Seawater carbonate chemistry and photosystem II photoinactivation of the coastal diatom Thalassiosira pseudonana in a laboratory experiment, supplement to: Li, Gang; Campbell, Douglas A (2013): Rising CO2 Interacts with Growth Light and Growth Rate to Alter Photosystem II Photoinactivation of the Coastal Diatom Thalassiosira pseudonana. PLoS ONE, 8(1), e55562

We studied the interactive effects of pCO2 and growth light on the coastal marine diatom Thalassiosira pseudonana CCMP 1335 growing under ambient and expected end-of-the-century pCO2 (750 ppmv), and a range of growth light from 30 to 380 µmol photons/m**2/s. Elevated pCO2 significantly stimulated th...

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Bibliographic Details
Main Authors: Li, Gang, Campbell, Douglas A
Format: Dataset
Language:English
Published: PANGAEA - Data Publisher for Earth & Environmental Science 2013
Subjects:
pH
Psi
Online Access:https://dx.doi.org/10.1594/pangaea.824663
https://doi.pangaea.de/10.1594/PANGAEA.824663
id ftdatacite:10.1594/pangaea.824663
record_format openpolar
spelling ftdatacite:10.1594/pangaea.824663 2023-05-15T17:51:21+02:00 Seawater carbonate chemistry and photosystem II photoinactivation of the coastal diatom Thalassiosira pseudonana in a laboratory experiment, supplement to: Li, Gang; Campbell, Douglas A (2013): Rising CO2 Interacts with Growth Light and Growth Rate to Alter Photosystem II Photoinactivation of the Coastal Diatom Thalassiosira pseudonana. PLoS ONE, 8(1), e55562 Li, Gang Campbell, Douglas A 2013 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.824663 https://doi.pangaea.de/10.1594/PANGAEA.824663 en eng PANGAEA - Data Publisher for Earth & Environmental Science https://cran.r-project.org/package=seacarb https://dx.doi.org/10.1371/journal.pone.0055562.t001 https://cran.r-project.org/package=seacarb Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 CC-BY Bottles or small containers/Aquaria <20 L Chromista Growth/Morphology Laboratory experiment Laboratory strains Light Not applicable Ochrophyta Pelagos Phytoplankton Primary production/Photosynthesis Single species Thalassiosira pseudonana Identification Species Treatment Replicates Date Irradiance Time in minutes Cell density Cell biovolume Growth rate Effective absorbance cross-section of photosystem II Photochemical quenching Protein per cell Photosynthetic protein PsbA Photosynthetic protein PsbD Photosynthetic protein Rubisco CF1 subunit of ATP synthase protein Cytochrome c1 Chlorophyll a per cell Carbon, organic, particulate, per cell Nitrogen, organic, particulate, per cell Carbon/Nitrogen ratio Temperature, water Salinity Carbon, inorganic, dissolved pH Partial pressure of carbon dioxide water at sea surface temperature wet air Alkalinity, total Bicarbonate ion Carbonate ion Carbon dioxide Phosphate Silicate Carbonate system computation flag Fugacity of carbon dioxide water at sea surface temperature wet air Aragonite saturation state Calcite saturation state Photospectrometer, methylene blue Element analyser CNS, Elementar Vario EL Potentiometric titration Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC Supplementary Dataset dataset Dataset 2013 ftdatacite https://doi.org/10.1594/pangaea.824663 https://doi.org/10.1371/journal.pone.0055562.t001 2022-02-08T16:27:35Z We studied the interactive effects of pCO2 and growth light on the coastal marine diatom Thalassiosira pseudonana CCMP 1335 growing under ambient and expected end-of-the-century pCO2 (750 ppmv), and a range of growth light from 30 to 380 µmol photons/m**2/s. Elevated pCO2 significantly stimulated the growth of T. pseudonana under sub-saturating growth light, but not under saturating to super-saturating growth light. Under ambient pCO2 susceptibility to photoinactivation of photosystem II (sigma i) increased with increasing growth rate, but cells growing under elevated pCO2 showed no dependence between growth rate and sigma i, so under high growth light cells under elevated pCO2 were less susceptible to photoinactivation of photosystem II, and thus incurred a lower running cost to maintain photosystem II function. Growth light altered the contents of RbcL (RUBISCO) and PsaC (PSI) protein subunits, and the ratios among the subunits, but there were only limited effects on these and other protein pools between cells grown under ambient and elevated pCO2. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2013-12-16. Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology) Psi ENVELOPE(-63.000,-63.000,-64.300,-64.300)
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Bottles or small containers/Aquaria <20 L
Chromista
Growth/Morphology
Laboratory experiment
Laboratory strains
Light
Not applicable
Ochrophyta
Pelagos
Phytoplankton
Primary production/Photosynthesis
Single species
Thalassiosira pseudonana
Identification
Species
Treatment
Replicates
Date
Irradiance
Time in minutes
Cell density
Cell biovolume
