Reduced calcification and lack of acclimatization by coral colonies growing in areas of persistent natural acidification, supplement to: Crook, Elizabeth Derse; Cohen, Anne L; Rebolledo-Vieyra, Mario; Hernandez, Laura; Paytan, Adina (2013): Reduced calcification and lack of acclimatization by coral colonies growing in areas of persistent natural acidification. Proceedings of the National Academy of Sciences, 110(27), 11044-11049

As the surface ocean equilibrates with rising atmospheric CO2, the pH of surface seawater is decreasing with potentially negative impacts on coral calcification. A critical question is whether corals will be able to adapt or acclimate to these changes in seawater chemistry. We use high precision CT...

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Main Authors: Crook, Elizabeth Derse, Cohen, Anne L, Rebolledo-Vieyra, Mario, Hernandez, Laura, Paytan, Adina
Format: Dataset
Language:English
Published: PANGAEA - Data Publisher for Earth & Environmental Science 2013
Subjects:
pH
Online Access:https://dx.doi.org/10.1594/pangaea.831619
https://doi.pangaea.de/10.1594/PANGAEA.831619
id ftdatacite:10.1594/pangaea.831619
record_format openpolar
spelling ftdatacite:10.1594/pangaea.831619 2023-05-15T17:37:10+02:00 Reduced calcification and lack of acclimatization by coral colonies growing in areas of persistent natural acidification, supplement to: Crook, Elizabeth Derse; Cohen, Anne L; Rebolledo-Vieyra, Mario; Hernandez, Laura; Paytan, Adina (2013): Reduced calcification and lack of acclimatization by coral colonies growing in areas of persistent natural acidification. Proceedings of the National Academy of Sciences, 110(27), 11044-11049 Crook, Elizabeth Derse Cohen, Anne L Rebolledo-Vieyra, Mario Hernandez, Laura Paytan, Adina 2013 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.831619 https://doi.pangaea.de/10.1594/PANGAEA.831619 en eng PANGAEA - Data Publisher for Earth & Environmental Science https://cran.r-project.org/package=seacarb https://dx.doi.org/10.1073/pnas.1301589110 https://cran.r-project.org/package=seacarb Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 CC-BY Animalia Benthic animals Benthos Calcification/Dissolution Cnidaria Field observation Growth/Morphology North Atlantic Porites astreoides Single species Tropical Figure Species Treatment Linear extension Linear extension, standard deviation Linear extension, standard error Density Density, standard deviation Density, standard error Calcification rate Calcification rate, standard deviation Calcification rate, standard error Thickness Thickness, standard deviation Thickness, standard error Volume ratio Salinity Temperature, water Carbon, inorganic, dissolved Carbon, inorganic, dissolved, standard deviation Alkalinity, total Alkalinity, total, standard deviation pH Aragonite saturation state Aragonite saturation state, standard deviation Calcification rate, ratio Carbonate system computation flag Carbon dioxide Partial pressure of carbon dioxide water at sea surface temperature wet air Fugacity of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbonate ion Calcite saturation state Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC Supplementary Dataset dataset Dataset 2013 ftdatacite https://doi.org/10.1594/pangaea.831619 https://doi.org/10.1073/pnas.1301589110 2021-11-05T12:55:41Z As the surface ocean equilibrates with rising atmospheric CO2, the pH of surface seawater is decreasing with potentially negative impacts on coral calcification. A critical question is whether corals will be able to adapt or acclimate to these changes in seawater chemistry. We use high precision CT scanning of skeletal cores of Porites astreoides, an important Caribbean reef-building coral, to show that calcification rates decrease significantly along a natural gradient in pH and aragonite saturation (Omega arag). This decrease is accompanied by an increase in skeletal erosion and predation by boring organisms. The degree of sensitivity to reduced Oarag measured on our field corals is consistent with that exhibited by the same species in laboratory CO2 manipulation experiments. We conclude that the Porites corals at our field site were not able to acclimatize enough to prevent the impacts of local ocean acidification on their skeletal growth and development, despite spending their entire lifespan in low pH, low Omega arag seawater. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2014-04-09. Dataset North Atlantic Ocean acidification DataCite Metadata Store (German National Library of Science and Technology) Hernandez ENVELOPE(-62.167,-62.167,-74.500,-74.500)
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Animalia
Benthic animals
Benthos
