Physiological responses of the marine diatom Thalassiosira pseudonana to increased pCO2 and seawater acidity, supplement to: Yang, Gui yuan; Gao, Kunshan (2012): Physiological responses of the marine diatom Thalassiosira pseudonana to increased pCO2 and seawater acidity. Marine Environmental Research, 79, 142-151

We studied the effects of elevated CO2 concentration and seawater acidity on inorganic carbon acquisition, photoinhibition and photoprotection as well as growth and respiration in the marine diatom Thalassiosira pseudonana. After having grown under the elevated CO2 level (1000 µatm, pH 7.83) at sub-...

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Bibliographic Details
Main Authors: Yang, Gui yuan, Gao, Kunshan
Format: Dataset
Language:English
Published: PANGAEA - Data Publisher for Earth & Environmental Science 2012
Subjects:
pH
Online Access:https://dx.doi.org/10.1594/pangaea.826461
https://doi.pangaea.de/10.1594/PANGAEA.826461
id ftdatacite:10.1594/pangaea.826461
record_format openpolar
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Laboratory experiment
Laboratory strains
Light
North Pacific
Ochrophyta
Phytoplankton
Respiration
Thalassiosira pseudonana
Treatment
Identification
Species
Carbon, inorganic, dissolved
Irradiance
Photosynthetic carbon fixation rate per cell
Photosynthetic carbon fixation rate, standard deviation
Maximal electron transport rate, relative
Electron transport rate, relative, standard deviation
Carbon, inorganic, dissolved, reciprocal of photosynthetic affinity value
Carbon, inorganic, dissolved, reciprocal of photosynthetic affinity value, standard deviation
Carbon dioxide, reciprocal of photosynthetic affinity value
Carbon dioxide, reciprocal of photosynthetic affinity value, standard deviation
Photosynthetic carbon fixation per cell, maximum velocity
Photosynthetic carbon fixation, maximum velocity, standard deviation
Electron transport rate, relative, maximum velocity
Electron transport rate, relative, maximum velocity, standard deviation
Growth rate
Growth rate, standard deviation
Chlorophyll a per cell
Chlorophyll a, standard deviation
Chlorophyll c per cell
Chlorophyll c, standard deviation
Gross carbon fixation rate per cell
Gross carbon fixation rate, standard deviation
Respiration rate, oxygen, per cell
Respiration rate, oxygen, standard deviation
Photosynthetic efficiency
Photosynthetic efficiency, standard deviation
Light saturation point
Light saturation point, standard deviation
Time in seconds
Effective quantum yield
Effective quantum yield, standard deviation
Effective absorbance cross-section of photosystem II
Effective absorbance cross-section of photosystem II, standard deviation
Non photochemical quenching
Non photochemical quenching, standard deviation
Temperature, water
Salinity
pH
pH, standard deviation
Carbon, inorganic, dissolved, standard deviation
Bicarbonate ion
Bicarbonate ion, standard deviation
Carbonate ion
Carbonate ion, standard deviation
Carbon dioxide
Carbon dioxide, standard deviation
Alkalinity, total
Alkalinity, total, standard deviation
Carbonate system computation flag
Partial pressure of carbon dioxide water at sea surface temperature wet air
Fugacity of carbon dioxide water at sea surface temperature wet air
Aragonite saturation state
Calcite saturation state
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
spellingShingle Laboratory experiment
Laboratory strains
Light
North Pacific
Ochrophyta
Phytoplankton
Respiration
Thalassiosira pseudonana
Treatment
Identification
Species
Carbon, inorganic, dissolved
Irradiance
Photosynthetic carbon fixation rate per cell
Photosynthetic carbon fixation rate, standard deviation
Maximal electron transport rate, relative
Electron transport rate, relative, standard deviation
Carbon, inorganic, dissolved, reciprocal of photosynthetic affinity value
Carbon, inorganic, dissolved, reciprocal of photosynthetic affinity value, standard deviation
Carbon dioxide, reciprocal of photosynthetic affinity value
Carbon dioxide, reciprocal of photosynthetic affinity value, standard deviation
Photosynthetic carbon fixation per cell, maximum velocity
Photosynthetic carbon fixation, maximum velocity, standard deviation
Electron transport rate, relative, maximum velocity
Electron transport rate, relative, maximum velocity, standard deviation
Growth rate
Growth rate, standard deviation
Chlorophyll a per cell
Chlorophyll a, standard deviation
Chlorophyll c per cell
Chlorophyll c, standard deviation
Gross carbon fixation rate per cell
Gross carbon fixation rate, standard deviation
Respiration rate, oxygen, per cell
Respiration rate, oxygen, standard deviation
Photosynthetic efficiency
Photosynthetic efficiency, standard deviation
Light saturation point
Light saturation point, standard deviation
Time in seconds
Effective quantum yield
Effective quantum yield, standard deviation
