Enhancement of photosynthetic carbon assimilation efficiency by phytoplankton in the future coastal ocean, supplement to: Kim, Ju Hyoung; Kim, Kwang Young; Kang, Eun Ju; Lee, Kitack; Kim, Ja-Myung; Park, K T; Shin, Kyoungsoon; Hyun, B; Jeong, Hae Jin (2013): Enhancement of photosynthetic carbon assimilation efficiency by phytoplankton in the future coastal ocean. Biogeosciences, 10(11), 7525-7535

A mesocosm experiment was conducted to evaluate the effects of future climate conditions on photosynthesis and productivity of coastal phytoplankton. Natural phytoplankton assemblages were incubated in field mesocosms under the ambient condition (present condition: ca. 400 ppmv CO2 and ambient temp....

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Bibliographic Details
Main Authors: Kim, Ju Hyoung, Kim, Kwang Young, Kang, Eun Ju, Lee, Kitack, Kim, Ja-Myung, Park, K T, Shin, Kyoungsoon, Hyun, B, Jeong, Hae Jin
Format: Dataset
Language:English
Published: PANGAEA - Data Publisher for Earth & Environmental Science 2013
Subjects:
pH
Online Access:https://dx.doi.org/10.1594/pangaea.833260
https://doi.pangaea.de/10.1594/PANGAEA.833260
id ftdatacite:10.1594/pangaea.833260
record_format openpolar
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Coast and continental shelf
Entire community
Field experiment
Growth/Morphology
Mesocosm or benthocosm
North Pacific
Pelagos
Primary production/Photosynthesis
Temperate
Temperature
Species
Figure
Table
Treatment
Incubation duration
Date
Identification
Chlorophyll a
Nitrate and Nitrite
Phosphate
Silicate
Cell density
Irradiance
Time of day
Effective quantum yield
Electron transport rate, relative
Gross photosynthesis rate, carbon dioxide, per chlorophyll a
Gross community production of carbon dioxide
Gross community production of carbon dioxide, cumulative
Gross community production of carbon dioxide, per chlorophyll a
Maximal electron transport rate, relative
Electron transport rate efficiency
Saturation light intensity
Maximum potential capacity of photosynthesis
Photosynthetic efficiency, carbon production
Grazing rate
Grazing rate, standard deviation
Partial pressure of carbon dioxide water at sea surface temperature wet air
pH
Salinity
Temperature, water
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Carbon, inorganic, dissolved
Alkalinity, total
Aragonite saturation state
Calcite saturation state
Experiment
Fluorometric
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
spellingShingle Coast and continental shelf
Entire community
Field experiment
Growth/Morphology
Mesocosm or benthocosm
North Pacific
Pelagos
Primary production/Photosynthesis
Temperate
Temperature
Species
Figure
Table
Treatment
Incubation duration
Date
Identification
Chlorophyll a
Nitrate and Nitrite
Phosphate
Silicate
Cell density
Irradiance
Time of day
Effective quantum yield
Electron transport rate, relative
Gross photosynthesis rate, carbon dioxide, per chlorophyll a
Gross community production of carbon dioxide
Gross community production of carbon dioxide, cumulative
Gross community production of carbon dioxide, per chlorophyll a
Maximal electron transport rate, relative
Electron transport rate efficiency
Saturation light intensity
Maximum potential capacity of photosynthesis
Photosynthetic efficiency, carbon production
Grazing rate
Grazing rate, standard deviation
Partial pressure of carbon dioxide water at sea surface temperature wet air
pH
Salinity
Temperature, water
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Carbon, inorganic, dissolved
Alkalinity, total
Aragonite saturation state
Calcite saturation state
Experiment
Fluorometric
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
Kim, Ju Hyoung
Kim, Kwang Young
Kang, Eun Ju
Lee, Kitack
Kim, Ja-Myung
Park, K T
Shin, Kyoungsoon
Hyun, B
Jeong, Hae Jin