Calcification/Dissolution
Cnidaria
Field observation
Growth/Morphology
North Atlantic
Porites astreoides
Single species
Tropical
Figure
Species
Treatment
Linear extension
Linear extension, standard deviation
Linear extension, standard error
Density
Density, standard deviation
Density, standard error
Calcification rate
Calcification rate, standard deviation
Calcification rate, standard error
Thickness
Thickness, standard deviation
Thickness, standard error
Volume ratio
Salinity
Temperature, water
Carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard deviation
Alkalinity, total
Alkalinity, total, standard deviation
pH
Aragonite saturation state
Aragonite saturation state, standard deviation
Calcification rate, ratio
Carbonate system computation flag
Carbon dioxide
Partial pressure of carbon dioxide water at sea surface temperature wet air
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Calcite saturation state
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
spellingShingle Animalia
Benthic animals
Benthos
Calcification/Dissolution
Cnidaria
Field observation
Growth/Morphology
North Atlantic
Porites astreoides
Single species
Tropical
Figure
Species
Treatment
Linear extension
Linear extension, standard deviation
Linear extension, standard error
Density
Density, standard deviation
Density, standard error
Calcification rate
Calcification rate, standard deviation
Calcification rate, standard error
Thickness
Thickness, standard deviation
Thickness, standard error
Volume ratio
Salinity
Temperature, water
Carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard deviation
Alkalinity, total
Alkalinity, total, standard deviation
pH
Aragonite saturation state
Aragonite saturation state, standard deviation
Calcification rate, ratio
Carbonate system computation flag
Carbon dioxide
Partial pressure of carbon dioxide water at sea surface temperature wet air
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Calcite saturation state
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
Crook, Elizabeth Derse
Cohen, Anne L
Rebolledo-Vieyra, Mario
Hernandez, Laura
Paytan, Adina
Reduced calcification and lack of acclimatization by coral colonies growing in areas of persistent natural acidification, supplement to: Crook, Elizabeth Derse; Cohen, Anne L; Rebolledo-Vieyra, Mario; Hernandez, Laura; Paytan, Adina (2013): Reduced calcification and lack of acclimatization by coral colonies growing in areas of persistent natural acidification. Proceedings of the National Academy of Sciences, 110(27), 11044-11049
topic_facet Animalia
Benthic animals
Benthos
Calcification/Dissolution
Cnidaria
Field observation
Growth/Morphology
North Atlantic
Porites astreoides
Single species
Tropical
Figure
Species
Treatment
Linear extension
Linear extension, standard deviation
Linear extension, standard error
Density
Density, standard deviation
Density, standard error
Calcification rate
Calcification rate, standard deviation
Calcification rate, standard error
Thickness
Thickness, standard deviation
Thickness, standard error
Volume ratio
Salinity
Temperature, water
Carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard deviation
Alkalinity, total
Alkalinity, total, standard deviation
pH
Aragonite saturation state
Aragonite saturation state, standard deviation
Calcification rate, ratio
Carbonate system computation flag
Carbon dioxide
Partial pressure of carbon dioxide water at sea surface temperature wet air
Fugacity of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Calcite saturation state
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
description As the surface ocean equilibrates with rising atmospheric CO2, the pH of surface seawater is decreasing with potentially negative impacts on coral calcification. A critical question is whether corals will be able to adapt or acclimate to these changes in seawater chemistry. We use high precision CT scanning of skeletal cores of Porites astreoides, an important Caribbean reef-building coral, to show that calcification rates decrease significantly along a natural gradient in pH and aragonite saturation (Omega arag). This decrease is accompanied by an increase in skeletal erosion and predation by boring organisms. The degree of sensitivity to reduced Oarag measured on our field corals is consistent with that exhibited by the same species in laboratory CO2 manipulation experiments. We conclude that the Porites corals at our field site were not able to acclimatize enough to prevent the impacts of local ocean acidification on their skeletal growth and development, despite spending their entire lifespan in low pH, low Omega arag seawater. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2014-04-09.