Effective absorbance cross-section of photosystem II
Effective absorbance cross-section of photosystem II, standard deviation
Non photochemical quenching
Non photochemical quenching, standard deviation
Temperature, water
Salinity
pH
pH, standard deviation
Carbon, inorganic, dissolved, standard deviation
Bicarbonate ion
Bicarbonate ion, standard deviation
Carbonate ion
Carbonate ion, standard deviation
Carbon dioxide
Carbon dioxide, standard deviation
Alkalinity, total
Alkalinity, total, standard deviation
Carbonate system computation flag
Partial pressure of carbon dioxide water at sea surface temperature wet air
Fugacity of carbon dioxide water at sea surface temperature wet air
Aragonite saturation state
Calcite saturation state
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
Yang, Gui yuan
Gao, Kunshan
Physiological responses of the marine diatom Thalassiosira pseudonana to increased pCO2 and seawater acidity, supplement to: Yang, Gui yuan; Gao, Kunshan (2012): Physiological responses of the marine diatom Thalassiosira pseudonana to increased pCO2 and seawater acidity. Marine Environmental Research, 79, 142-151
topic_facet Laboratory experiment
Laboratory strains
Light
North Pacific
Ochrophyta
Phytoplankton
Respiration
Thalassiosira pseudonana
Treatment
Identification
Species
Carbon, inorganic, dissolved
Irradiance
Photosynthetic carbon fixation rate per cell
Photosynthetic carbon fixation rate, standard deviation
Maximal electron transport rate, relative
Electron transport rate, relative, standard deviation
Carbon, inorganic, dissolved, reciprocal of photosynthetic affinity value
Carbon, inorganic, dissolved, reciprocal of photosynthetic affinity value, standard deviation
Carbon dioxide, reciprocal of photosynthetic affinity value
Carbon dioxide, reciprocal of photosynthetic affinity value, standard deviation
Photosynthetic carbon fixation per cell, maximum velocity
Photosynthetic carbon fixation, maximum velocity, standard deviation
Electron transport rate, relative, maximum velocity
Electron transport rate, relative, maximum velocity, standard deviation
Growth rate
Growth rate, standard deviation
Chlorophyll a per cell
Chlorophyll a, standard deviation
Chlorophyll c per cell
Chlorophyll c, standard deviation
Gross carbon fixation rate per cell
Gross carbon fixation rate, standard deviation
Respiration rate, oxygen, per cell
Respiration rate, oxygen, standard deviation
Photosynthetic efficiency
Photosynthetic efficiency, standard deviation
Light saturation point
Light saturation point, standard deviation
Time in seconds
Effective quantum yield
Effective quantum yield, standard deviation
Effective absorbance cross-section of photosystem II
Effective absorbance cross-section of photosystem II, standard deviation
Non photochemical quenching
Non photochemical quenching, standard deviation
Temperature, water
Salinity
pH
pH, standard deviation
Carbon, inorganic, dissolved, standard deviation
Bicarbonate ion
Bicarbonate ion, standard deviation
Carbonate ion
Carbonate ion, standard deviation
Carbon dioxide
Carbon dioxide, standard deviation
Alkalinity, total
Alkalinity, total, standard deviation
Carbonate system computation flag
Partial pressure of carbon dioxide water at sea surface temperature wet air
Fugacity of carbon dioxide water at sea surface temperature wet air
Aragonite saturation state
Calcite saturation state
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
description We studied the effects of elevated CO2 concentration and seawater acidity on inorganic carbon acquisition, photoinhibition and photoprotection as well as growth and respiration in the marine diatom Thalassiosira pseudonana. After having grown under the elevated CO2 level (1000 µatm, pH 7.83) at sub-saturating photosynthetically active radiation (PAR, 75 µmol photons/m**2/s) for 20 generations, photosynthesis and dark respiration of the alga increased by 25% (14.69 ± 2.55 fmol C/cell/h) and by 35% (4.42 ± 0.98 fmol O2/cell/h), respectively, compared to that grown under the ambient CO2 level (390 µatm, pH 8.16), leading to insignificant effects on growth (1.09 ± 0.08 (1/d))v 1.04 ± 0.07 (1/d)). The photosynthetic affinity for CO2 was lowered in the high-CO2 grown cells, reflecting a down-regulation of the CO2 concentrating mechanism (CCM). When exposed to an excessively high level of PAR, photochemical and non-photochemical quenching responded similarly in the low- and high-CO2 grown cells, reflecting that photoinhibition was not influenced by the enriched level of CO2. In T. pseudonana, it appeared that the energy saved due to the down-regulated CCM did not contribute to any additional light stress as previously found in another diatom Phaeodactylum tricornutum, indicating differential physiological responses to ocean acidification between these two diatom species. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2014-01-20.
