Physiological responses of the marine diatom Thalassiosira pseudonana to increased pCO2 and seawater acidity, supplement to: Yang, Gui yuan; Gao, Kunshan (2012): Physiological responses of the marine diatom Thalassiosira pseudonana to increased pCO2 and seawater acidity. Marine Environmental Research, 79, 142-151
We studied the effects of elevated CO2 concentration and seawater acidity on inorganic carbon acquisition, photoinhibition and photoprotection as well as growth and respiration in the marine diatom Thalassiosira pseudonana. After having grown under the elevated CO2 level (1000 µatm, pH 7.83) at sub-...
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Language: | English |
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PANGAEA - Data Publisher for Earth & Environmental Science
2012
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Online Access: | https://dx.doi.org/10.1594/pangaea.826461 https://doi.pangaea.de/10.1594/PANGAEA.826461 |
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openpolar |
institution |
Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
English |
topic |
Laboratory experiment Laboratory strains Light North Pacific Ochrophyta Phytoplankton Respiration Thalassiosira pseudonana Treatment Identification Species Carbon, inorganic, dissolved Irradiance Photosynthetic carbon fixation rate per cell Photosynthetic carbon fixation rate, standard deviation Maximal electron transport rate, relative Electron transport rate, relative, standard deviation Carbon, inorganic, dissolved, reciprocal of photosynthetic affinity value Carbon, inorganic, dissolved, reciprocal of photosynthetic affinity value, standard deviation Carbon dioxide, reciprocal of photosynthetic affinity value Carbon dioxide, reciprocal of photosynthetic affinity value, standard deviation Photosynthetic carbon fixation per cell, maximum velocity Photosynthetic carbon fixation, maximum velocity, standard deviation Electron transport rate, relative, maximum velocity Electron transport rate, relative, maximum velocity, standard deviation Growth rate Growth rate, standard deviation Chlorophyll a per cell Chlorophyll a, standard deviation Chlorophyll c per cell Chlorophyll c, standard deviation Gross carbon fixation rate per cell Gross carbon fixation rate, standard deviation Respiration rate, oxygen, per cell Respiration rate, oxygen, standard deviation Photosynthetic efficiency Photosynthetic efficiency, standard deviation Light saturation point Light saturation point, standard deviation Time in seconds Effective quantum yield Effective quantum yield, standard deviation Effective absorbance cross-section of photosystem II Effective absorbance cross-section of photosystem II, standard deviation Non photochemical quenching Non photochemical quenching, standard deviation Temperature, water Salinity pH pH, standard deviation Carbon, inorganic, dissolved, standard deviation Bicarbonate ion Bicarbonate ion, standard deviation Carbonate ion Carbonate ion, standard deviation Carbon dioxide Carbon dioxide, standard deviation Alkalinity, total Alkalinity, total, standard deviation Carbonate system computation flag Partial pressure of carbon dioxide water at sea surface temperature wet air Fugacity of carbon dioxide water at sea surface temperature wet air Aragonite saturation state Calcite saturation state Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC |
spellingShingle |
Laboratory experiment Laboratory strains Light North Pacific Ochrophyta Phytoplankton Respiration Thalassiosira pseudonana Treatment Identification Species Carbon, inorganic, dissolved Irradiance Photosynthetic carbon fixation rate per cell Photosynthetic carbon fixation rate, standard deviation Maximal electron transport rate, relative Electron transport rate, relative, standard deviation Carbon, inorganic, dissolved, reciprocal of photosynthetic affinity value Carbon, inorganic, dissolved, reciprocal of photosynthetic affinity value, standard deviation Carbon dioxide, reciprocal of photosynthetic affinity value Carbon dioxide, reciprocal of photosynthetic affinity value, standard deviation Photosynthetic carbon fixation per cell, maximum velocity Photosynthetic carbon fixation, maximum velocity, standard deviation Electron transport rate, relative, maximum velocity Electron transport