Growth rate
Effective absorbance cross-section of photosystem II
Photochemical quenching
Protein per cell
Photosynthetic protein PsbA
Photosynthetic protein PsbD
Photosynthetic protein Rubisco
CF1 subunit of ATP synthase protein
Cytochrome c1
Chlorophyll a per cell
Carbon, organic, particulate, per cell
Nitrogen, organic, particulate, per cell
Carbon/Nitrogen ratio
Temperature, water
Salinity
Carbon, inorganic, dissolved
pH
Partial pressure of carbon dioxide water at sea surface temperature wet air
Alkalinity, total
Bicarbonate ion
Carbonate ion
Carbon dioxide
Phosphate
Silicate
Carbonate system computation flag
Fugacity of carbon dioxide water at sea surface temperature wet air
Aragonite saturation state
Calcite saturation state
Photospectrometer, methylene blue
Element analyser CNS, Elementar Vario EL
Potentiometric titration
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
spellingShingle Bottles or small containers/Aquaria <20 L
Chromista
Growth/Morphology
Laboratory experiment
Laboratory strains
Light
Not applicable
Ochrophyta
Pelagos
Phytoplankton
Primary production/Photosynthesis
Single species
Thalassiosira pseudonana
Identification
Species
Treatment
Replicates
Date
Irradiance
Time in minutes
Cell density
Cell biovolume
Growth rate
Effective absorbance cross-section of photosystem II
Photochemical quenching
Protein per cell
Photosynthetic protein PsbA
Photosynthetic protein PsbD
Photosynthetic protein Rubisco
CF1 subunit of ATP synthase protein
Cytochrome c1
Chlorophyll a per cell
Carbon, organic, particulate, per cell
Nitrogen, organic, particulate, per cell
Carbon/Nitrogen ratio
Temperature, water
Salinity
Carbon, inorganic, dissolved
pH
Partial pressure of carbon dioxide water at sea surface temperature wet air
Alkalinity, total
Bicarbonate ion
Carbonate ion
Carbon dioxide
Phosphate
Silicate
Carbonate system computation flag
Fugacity of carbon dioxide water at sea surface temperature wet air
Aragonite saturation state
Calcite saturation state
Photospectrometer, methylene blue
Element analyser CNS, Elementar Vario EL
Potentiometric titration
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
Li, Gang
Campbell, Douglas A
Seawater carbonate chemistry and photosystem II photoinactivation of the coastal diatom Thalassiosira pseudonana in a laboratory experiment, supplement to: Li, Gang; Campbell, Douglas A (2013): Rising CO2 Interacts with Growth Light and Growth Rate to Alter Photosystem II Photoinactivation of the Coastal Diatom Thalassiosira pseudonana. PLoS ONE, 8(1), e55562
topic_facet Bottles or small containers/Aquaria <20 L
Chromista
Growth/Morphology
Laboratory experiment
Laboratory strains
Light
Not applicable
Ochrophyta
Pelagos
Phytoplankton
Primary production/Photosynthesis
Single species
Thalassiosira pseudonana
Identification
Species
Treatment
Replicates
Date
Irradiance
Time in minutes
Cell density
Cell biovolume
Growth rate
Effective absorbance cross-section of photosystem II
Photochemical quenching
Protein per cell
Photosynthetic protein PsbA
Photosynthetic protein PsbD
Photosynthetic protein Rubisco
CF1 subunit of ATP synthase protein
Cytochrome c1
Chlorophyll a per cell
Carbon, organic, particulate, per cell
Nitrogen, organic, particulate, per cell
Carbon/Nitrogen ratio
Temperature, water
Salinity
Carbon, inorganic, dissolved
pH
Partial pressure of carbon dioxide water at sea surface temperature wet air
Alkalinity, total
Bicarbonate ion
Carbonate ion
Carbon dioxide
Phosphate
Silicate
Carbonate system computation flag
Fugacity of carbon dioxide water at sea surface temperature wet air
Aragonite saturation state
Calcite saturation state
Photospectrometer, methylene blue
Element analyser CNS, Elementar Vario EL
Potentiometric titration
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
description We studied the interactive effects of pCO2 and growth light on the coastal marine diatom Thalassiosira pseudonana CCMP 1335 growing under ambient and expected end-of-the-century pCO2 (750 ppmv), and a range of growth light from 30 to 380 µmol photons/m**2/s. Elevated pCO2 significantly stimulated the growth of T. pseudonana under sub-saturating growth light, but not under saturating to super-saturating growth light. Under ambient pCO2 susceptibility to photoinactivation of photosystem II (sigma i) increased with increasing growth rate, but cells growing under elevated pCO2 showed no dependence between growth rate and sigma i, so under high growth light cells under elevated pCO2 were less susceptible to photoinactivation of photosystem II, and thus incurred a lower running cost to maintain photosystem II function. Growth light altered the contents of RbcL (RUBISCO) and PsaC (PSI) protein subunits, and the ratios among the subunits, but there were only limited effects on these and other protein pools between cells grown under ambient and elevated pCO2. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2013-12-16.