format Dataset
author Crook, Elizabeth Derse
Cohen, Anne L
Rebolledo-Vieyra, Mario
Hernandez, Laura
Paytan, Adina
author_facet Crook, Elizabeth Derse
Cohen, Anne L
Rebolledo-Vieyra, Mario
Hernandez, Laura
Paytan, Adina
author_sort Crook, Elizabeth Derse
title Reduced calcification and lack of acclimatization by coral colonies growing in areas of persistent natural acidification, supplement to: Crook, Elizabeth Derse; Cohen, Anne L; Rebolledo-Vieyra, Mario; Hernandez, Laura; Paytan, Adina (2013): Reduced calcification and lack of acclimatization by coral colonies growing in areas of persistent natural acidification. Proceedings of the National Academy of Sciences, 110(27), 11044-11049
title_short Reduced calcification and lack of acclimatization by coral colonies growing in areas of persistent natural acidification, supplement to: Crook, Elizabeth Derse; Cohen, Anne L; Rebolledo-Vieyra, Mario; Hernandez, Laura; Paytan, Adina (2013): Reduced calcification and lack of acclimatization by coral colonies growing in areas of persistent natural acidification. Proceedings of the National Academy of Sciences, 110(27), 11044-11049
title_full Reduced calcification and lack of acclimatization by coral colonies growing in areas of persistent natural acidification, supplement to: Crook, Elizabeth Derse; Cohen, Anne L; Rebolledo-Vieyra, Mario; Hernandez, Laura; Paytan, Adina (2013): Reduced calcification and lack of acclimatization by coral colonies growing in areas of persistent natural acidification. Proceedings of the National Academy of Sciences, 110(27), 11044-11049
title_fullStr Reduced calcification and lack of acclimatization by coral colonies growing in areas of persistent natural acidification, supplement to: Crook, Elizabeth Derse; Cohen, Anne L; Rebolledo-Vieyra, Mario; Hernandez, Laura; Paytan, Adina (2013): Reduced calcification and lack of acclimatization by coral colonies growing in areas of persistent natural acidification. Proceedings of the National Academy of Sciences, 110(27), 11044-11049
title_full_unstemmed Reduced calcification and lack of acclimatization by coral colonies growing in areas of persistent natural acidification, supplement to: Crook, Elizabeth Derse; Cohen, Anne L; Rebolledo-Vieyra, Mario; Hernandez, Laura; Paytan, Adina (2013): Reduced calcification and lack of acclimatization by coral colonies growing in areas of persistent natural acidification. Proceedings of the National Academy of Sciences, 110(27), 11044-11049
title_sort reduced calcification and lack of acclimatization by coral colonies growing in areas of persistent natural acidification, supplement to: crook, elizabeth derse; cohen, anne l; rebolledo-vieyra, mario; hernandez, laura; paytan, adina (2013): reduced calcification and lack of acclimatization by coral colonies growing in areas of persistent natural acidification. proceedings of the national academy of sciences, 110(27), 11044-11049
publisher PANGAEA - Data Publisher for Earth & Environmental Science
publishDate 2013
url https://dx.doi.org/10.1594/pangaea.831619
https://doi.pangaea.de/10.1594/PANGAEA.831619
long_lat ENVELOPE(-62.167,-62.167,-74.500,-74.500)
geographic Hernandez
geographic_facet Hernandez
genre North Atlantic
Ocean acidification
genre_facet North Atlantic
Ocean acidification
op_relation https://cran.r-project.org/package=seacarb
https://dx.doi.org/10.1073/pnas.1301589110
https://cran.r-project.org/package=seacarb
op_rights Creative Commons Attribution 3.0 Unported
https://creativecommons.org/licenses/by/3.0/legalcode
cc-by-3.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.1594/pangaea.831619
https://doi.org/10.1073/pnas.1301589110
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