rate, relative, maximum velocity, standard deviation Growth rate Growth rate, standard deviation Chlorophyll a per cell Chlorophyll a, standard deviation Chlorophyll c per cell Chlorophyll c, standard deviation Gross carbon fixation rate per cell Gross carbon fixation rate, standard deviation Respiration rate, oxygen, per cell Respiration rate, oxygen, standard deviation Photosynthetic efficiency Photosynthetic efficiency, standard deviation Light saturation point Light saturation point, standard deviation Time in seconds Effective quantum yield Effective quantum yield, standard deviation Effective absorbance cross-section of photosystem II Effective absorbance cross-section of photosystem II, standard deviation Non photochemical quenching Non photochemical quenching, standard deviation Temperature, water Salinity pH pH, standard deviation Carbon, inorganic, dissolved, standard deviation Bicarbonate ion Bicarbonate ion, standard deviation Carbonate ion Carbonate ion, standard deviation Carbon dioxide Carbon dioxide, standard deviation Alkalinity, total Alkalinity, total, standard deviation Carbonate system computation flag Partial pressure of carbon dioxide water at sea surface temperature wet air Fugacity of carbon dioxide water at sea surface temperature wet air Aragonite saturation state Calcite saturation state Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC Yang, Gui yuan Gao, Kunshan Physiological responses of the marine diatom Thalassiosira pseudonana to increased pCO2 and seawater acidity, supplement to: Yang, Gui yuan; Gao, Kunshan (2012): Physiological responses of the marine diatom Thalassiosira pseudonana to increased pCO2 and seawater acidity. Marine Environmental Research, 79, 142-151 |
topic_facet |
Laboratory experiment Laboratory strains Light North Pacific Ochrophyta Phytoplankton Respiration Thalassiosira pseudonana Treatment Identification Species Carbon, inorganic, dissolved Irradiance Photosynthetic carbon fixation rate per cell Photosynthetic carbon fixation rate, standard deviation Maximal electron transport rate, relative Electron transport rate, relative, standard deviation Carbon, inorganic, dissolved, reciprocal of photosynthetic affinity value Carbon, inorganic, dissolved, reciprocal of photosynthetic affinity value, standard deviation Carbon dioxide, reciprocal of photosynthetic affinity value Carbon dioxide, reciprocal of photosynthetic affinity value, standard deviation Photosynthetic carbon fixation per cell, maximum velocity Photosynthetic carbon fixation, maximum velocity, standard deviation Electron transport rate, relative, maximum velocity Electron transport rate, relative, maximum velocity, standard deviation Growth rate Growth rate, standard deviation Chlorophyll a per cell Chlorophyll a, standard deviation Chlorophyll c per cell Chlorophyll c, standard deviation Gross carbon fixation rate per cell Gross carbon fixation rate, standard deviation Respiration rate, oxygen, per cell Respiration rate, oxygen, standard deviation Photosynthetic efficiency Photosynthetic efficiency, standard deviation Light saturation point Light saturation point, standard deviation Time in seconds Effective quantum yield Effective quantum yield, standard deviation Effective absorbance cross-section of photosystem II Effective absorbance cross-section of photosystem II, standard deviation Non photochemical quenching Non photochemical quenching, standard deviation Temperature, water Salinity pH pH, standard deviation Carbon, inorganic, dissolved, standard deviation Bicarbonate ion Bicarbonate ion, standard deviation Carbonate ion Carbonate ion, standard deviation Carbon dioxide Carbon dioxide, standard deviation Alkalinity, total Alkalinity, total, standard deviation Carbonate system computation flag Partial pressure of carbon dioxide water at sea surface temperature wet air Fugacity of carbon dioxide water at sea surface temperature wet air Aragonite saturation state Calcite saturation state Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC |
description |