format Dataset
author Li, Gang
Campbell, Douglas A
author_facet Li, Gang
Campbell, Douglas A
author_sort Li, Gang
title Seawater carbonate chemistry and photosystem II photoinactivation of the coastal diatom Thalassiosira pseudonana in a laboratory experiment, supplement to: Li, Gang; Campbell, Douglas A (2013): Rising CO2 Interacts with Growth Light and Growth Rate to Alter Photosystem II Photoinactivation of the Coastal Diatom Thalassiosira pseudonana. PLoS ONE, 8(1), e55562
title_short Seawater carbonate chemistry and photosystem II photoinactivation of the coastal diatom Thalassiosira pseudonana in a laboratory experiment, supplement to: Li, Gang; Campbell, Douglas A (2013): Rising CO2 Interacts with Growth Light and Growth Rate to Alter Photosystem II Photoinactivation of the Coastal Diatom Thalassiosira pseudonana. PLoS ONE, 8(1), e55562
title_full Seawater carbonate chemistry and photosystem II photoinactivation of the coastal diatom Thalassiosira pseudonana in a laboratory experiment, supplement to: Li, Gang; Campbell, Douglas A (2013): Rising CO2 Interacts with Growth Light and Growth Rate to Alter Photosystem II Photoinactivation of the Coastal Diatom Thalassiosira pseudonana. PLoS ONE, 8(1), e55562
title_fullStr Seawater carbonate chemistry and photosystem II photoinactivation of the coastal diatom Thalassiosira pseudonana in a laboratory experiment, supplement to: Li, Gang; Campbell, Douglas A (2013): Rising CO2 Interacts with Growth Light and Growth Rate to Alter Photosystem II Photoinactivation of the Coastal Diatom Thalassiosira pseudonana. PLoS ONE, 8(1), e55562
title_full_unstemmed Seawater carbonate chemistry and photosystem II photoinactivation of the coastal diatom Thalassiosira pseudonana in a laboratory experiment, supplement to: Li, Gang; Campbell, Douglas A (2013): Rising CO2 Interacts with Growth Light and Growth Rate to Alter Photosystem II Photoinactivation of the Coastal Diatom Thalassiosira pseudonana. PLoS ONE, 8(1), e55562
title_sort seawater carbonate chemistry and photosystem ii photoinactivation of the coastal diatom thalassiosira pseudonana in a laboratory experiment, supplement to: li, gang; campbell, douglas a (2013): rising co2 interacts with growth light and growth rate to alter photosystem ii photoinactivation of the coastal diatom thalassiosira pseudonana. plos one, 8(1), e55562
publisher PANGAEA - Data Publisher for Earth & Environmental Science
publishDate 2013
url https://dx.doi.org/10.1594/pangaea.824663
https://doi.pangaea.de/10.1594/PANGAEA.824663
long_lat ENVELOPE(-63.000,-63.000,-64.300,-64.300)
geographic Psi
geographic_facet Psi
genre Ocean acidification
genre_facet Ocean acidification
op_relation https://cran.r-project.org/package=seacarb
https://dx.doi.org/10.1371/journal.pone.0055562.t001
https://cran.r-project.org/package=seacarb
op_rights Creative Commons Attribution 3.0 Unported
https://creativecommons.org/licenses/by/3.0/legalcode
cc-by-3.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.1594/pangaea.824663
https://doi.org/10.1371/journal.pone.0055562.t001
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