH during gill perfusion, the pH of the artificial hemolymph remained relatively unchanged. Overall, ammonia production and excretion, as well as oxygen consumption, were reduced in crabs acclimated to elevated pCO2, demonstrating that either (amino acid) oxidation is reduced in response to this particular stress, or nitrogenous wastes are excreted in an alternative form. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne et al, 2014) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2014-07-01. Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology)
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Acid-base regulation
Animalia
Arthropoda
Benthic animals
Benthos
Coast and continental shelf
Containers and aquaria 20-1000 L or < 1 m**2
Laboratory experiment
Metacarcinus magister
Not applicable
Other metabolic rates
Respiration
Single species
Temperate
Species
Figure
Table
Treatment
Identification
Haemolymph, pH
Haemolymph, partial pressure of carbon dioxide
Haemolymph, bicarbonate ion
Ammonia excretion
Time point, descriptive
Respiration rate, oxygen
Replicates
pH
Sample code/label
Partial pressure of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion increase rate
Hemocyanin
Ammonia+Ammonium
Sodium ion
Potassium ion
Calcium ion
Magnesium ion
Chloride ion
Sulfate ion
Osmolality
Salinity
Temperature, water
Carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard error
Partial pressure of carbon dioxide water at sea surface temperature wet air, standard error
Bicarbonate ion
Bicarbonate ion, standard error
Alkalinity, total
Alkalinity, total, standard error
pH, standard error
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Carbonate ion
Aragonite saturation state
Calcite saturation state
Coulometric titration
Calculated using CO2SYS
Potentiometric
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
spellingShingle Acid-base regulation
Animalia
Arthropoda
Benthic animals
Benthos
Coast and continental shelf
Containers and aquaria 20-1000 L or < 1 m**2
Laboratory experiment
Metacarcinus magister
Not applicable
Other metabolic rates
Respiration
Single species
Temperate
Species
Figure
Table
Treatment
Identification
Haemolymph, pH
Haemolymph, partial pressure of carbon dioxide
Haemolymph, bicarbonate ion
Ammonia excretion
Time point, descriptive
Respiration rate, oxygen
Replicates
pH
Sample code/label
Partial pressure of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion increase rate
Hemocyanin
Ammonia+Ammonium
Sodium ion
Potassium ion
Calcium ion
Magnesium ion
Chloride ion
Sulfate ion
Osmolality
Salinity
Temperature, water
Carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard error
Partial pressure of carbon dioxide water at sea surface temperature wet air, standard error
Bicarbonate ion
Bicarbonate ion, standard error
Alkalinity, total
Alkalinity, total, standard error
pH, standard error
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Carbonate ion
Aragonite saturation state
Calcite saturation state
Coulometric titration
Calculated using CO2SYS
Potentiometric
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
Hans, Stephanie
Fehsenfeld, Sandra
Treberg, Jason R
Weihrauch, Dirk
Acid-base regulation in the Dungeness crab (Metacarcinus magister), supplement to: Hans, Stephanie; Fehsenfeld, Sandra; Treberg, Jason R; Weihrauch, Dirk (2014): Acid–base regulation in the Dungeness crab (Metacarcinus magister). Marine Biology, 161(5), 1179-1193
topic_facet Acid-base regulation
Animalia
Arthropoda
Benthic animals
Benthos
Coast and continental shelf
Containers and aquaria 20-1000 L or < 1 m**2
Laboratory experiment
Metacarcinus magister
Not applicable
Other metabolic rates
Respiration
Single species
Temperate
Species
Figure
Table
Treatment
Identification
Haemolymph, pH
Haemolymph, partial pressure of carbon dioxide
Haemolymph, bicarbonate ion
Ammonia excretion
Time point, descriptive
Respiration rate, oxygen
Replicates
pH
Sample code/label
Partial pressure of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion increase rate
Hemocyanin
Ammonia+Ammonium
Sodium ion
Potassium ion
Calcium ion
Magnesium ion
Chloride ion
Sulfate ion
Osmolality
Salinity
Temperature, water
Carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard error