Enhancement of photosynthetic carbon assimilation efficiency by phytoplankton in the future coastal ocean, supplement to: Kim, Ju Hyoung; Kim, Kwang Young; Kang, Eun Ju; Lee, Kitack; Kim, Ja-Myung; Park, K T; Shin, Kyoungsoon; Hyun, B; Jeong, Hae Jin (2013): Enhancement of photosynthetic carbon assimilation efficiency by phytoplankton in the future coastal ocean. Biogeosciences, 10(11), 7525-7535
topic_facet Coast and continental shelf
Entire community
Field experiment
Growth/Morphology
Mesocosm or benthocosm
North Pacific
Pelagos
Primary production/Photosynthesis
Temperate
Temperature
Species
Figure
Table
Treatment
Incubation duration
Date
Identification
Chlorophyll a
Nitrate and Nitrite
Phosphate
Silicate
Cell density
Irradiance
Time of day
Effective quantum yield
Electron transport rate, relative
Gross photosynthesis rate, carbon dioxide, per chlorophyll a
Gross community production of carbon dioxide
Gross community production of carbon dioxide, cumulative
Gross community production of carbon dioxide, per chlorophyll a
Maximal electron transport rate, relative
Electron transport rate efficiency
Saturation light intensity
Maximum potential capacity of photosynthesis
Photosynthetic efficiency, carbon production
Grazing rate
Grazing rate, standard deviation
Partial pressure of carbon dioxide water at sea surface temperature wet air
pH
Salinity
Temperature, water
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Carbon, inorganic, dissolved
Alkalinity, total
Aragonite saturation state
Calcite saturation state
Experiment
Fluorometric
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
description A mesocosm experiment was conducted to evaluate the effects of future climate conditions on photosynthesis and productivity of coastal phytoplankton. Natural phytoplankton assemblages were incubated in field mesocosms under the ambient condition (present condition: ca. 400 ppmv CO2 and ambient temp.), and two future climate conditions (acidification condition: ca. 900 ppmv CO2 and ambient temp.; greenhouse condition: ca. 900 ppmv CO2 and 3 °C warmer than ambient). Photosynthetic parameters of steady-state light responses curves (LCs; measured by PAM fluorometer) and photosynthesis-irradiance curves (P-I curves; estimated by in situ incorporation of 14C) were compared to three conditions during the experiment period. Under acidification, electron transport efficiency (alpha LC) and photosynthetic 14C assimilation efficiency (alpha) were 10% higher than those of the present condition, but maximum rates of relative electron transport (rETRm,LC) and photosynthetic 14C assimilation (PBmax) were lower than the present condition by about 19% and 7%, respectively. In addition, rETRm,LC and alpha LC were not significantly different between and greenhouse conditions, but PBmax and alpha of greenhouse conditions were higher than those of the present condition by about 9% and 30%, respectively. In particular, the greenhouse condition has drastically higher PBmax and alpha than the present condition more than 60% during the post-bloom period. According to these results, two future ocean conditions have major positive effects on the photosynthesis in terms of energy utilization efficiency for organic carbon fixation through the inorganic carbon assimilation. Despite phytoplankton taking an advantage on photosynthesis, primary production of phytoplankton was not stimulated by future conditions. In particular, biomass of phytoplankton was depressed under both acidification and greenhouse conditions after the the pre-bloom period, and more research is required to suggest that some factors such as grazing activity could be important for regulating phytoplankton bloom in the future ocean. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne et al, 2014) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2014-06-10.
