Experiment effects on marine bacterial community composition: diversity analysis
ARISA OTUsThe file ARISAOTUs.xlsx contains information about the presence (1) and absence (0) of band classes (300 - 1500 bp) in each sample. In the first column, sample IDs are given. The samples are described in detail in columns IM - IQ. 16S ribosomal amplicon pyrosequencing OTUsThe file 454OTUs....
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ftdatacite:10.1594/pangaea.832470 2023-05-15T17:51:26+02:00 Experiment effects on marine bacterial community composition: diversity analysis Krause, Evamaria 2014 application/zip https://dx.doi.org/10.1594/pangaea.832470 https://doi.pangaea.de/10.1594/PANGAEA.832470 en eng PANGAEA - Data Publisher for Earth & Environmental Science https://dx.doi.org/10.1594/pangaea.832471 https://dx.doi.org/10.1371/journal.pone.0047035 Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 CC-BY Biological Impacts of Ocean Acidification BIOACID Dataset dataset 2014 ftdatacite https://doi.org/10.1594/pangaea.832470 https://doi.org/10.1594/pangaea.832471 https://doi.org/10.1371/journal.pone.0047035 2022-02-09T13:11:39Z ARISA OTUsThe file ARISAOTUs.xlsx contains information about the presence (1) and absence (0) of band classes (300 - 1500 bp) in each sample. In the first column, sample IDs are given. The samples are described in detail in columns IM - IQ. 16S ribosomal amplicon pyrosequencing OTUsThe file 454OTUs.xlsx contains the OTU table that was obtained after analyzing the 454 data using mothur. The table gives information on how many sequences of a specific OTU were found in each sample (after randomly selecting the number of sequences present in the smallest sample (n= 494), as described in the paper). In the first row, only sample IDs are given (e.g. AWI1.vGM3F). The samples are described in detail in rows 2136 - 2140. Taxonomic affiliations of OTUs are given in columns CQ - CV. The original 454 sequence data are deposited in the NCBI Sequence Read Archive (accession number SRP014019).SIMPER heat mapsThe files Figure 2_SIMPER_Dilutions.xlsx and Figure 3_SIMPER_pH.xlsx contain the values on which the color-coding of the heat maps in figures 2 and 3 is based. Values were calculated based on the SIMPER analyses given in supplementary tables S3, S4 and S5 and summarize the contributions of single OTUs (16S ribosomal amplicon pyrosequencing) on the family level. Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology) |
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Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
English |
topic |
Biological Impacts of Ocean Acidification BIOACID |
spellingShingle |
Biological Impacts of Ocean Acidification BIOACID Krause, Evamaria Experiment effects on marine bacterial community composition: diversity analysis |
topic_facet |
Biological Impacts of Ocean Acidification BIOACID |
description |
ARISA OTUsThe file ARISAOTUs.xlsx contains information about the presence (1) and absence (0) of band classes (300 - 1500 bp) in each sample. In the first column, sample IDs are given. The samples are described in detail in columns IM - IQ. 16S ribosomal amplicon pyrosequencing OTUsThe file 454OTUs.xlsx contains the OTU table that was obtained after analyzing the 454 data using mothur. The table gives information on how many sequences of a specific OTU were found in each sample (after randomly selecting the number of sequences present in the smallest sample (n= 494), as described in the paper). In the first row, only sample IDs are given (e.g. AWI1.vGM3F). The samples are described in detail in rows 2136 - 2140. Taxonomic affiliations of OTUs are given in columns CQ - CV. The original 454 sequence data are deposited in the NCBI Sequence Read Archive (accession number SRP014019).SIMPER heat mapsThe files Figure 2_SIMPER_Dilutions.xlsx and Figure 3_SIMPER_pH.xlsx contain the values on which the color-coding of the heat maps in figures 2 and 3 is based. Values were calculated based on the SIMPER analyses given in supplementary tables S3, S4 and S5 and summarize the contributions of single OTUs (16S ribosomal amplicon pyrosequencing) on the family level. |
format |
Dataset |
author |
Krause, Evamaria |
author_facet |
Krause, Evamaria |
author_sort |
Krause, Evamaria |
title |
Experiment effects on marine bacterial community composition: diversity analysis |
title_short |
Experiment effects on marine bacterial community composition: diversity analysis |
title_full |
Experiment effects on marine bacterial community composition: diversity analysis |
title_fullStr |
Experiment effects on marine bacterial community composition: diversity analysis |
title_full_unstemmed |
Experiment effects on marine bacterial community composition: diversity analysis |
title_sort |
experiment effects on marine bacterial community composition: diversity analysis |
publisher |
PANGAEA - Data Publisher for Earth & Environmental Science |
publishDate |
2014 |
url |
https://dx.doi.org/10.1594/pangaea.832470 https://doi.pangaea.de/10.1594/PANGAEA.832470 |
genre |
Ocean acidification |
genre_facet |
Ocean acidification |
op_relation |
https://dx.doi.org/10.1594/pangaea.832471 https://dx.doi.org/10.1371/journal.pone.0047035 |
op_rights |
Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.1594/pangaea.832470 https://doi.org/10.1594/pangaea.832471 https://doi.org/10.1371/journal.pone.0047035 |
_version_ |
1766158574972567552 |