The O2, pH and Ca2+ Microenvironment of Benthic Foraminifera in a High CO2 World ...

Ocean acidification (OA) can have adverse effects on marine calcifiers. Yet, phototrophic marine calcifiers elevate their external oxygen and pH microenvironment in daylight, through the uptake of dissolved inorganic carbon (DIC) by photosynthesis. We studied to which extent pH elevation within thei...

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Main Authors: Glas, Martin S, Fabricius, Katharina Elisabeth, de Beer, Dirk, Uthicke, Sven, Gilbert, Jack Anthony
Format: Dataset
Language:English
Published: PANGAEA 2012
Subjects:
pH
Online Access:https://dx.doi.org/10.1594/pangaea.833612
https://doi.pangaea.de/10.1594/PANGAEA.833612
id ftdatacite:10.1594/pangaea.833612
record_format openpolar
spelling ftdatacite:10.1594/pangaea.833612 2024-04-28T08:34:48+00:00 The O2, pH and Ca2+ Microenvironment of Benthic Foraminifera in a High CO2 World ... Glas, Martin S Fabricius, Katharina Elisabeth de Beer, Dirk Uthicke, Sven Gilbert, Jack Anthony 2012 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.833612 https://doi.pangaea.de/10.1594/PANGAEA.833612 en eng PANGAEA https://cran.r-project.org/package=seacarb https://dx.doi.org/10.1371/journal.pone.0050010 https://cran.r-project.org/package=seacarb Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 Amphistegina radiata Benthos Bottles or small containers/Aquaria <20 L Chromista Coast and continental shelf Foraminifera Heterostegina depressa Heterotrophic prokaryotes Laboratory experiment Marginopora vertebralis Miliola sp. Peneroplis sp. Primary production/Photosynthesis Quinquelloculina sp. Single species South Pacific Tropical Figure Date Identification Treatment Time point, descriptive Species Group Individual code Size Position Irradiance Oxygen Slope Hydrogen ion concentration Hydrogen ion concentration, standard deviation Oxygen, standard deviation Slope, standard deviation Calcium ion Salinity Temperature, water Temperature, water, standard deviation Phosphate Phosphate, standard deviation Silicate Silicate, standard deviation pH pH, standard deviation Carbon, inorganic, dissolved Carbon, inorganic, dissolved, standard deviation Alkalinity, total Alkalinity, total, standard deviation Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide, standard deviation dataset Supplementary Dataset Dataset 2012 ftdatacite https://doi.org/10.1594/pangaea.83361210.1371/journal.pone.0050010 2024-04-02T10:43:08Z Ocean acidification (OA) can have adverse effects on marine calcifiers. Yet, phototrophic marine calcifiers elevate their external oxygen and pH microenvironment in daylight, through the uptake of dissolved inorganic carbon (DIC) by photosynthesis. We studied to which extent pH elevation within their microenvironments in daylight can counteract ambient seawater pH reductions, i.e. OA conditions. We measured the O2 and pH microenvironment of four photosymbiotic and two symbiont-free benthic tropical foraminiferal species at three different OA treatments (~432, 1141 and 2151 µatm pCO2). The O2 concentration difference between the seawater and the test surface (delta O2) was taken as a measure for the photosynthetic rate. Our results showed that O2 and pH levels were significantly higher on photosymbiotic foraminiferal surfaces in light than in dark conditions, and than on surfaces of symbiont-free foraminifera. Rates of photosynthesis at saturated light conditions did not change significantly between OA ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne et al, 2014) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2014-06-19. ... Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology)
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Amphistegina radiata
Benthos
Bottles or small containers/Aquaria <20 L
Chromista
Coast and continental shelf
Foraminifera
Heterostegina depressa
Heterotrophic prokaryotes
Laboratory experiment
Marginopora vertebralis
Miliola sp.
Peneroplis sp.
Primary production/Photosynthesis
Quinquelloculina sp.
Single species
South Pacific
Tropical
Figure
Date
Identification
Treatment
Time point, descriptive
Species
Group
Individual code
Size
Position
Irradiance
Oxygen
Slope
Hydrogen ion concentration
Hydrogen ion concentration, standard deviation
Oxygen, standard deviation
Slope, standard deviation
Calcium ion
Salinity
Temperature, water
Temperature, water, standard deviation
Phosphate
Phosphate, standard deviation
Silicate
Silicate, standard deviation
pH
pH, standard deviation
Carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard deviation
Alkalinity, total
Alkalinity, total, standard deviation
Partial pressure of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide, standard deviation
spellingShingle Amphistegina radiata
Benthos
Bottles or small containers/Aquaria <20 L
Chromista
Coast and continental shelf
Foraminifera
Heterostegina depressa
Heterotrophic prokaryotes
Laboratory experiment
Marginopora vertebralis
Miliola sp.