format Dataset
author Kim, Ju Hyoung
Kim, Kwang Young
Kang, Eun Ju
Lee, Kitack
Kim, Ja-Myung
Park, K T
Shin, Kyoungsoon
Hyun, B
Jeong, Hae Jin
author_facet Kim, Ju Hyoung
Kim, Kwang Young
Kang, Eun Ju
Lee, Kitack
Kim, Ja-Myung
Park, K T
Shin, Kyoungsoon
Hyun, B
Jeong, Hae Jin
author_sort Kim, Ju Hyoung
title Enhancement of photosynthetic carbon assimilation efficiency by phytoplankton in the future coastal ocean, supplement to: Kim, Ju Hyoung; Kim, Kwang Young; Kang, Eun Ju; Lee, Kitack; Kim, Ja-Myung; Park, K T; Shin, Kyoungsoon; Hyun, B; Jeong, Hae Jin (2013): Enhancement of photosynthetic carbon assimilation efficiency by phytoplankton in the future coastal ocean. Biogeosciences, 10(11), 7525-7535
title_short Enhancement of photosynthetic carbon assimilation efficiency by phytoplankton in the future coastal ocean, supplement to: Kim, Ju Hyoung; Kim, Kwang Young; Kang, Eun Ju; Lee, Kitack; Kim, Ja-Myung; Park, K T; Shin, Kyoungsoon; Hyun, B; Jeong, Hae Jin (2013): Enhancement of photosynthetic carbon assimilation efficiency by phytoplankton in the future coastal ocean. Biogeosciences, 10(11), 7525-7535
title_full Enhancement of photosynthetic carbon assimilation efficiency by phytoplankton in the future coastal ocean, supplement to: Kim, Ju Hyoung; Kim, Kwang Young; Kang, Eun Ju; Lee, Kitack; Kim, Ja-Myung; Park, K T; Shin, Kyoungsoon; Hyun, B; Jeong, Hae Jin (2013): Enhancement of photosynthetic carbon assimilation efficiency by phytoplankton in the future coastal ocean. Biogeosciences, 10(11), 7525-7535
title_fullStr Enhancement of photosynthetic carbon assimilation efficiency by phytoplankton in the future coastal ocean, supplement to: Kim, Ju Hyoung; Kim, Kwang Young; Kang, Eun Ju; Lee, Kitack; Kim, Ja-Myung; Park, K T; Shin, Kyoungsoon; Hyun, B; Jeong, Hae Jin (2013): Enhancement of photosynthetic carbon assimilation efficiency by phytoplankton in the future coastal ocean. Biogeosciences, 10(11), 7525-7535
title_full_unstemmed Enhancement of photosynthetic carbon assimilation efficiency by phytoplankton in the future coastal ocean, supplement to: Kim, Ju Hyoung; Kim, Kwang Young; Kang, Eun Ju; Lee, Kitack; Kim, Ja-Myung; Park, K T; Shin, Kyoungsoon; Hyun, B; Jeong, Hae Jin (2013): Enhancement of photosynthetic carbon assimilation efficiency by phytoplankton in the future coastal ocean. Biogeosciences, 10(11), 7525-7535
title_sort enhancement of photosynthetic carbon assimilation efficiency by phytoplankton in the future coastal ocean, supplement to: kim, ju hyoung; kim, kwang young; kang, eun ju; lee, kitack; kim, ja-myung; park, k t; shin, kyoungsoon; hyun, b; jeong, hae jin (2013): enhancement of photosynthetic carbon assimilation efficiency by phytoplankton in the future coastal ocean. biogeosciences, 10(11), 7525-7535
publisher PANGAEA - Data Publisher for Earth & Environmental Science
publishDate 2013
url https://dx.doi.org/10.1594/pangaea.833260
https://doi.pangaea.de/10.1594/PANGAEA.833260
geographic Pacific
geographic_facet Pacific
genre Ocean acidification
genre_facet Ocean acidification
op_relation https://cran.r-project.org/package=seacarb
https://dx.doi.org/10.5194/bg-10-7525-2013
https://cran.r-project.org/package=seacarb
op_rights Creative Commons Attribution 3.0 Unported
https://creativecommons.org/licenses/by/3.0/legalcode
cc-by-3.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.1594/pangaea.833260
https://doi.org/10.5194/bg-10-7525-2013
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spelling ftdatacite:10.1594/pangaea.833260 2023-05-15T17:51:37+02:00 Enhancement of photosynthetic carbon assimilation efficiency by phytoplankton in the future coastal ocean, supplement to: Kim, Ju Hyoung; Kim, Kwang Young; Kang, Eun Ju; Lee, Kitack; Kim, Ja-Myung; Park, K T; Shin, Kyoungsoon; Hyun, B; Jeong, Hae Jin (2013): Enhancement of photosynthetic carbon assimilation efficiency by phytoplankton in the future coastal ocean. Biogeosciences, 10(11), 7525-7535 Kim, Ju Hyoung Kim, Kwang Young Kang, Eun Ju Lee, Kitack Kim, Ja-Myung Park, K T Shin, Kyoungsoon Hyun, B