We studied the effects of elevated CO2 concentration and seawater acidity on inorganic carbon acquisition, photoinhibition and photoprotection as well as growth and respiration in the marine diatom Thalassiosira pseudonana. After having grown under the elevated CO2 level (1000 µatm, pH 7.83) at sub-saturating photosynthetically active radiation (PAR, 75 µmol photons/m**2/s) for 20 generations, photosynthesis and dark respiration of the alga increased by 25% (14.69 ± 2.55 fmol C/cell/h) and by 35% (4.42 ± 0.98 fmol O2/cell/h), respectively, compared to that grown under the ambient CO2 level (390 µatm, pH 8.16), leading to insignificant effects on growth (1.09 ± 0.08 (1/d))v 1.04 ± 0.07 (1/d)). The photosynthetic affinity for CO2 was lowered in the high-CO2 grown cells, reflecting a down-regulation of the CO2 concentrating mechanism (CCM). When exposed to an excessively high level of PAR, photochemical and non-photochemical quenching responded similarly in the low- and high-CO2 grown cells, reflecting that photoinhibition was not influenced by the enriched level of CO2. In T. pseudonana, it appeared that the energy saved due to the down-regulated CCM did not contribute to any additional light stress as previously found in another diatom Phaeodactylum tricornutum, indicating differential physiological responses to ocean acidification between these two diatom species. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2014-01-20. |
format |
Dataset |
author |
Yang, Gui yuan Gao, Kunshan |
author_facet |
Yang, Gui yuan Gao, Kunshan |
author_sort |
Yang, Gui yuan |
title |
Physiological responses of the marine diatom Thalassiosira pseudonana to increased pCO2 and seawater acidity, supplement to: Yang, Gui yuan; Gao, Kunshan (2012): Physiological responses of the marine diatom Thalassiosira pseudonana to increased pCO2 and seawater acidity. Marine Environmental Research, 79, 142-151 |
title_short |
Physiological responses of the marine diatom Thalassiosira pseudonana to increased pCO2 and seawater acidity, supplement to: Yang, Gui yuan; Gao, Kunshan (2012): Physiological responses of the marine diatom Thalassiosira pseudonana to increased pCO2 and seawater acidity. Marine Environmental Research, 79, 142-151 |
title_full |
Physiological responses of the marine diatom Thalassiosira pseudonana to increased pCO2 and seawater acidity, supplement to: Yang, Gui yuan; Gao, Kunshan (2012): Physiological responses of the marine diatom Thalassiosira pseudonana to increased pCO2 and seawater acidity. Marine Environmental Research, 79, 142-151 |
title_fullStr |
Physiological responses of the marine diatom Thalassiosira pseudonana to increased pCO2 and seawater acidity, supplement to: Yang, Gui yuan; Gao, Kunshan (2012): Physiological responses of the marine diatom Thalassiosira pseudonana to increased pCO2 and seawater acidity. Marine Environmental Research, 79, 142-151 |
title_full_unstemmed |
Physiological responses of the marine diatom Thalassiosira pseudonana to increased pCO2 and seawater acidity, supplement to: Yang, Gui yuan; Gao, Kunshan (2012): Physiological responses of the marine diatom Thalassiosira pseudonana to increased pCO2 and seawater acidity. Marine Environmental Research, 79, 142-151 |
title_sort |
physiological responses of the marine diatom thalassiosira pseudonana to increased pco2 and seawater acidity, supplement to: yang, gui yuan; gao, kunshan (2012): physiological responses of the marine diatom thalassiosira pseudonana to increased pco2 and seawater acidity. marine environmental research, 79, 142-151 |
publisher |
PANGAEA - Data Publisher for Earth & Environmental Science |
publishDate |
2012 |
url |
https://dx.doi.org/10.1594/pangaea.826461 https://doi.pangaea.de/10.1594/PANGAEA.826461 |
geographic |
Pacific |
geographic_facet |
Pacific |
genre |
Ocean acidification |
genre_facet |
Ocean acidification |
op_relation |
https://cran.r-project.org/package=seacarb https://dx.doi.org/10.1016/j.marenvres.2012.06.002 https://cran.r-project.org/package=seacarb |
op_rights |
Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.1594/pangaea.826461 https://doi.org/10.1016/j.marenvres.2012.06.002 |
_version_ |
1766158286771453952 |
spelling |