format Dataset
author Yang, Gui yuan
Gao, Kunshan
author_facet Yang, Gui yuan
Gao, Kunshan
author_sort Yang, Gui yuan
title Physiological responses of the marine diatom Thalassiosira pseudonana to increased pCO2 and seawater acidity, supplement to: Yang, Gui yuan; Gao, Kunshan (2012): Physiological responses of the marine diatom Thalassiosira pseudonana to increased pCO2 and seawater acidity. Marine Environmental Research, 79, 142-151
title_short Physiological responses of the marine diatom Thalassiosira pseudonana to increased pCO2 and seawater acidity, supplement to: Yang, Gui yuan; Gao, Kunshan (2012): Physiological responses of the marine diatom Thalassiosira pseudonana to increased pCO2 and seawater acidity. Marine Environmental Research, 79, 142-151
title_full Physiological responses of the marine diatom Thalassiosira pseudonana to increased pCO2 and seawater acidity, supplement to: Yang, Gui yuan; Gao, Kunshan (2012): Physiological responses of the marine diatom Thalassiosira pseudonana to increased pCO2 and seawater acidity. Marine Environmental Research, 79, 142-151
title_fullStr Physiological responses of the marine diatom Thalassiosira pseudonana to increased pCO2 and seawater acidity, supplement to: Yang, Gui yuan; Gao, Kunshan (2012): Physiological responses of the marine diatom Thalassiosira pseudonana to increased pCO2 and seawater acidity. Marine Environmental Research, 79, 142-151
title_full_unstemmed Physiological responses of the marine diatom Thalassiosira pseudonana to increased pCO2 and seawater acidity, supplement to: Yang, Gui yuan; Gao, Kunshan (2012): Physiological responses of the marine diatom Thalassiosira pseudonana to increased pCO2 and seawater acidity. Marine Environmental Research, 79, 142-151
title_sort physiological responses of the marine diatom thalassiosira pseudonana to increased pco2 and seawater acidity, supplement to: yang, gui yuan; gao, kunshan (2012): physiological responses of the marine diatom thalassiosira pseudonana to increased pco2 and seawater acidity. marine environmental research, 79, 142-151
publisher PANGAEA - Data Publisher for Earth & Environmental Science
publishDate 2012
url https://dx.doi.org/10.1594/pangaea.826461
https://doi.pangaea.de/10.1594/PANGAEA.826461
geographic Pacific
geographic_facet Pacific
genre Ocean acidification
genre_facet Ocean acidification
op_relation https://cran.r-project.org/package=seacarb
https://dx.doi.org/10.1016/j.marenvres.2012.06.002
https://cran.r-project.org/package=seacarb
op_rights Creative Commons Attribution 3.0 Unported
https://creativecommons.org/licenses/by/3.0/legalcode
cc-by-3.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.1594/pangaea.826461
https://doi.org/10.1016/j.marenvres.2012.06.002
_version_ 1766158286771453952
spelling ftdatacite:10.1594/pangaea.826461 2023-05-15T17:51:12+02:00 Physiological responses of the marine diatom Thalassiosira pseudonana to increased pCO2 and seawater acidity, supplement to: Yang, Gui yuan; Gao, Kunshan (2012): Physiological responses of the marine diatom Thalassiosira pseudonana to increased pCO2 and seawater acidity. Marine Environmental Research, 79, 142-151 Yang, Gui yuan Gao, Kunshan 2012 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.826461 https://doi.pangaea.de/10.1594/PANGAEA.826461 en eng PANGAEA - Data Publisher for Earth & Environmental Science https://cran.r-project.org/package=seacarb https://dx.doi.org/10.1016/j.marenvres.2012.06.002 https://cran.r-project.org/package=seacarb Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 CC-BY Laboratory experiment Laboratory strains Light North Pacific Ochrophyta Phytoplankton Respiration Thalassiosira pseudonana Treatment Identification Species Carbon, inorganic, dissolved Irradiance