Partial pressure of carbon dioxide water at sea surface temperature wet air, standard error
Bicarbonate ion
Bicarbonate ion, standard error
Alkalinity, total
Alkalinity, total, standard error
pH, standard error
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Carbonate ion
Aragonite saturation state
Calcite saturation state
Coulometric titration
Calculated using CO2SYS
Potentiometric
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
description Homeostatic regulation allows organisms to secure basic physiological processes in a varying environment. To counteract fluctuations in ambient carbonate system speciation due to elevated seawater pCO2 (hypercapnia), many aquatic crustaceans excrete/accumulate acid-base equivalents through their gills; however, not much is known about the role of ammonia in this response. The present study investigated the effects of hypercapnia on acid-base and ammonia regulation in the Dungeness crab, Metacarcinus magister on the whole animal and isolated gill levels. Hemolymph pCO2 and [HCO3]- increased in M. magister acclimated to elevated pCO2 (330 Pa), while pH remained stable. Additionally, hemolymph [Na+], [Ca2+], and [SO4]2- were significantly increased. When challenged with varying pH during gill perfusion, the pH of the artificial hemolymph remained relatively unchanged. Overall, ammonia production and excretion, as well as oxygen consumption, were reduced in crabs acclimated to elevated pCO2, demonstrating that either (amino acid) oxidation is reduced in response to this particular stress, or nitrogenous wastes are excreted in an alternative form. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne et al, 2014) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2014-07-01.
format Dataset
author Hans, Stephanie
Fehsenfeld, Sandra
Treberg, Jason R
Weihrauch, Dirk
author_facet Hans, Stephanie
Fehsenfeld, Sandra
Treberg, Jason R
Weihrauch, Dirk
author_sort Hans, Stephanie
title Acid-base regulation in the Dungeness crab (Metacarcinus magister), supplement to: Hans, Stephanie; Fehsenfeld, Sandra; Treberg, Jason R; Weihrauch, Dirk (2014): Acid–base regulation in the Dungeness crab (Metacarcinus magister). Marine Biology, 161(5), 1179-1193
title_short Acid-base regulation in the Dungeness crab (Metacarcinus magister), supplement to: Hans, Stephanie; Fehsenfeld, Sandra; Treberg, Jason R; Weihrauch, Dirk (2014): Acid–base regulation in the Dungeness crab (Metacarcinus magister). Marine Biology, 161(5), 1179-1193
title_full Acid-base regulation in the Dungeness crab (Metacarcinus magister), supplement to: Hans, Stephanie; Fehsenfeld, Sandra; Treberg, Jason R; Weihrauch, Dirk (2014): Acid–base regulation in the Dungeness crab (Metacarcinus magister). Marine Biology, 161(5), 1179-1193
title_fullStr Acid-base regulation in the Dungeness crab (Metacarcinus magister), supplement to: Hans, Stephanie; Fehsenfeld, Sandra; Treberg, Jason R; Weihrauch, Dirk (2014): Acid–base regulation in the Dungeness crab (Metacarcinus magister). Marine Biology, 161(5), 1179-1193
title_full_unstemmed Acid-base regulation in the Dungeness crab (Metacarcinus magister), supplement to: Hans, Stephanie; Fehsenfeld, Sandra; Treberg, Jason R; Weihrauch, Dirk (2014): Acid–base regulation in the Dungeness crab (Metacarcinus magister). Marine Biology, 161(5), 1179-1193
title_sort acid-base regulation in the dungeness crab (metacarcinus magister), supplement to: hans, stephanie; fehsenfeld, sandra; treberg, jason r; weihrauch, dirk (2014): acid–base regulation in the dungeness crab (metacarcinus magister). marine biology, 161(5), 1179-1193
publisher PANGAEA - Data Publisher for Earth & Environmental Science
publishDate 2014
url https://dx.doi.org/10.1594/pangaea.833716
https://doi.pangaea.de/10.1594/PANGAEA.833716
genre Ocean acidification
genre_facet Ocean acidification
op_relation https://cran.r-project.org/package=seacarb
https://dx.doi.org/10.1007/s00227-014-2409-7
https://cran.r-project.org/package=seacarb
op_rights Creative Commons Attribution 3.0 Unported
https://creativecommons.org/licenses/by/3.0/legalcode
cc-by-3.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.1594/pangaea.833716
https://doi.org/10.1007/s00227-014-2409-7
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