ftdatacite:10.1594/pangaea.826461 2023-05-15T17:51:12+02:00 Physiological responses of the marine diatom Thalassiosira pseudonana to increased pCO2 and seawater acidity, supplement to: Yang, Gui yuan; Gao, Kunshan (2012): Physiological responses of the marine diatom Thalassiosira pseudonana to increased pCO2 and seawater acidity. Marine Environmental Research, 79, 142-151 Yang, Gui yuan Gao, Kunshan 2012 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.826461 https://doi.pangaea.de/10.1594/PANGAEA.826461 en eng PANGAEA - Data Publisher for Earth & Environmental Science https://cran.r-project.org/package=seacarb https://dx.doi.org/10.1016/j.marenvres.2012.06.002 https://cran.r-project.org/package=seacarb Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 CC-BY Laboratory experiment Laboratory strains Light North Pacific Ochrophyta Phytoplankton Respiration Thalassiosira pseudonana Treatment Identification Species Carbon, inorganic, dissolved Irradiance Photosynthetic carbon fixation rate per cell Photosynthetic carbon fixation rate, standard deviation Maximal electron transport rate, relative Electron transport rate, relative, standard deviation Carbon, inorganic, dissolved, reciprocal of photosynthetic affinity value Carbon, inorganic, dissolved, reciprocal of photosynthetic affinity value, standard deviation Carbon dioxide, reciprocal of photosynthetic affinity value Carbon dioxide, reciprocal of photosynthetic affinity value, standard deviation Photosynthetic carbon fixation per cell, maximum velocity Photosynthetic carbon fixation, maximum velocity, standard deviation Electron transport rate, relative, maximum velocity Electron transport rate, relative, maximum velocity, standard deviation Growth rate Growth rate, standard deviation Chlorophyll a per cell Chlorophyll a, standard deviation Chlorophyll c per cell Chlorophyll c, standard deviation Gross carbon fixation rate per cell Gross carbon fixation rate, standard deviation Respiration rate, oxygen, per cell Respiration rate, oxygen, standard deviation Photosynthetic efficiency Photosynthetic efficiency, standard deviation Light saturation point Light saturation point, standard deviation Time in seconds Effective quantum yield Effective quantum yield, standard deviation Effective absorbance cross-section of photosystem II Effective absorbance cross-section of photosystem II, standard deviation Non photochemical quenching Non photochemical quenching, standard deviation Temperature, water Salinity pH pH, standard deviation Carbon, inorganic, dissolved, standard deviation Bicarbonate ion Bicarbonate ion, standard deviation Carbonate ion Carbonate ion, standard deviation Carbon dioxide Carbon dioxide, standard deviation Alkalinity, total Alkalinity, total, standard deviation Carbonate system computation flag Partial pressure of carbon dioxide water at sea surface temperature wet air Fugacity of carbon dioxide water at sea surface temperature wet air Aragonite saturation state Calcite saturation state Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC Supplementary Dataset dataset Dataset 2012 ftdatacite https://doi.org/10.1594/pangaea.826461 https://doi.org/10.1016/j.marenvres.2012.06.002 2022-02-08T16:27:35Z We studied the effects of elevated CO2 concentration and seawater acidity on inorganic carbon acquisition, photoinhibition and photoprotection as well as growth and respiration in the marine diatom Thalassiosira pseudonana. After having grown under the elevated CO2 level (1000 µatm, pH 7.83) at sub-saturating photosynthetically active radiation (PAR, 75 µmol photons/m**2/s) for 20 generations, photosynthesis and dark respiration of the alga increased by 25% (14.69 ± 2.55 fmol C/cell/h) and by 35% (4.42 ± 0.98 fmol O2/cell/h), respectively, compared to that grown under the ambient CO2 level (390 µatm, pH 8.16), leading to insignificant effects on growth (1.09 ± 0.08 (1/d))v 1.04 ± 0.07 (1/d)). The photosynthetic affinity for CO2 was lowered in the high-CO2 grown cells, reflecting a down-regulation of the CO2 concentrating mechanism (CCM). When exposed to an excessively high level of PAR, photochemical and non-photochemical quenching responded similarly in the low- and high-CO2 grown cells, reflecting that photoinhibition was not influenced by the enriched level of CO2. In T. pseudonana, it appeared that the energy saved due to the down-regulated CCM did not contribute to any additional light stress as previously found in another diatom Phaeodactylum tricornutum, indicating differential physiological responses to ocean acidification between these two diatom species. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2014-01-20. Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology) Pacific |