Jeong, Hae Jin 2013 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.833260 https://doi.pangaea.de/10.1594/PANGAEA.833260 en eng PANGAEA - Data Publisher for Earth & Environmental Science https://cran.r-project.org/package=seacarb https://dx.doi.org/10.5194/bg-10-7525-2013 https://cran.r-project.org/package=seacarb Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 CC-BY Coast and continental shelf Entire community Field experiment Growth/Morphology Mesocosm or benthocosm North Pacific Pelagos Primary production/Photosynthesis Temperate Temperature Species Figure Table Treatment Incubation duration Date Identification Chlorophyll a Nitrate and Nitrite Phosphate Silicate Cell density Irradiance Time of day Effective quantum yield Electron transport rate, relative Gross photosynthesis rate, carbon dioxide, per chlorophyll a Gross community production of carbon dioxide Gross community production of carbon dioxide, cumulative Gross community production of carbon dioxide, per chlorophyll a Maximal electron transport rate, relative Electron transport rate efficiency Saturation light intensity Maximum potential capacity of photosynthesis Photosynthetic efficiency, carbon production Grazing rate Grazing rate, standard deviation Partial pressure of carbon dioxide water at sea surface temperature wet air pH Salinity Temperature, water Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbonate ion Carbon, inorganic, dissolved Alkalinity, total Aragonite saturation state Calcite saturation state Experiment Fluorometric Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC Supplementary Dataset dataset Dataset 2013 ftdatacite https://doi.org/10.1594/pangaea.833260 https://doi.org/10.5194/bg-10-7525-2013 2021-11-05T12:55:41Z A mesocosm experiment was conducted to evaluate the effects of future climate conditions on photosynthesis and productivity of coastal phytoplankton. Natural phytoplankton assemblages were incubated in field mesocosms under the ambient condition (present condition: ca. 400 ppmv CO2 and ambient temp.), and two future climate conditions (acidification condition: ca. 900 ppmv CO2 and ambient temp.; greenhouse condition: ca. 900 ppmv CO2 and 3 °C warmer than ambient). Photosynthetic parameters of steady-state light responses curves (LCs; measured by PAM fluorometer) and photosynthesis-irradiance curves (P-I curves; estimated by in situ incorporation of 14C) were compared to three conditions during the experiment period. Under acidification, electron transport efficiency (alpha LC) and photosynthetic 14C assimilation efficiency (alpha) were 10% higher than those of the present condition, but maximum rates of relative electron transport (rETRm,LC) and photosynthetic 14C assimilation (PBmax) were lower than the present condition by about 19% and 7%, respectively. In addition, rETRm,LC and alpha LC were not significantly different between and greenhouse conditions, but PBmax and alpha of greenhouse conditions were higher than those of the present condition by about 9% and 30%, respectively. In particular, the greenhouse condition has drastically higher PBmax and alpha than the present condition more than 60% during the post-bloom period. According to these results, two future ocean conditions have major positive effects on the photosynthesis in terms of energy utilization efficiency for organic carbon fixation through the inorganic carbon assimilation. Despite phytoplankton taking an advantage on photosynthesis, primary production of phytoplankton was not stimulated by future conditions. In particular, biomass of phytoplankton was depressed under both acidification and greenhouse conditions after the the pre-bloom period, and more research is required to suggest that some factors such as grazing activity could be important for regulating phytoplankton bloom in the future ocean. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne et al, 2014) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2014-06-10. Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology) Pacific