Photosynthetic carbon fixation rate per cell Photosynthetic carbon fixation rate, standard deviation Maximal electron transport rate, relative Electron transport rate, relative, standard deviation Carbon, inorganic, dissolved, reciprocal of photosynthetic affinity value Carbon, inorganic, dissolved, reciprocal of photosynthetic affinity value, standard deviation Carbon dioxide, reciprocal of photosynthetic affinity value Carbon dioxide, reciprocal of photosynthetic affinity value, standard deviation Photosynthetic carbon fixation per cell, maximum velocity Photosynthetic carbon fixation, maximum velocity, standard deviation Electron transport rate, relative, maximum velocity Electron transport rate, relative, maximum velocity, standard deviation Growth rate Growth rate, standard deviation Chlorophyll a per cell Chlorophyll a, standard deviation Chlorophyll c per cell Chlorophyll c, standard deviation Gross carbon fixation rate per cell Gross carbon fixation rate, standard deviation Respiration rate, oxygen, per cell Respiration rate, oxygen, standard deviation Photosynthetic efficiency Photosynthetic efficiency, standard deviation Light saturation point Light saturation point, standard deviation Time in seconds Effective quantum yield Effective quantum yield, standard deviation Effective absorbance cross-section of photosystem II Effective absorbance cross-section of photosystem II, standard deviation Non photochemical quenching Non photochemical quenching, standard deviation Temperature, water Salinity pH pH, standard deviation Carbon, inorganic, dissolved, standard deviation Bicarbonate ion Bicarbonate ion, standard deviation Carbonate ion Carbonate ion, standard deviation Carbon dioxide Carbon dioxide, standard deviation Alkalinity, total Alkalinity, total, standard deviation Carbonate system computation flag Partial pressure of carbon dioxide water at sea surface temperature wet air Fugacity of carbon dioxide water at sea surface temperature wet air Aragonite saturation state Calcite saturation state Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC Supplementary Dataset dataset Dataset 2012 ftdatacite https://doi.org/10.1594/pangaea.826461 https://doi.org/10.1016/j.marenvres.2012.06.002 2022-02-08T16:27:35Z We studied the effects of elevated CO2 concentration and seawater acidity on inorganic carbon acquisition, photoinhibition and photoprotection as well as growth and respiration in the marine diatom Thalassiosira pseudonana. After having grown under the elevated CO2 level (1000 µatm, pH 7.83) at sub-saturating photosynthetically active radiation (PAR, 75 µmol photons/m**2/s) for 20 generations, photosynthesis and dark respiration of the alga increased by 25% (14.69 ± 2.55 fmol C/cell/h) and by 35% (4.42 ± 0.98 fmol O2/cell/h), respectively, compared to that grown under the ambient CO2 level (390 µatm, pH 8.16), leading to insignificant effects on growth (1.09 ± 0.08 (1/d))v 1.04 ± 0.07 (1/d)). The photosynthetic affinity for CO2 was lowered in the high-CO2 grown cells, reflecting a down-regulation of the CO2 concentrating mechanism (CCM). When exposed to an excessively high level of PAR, photochemical and non-photochemical quenching responded similarly in the low- and high-CO2 grown cells, reflecting that photoinhibition was not influenced by the enriched level of CO2. In T. pseudonana, it appeared that the energy saved due to the down-regulated CCM did not contribute to any additional light stress as previously found in another diatom Phaeodactylum tricornutum, indicating differential physiological responses to ocean acidification between these two diatom species. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2014-01-20. Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology) Pacific