Peneroplis sp.
Primary production/Photosynthesis
Quinquelloculina sp.
Single species
South Pacific
Tropical
Figure
Date
Identification
Treatment
Time point, descriptive
Species
Group
Individual code
Size
Position
Irradiance
Oxygen
Slope
Hydrogen ion concentration
Hydrogen ion concentration, standard deviation
Oxygen, standard deviation
Slope, standard deviation
Calcium ion
Salinity
Temperature, water
Temperature, water, standard deviation
Phosphate
Phosphate, standard deviation
Silicate
Silicate, standard deviation
pH
pH, standard deviation
Carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard deviation
Alkalinity, total
Alkalinity, total, standard deviation
Partial pressure of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide, standard deviation
Glas, Martin S
Fabricius, Katharina Elisabeth
de Beer, Dirk
Uthicke, Sven
Gilbert, Jack Anthony
The O2, pH and Ca2+ Microenvironment of Benthic Foraminifera in a High CO2 World ...
topic_facet Amphistegina radiata
Benthos
Bottles or small containers/Aquaria <20 L
Chromista
Coast and continental shelf
Foraminifera
Heterostegina depressa
Heterotrophic prokaryotes
Laboratory experiment
Marginopora vertebralis
Miliola sp.
Peneroplis sp.
Primary production/Photosynthesis
Quinquelloculina sp.
Single species
South Pacific
Tropical
Figure
Date
Identification
Treatment
Time point, descriptive
Species
Group
Individual code
Size
Position
Irradiance
Oxygen
Slope
Hydrogen ion concentration
Hydrogen ion concentration, standard deviation
Oxygen, standard deviation
Slope, standard deviation
Calcium ion
Salinity
Temperature, water
Temperature, water, standard deviation
Phosphate
Phosphate, standard deviation
Silicate
Silicate, standard deviation
pH
pH, standard deviation
Carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard deviation
Alkalinity, total
Alkalinity, total, standard deviation
Partial pressure of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide, standard deviation
description Ocean acidification (OA) can have adverse effects on marine calcifiers. Yet, phototrophic marine calcifiers elevate their external oxygen and pH microenvironment in daylight, through the uptake of dissolved inorganic carbon (DIC) by photosynthesis. We studied to which extent pH elevation within their microenvironments in daylight can counteract ambient seawater pH reductions, i.e. OA conditions. We measured the O2 and pH microenvironment of four photosymbiotic and two symbiont-free benthic tropical foraminiferal species at three different OA treatments (~432, 1141 and 2151 µatm pCO2). The O2 concentration difference between the seawater and the test surface (delta O2) was taken as a measure for the photosynthetic rate. Our results showed that O2 and pH levels were significantly higher on photosymbiotic foraminiferal surfaces in light than in dark conditions, and than on surfaces of symbiont-free foraminifera. Rates of photosynthesis at saturated light conditions did not change significantly between OA ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne et al, 2014) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2014-06-19. ...
format Dataset
author Glas, Martin S
Fabricius, Katharina Elisabeth
de Beer, Dirk
Uthicke, Sven
Gilbert, Jack Anthony
author_facet Glas, Martin S
Fabricius, Katharina Elisabeth
de Beer, Dirk
Uthicke, Sven
Gilbert, Jack Anthony
author_sort Glas, Martin S
title The O2, pH and Ca2+ Microenvironment of Benthic Foraminifera in a High CO2 World ...
title_short The O2, pH and Ca2+ Microenvironment of Benthic Foraminifera in a High CO2 World ...
title_full The O2, pH and Ca2+ Microenvironment of Benthic Foraminifera in a High CO2 World ...
title_fullStr The O2, pH and Ca2+ Microenvironment of Benthic Foraminifera in a High CO2 World ...
title_full_unstemmed The O2, pH and Ca2+ Microenvironment of Benthic Foraminifera in a High CO2 World ...
title_sort o2, ph and ca2+ microenvironment of benthic foraminifera in a high co2 world ...
publisher PANGAEA
publishDate 2012
url https://dx.doi.org/10.1594/pangaea.833612
https://doi.pangaea.de/10.1594/PANGAEA.833612
genre Ocean acidification
genre_facet Ocean acidification
op_relation https://cran.r-project.org/package=seacarb
https://dx.doi.org/10.1371/journal.pone.0050010
https://cran.r-project.org/package=seacarb
op_rights Creative Commons Attribution 3.0 Unported
https://creativecommons.org/licenses/by/3.0/legalcode
cc-by-3.0
op_doi https://doi.org/10.1594/pangaea.83361210.1371/journal.pone.0050010
_version_ 1797591352172609536