Seawater carbonate chemistry and growth, carbon acquisition, and species interaction of Antarctic phytoplankton species in a laboratory experiment ...

Despite the fact that ocean acidification is considered to be especially pronounced in the Southern Ocean, little is known about CO2-dependent physiological processes and the interactions of Antarctic phytoplankton key species. We therefore studied the effects of CO2 partial pressure (PCO2) (16.2, 3...

Full description

Bibliographic Details
Main Authors: Trimborn, Scarlett, Brenneis, Tina, Sweet, Elizabeth, Rost, Björn
Format: Dataset
Language:English
Published: PANGAEA 2013
Subjects:
Online Access:https://dx.doi.org/10.1594/pangaea.824406
https://doi.pangaea.de/10.1594/PANGAEA.824406
id ftdatacite:10.1594/pangaea.824406
record_format openpolar
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Antarctic
Bottles or small containers/Aquaria <20 L
Chaetoceros debilis
Chromista
Fragilariopsis kerguelensis
Growth/Morphology
Laboratory experiment
Laboratory strains
Ochrophyta
Pelagos
Phaeocystis antarctica
Phytoplankton
Primary production/Photosynthesis
Pseudo-nitzschia subcurvata
Single species
Species interaction
Identification
Species
Description
Treatment
Growth rate
Growth rate, standard deviation
Bicarbonate uptake/net fixation ratio
Bicarbonate uptake/net fixation ratio, standard deviation
Extracellular carbonic anhydrase activity
Extracellular carbonic anhydrase activity, standard deviation
Chaetoceros debilis/Pseudo-nitzschia subcurvata ratio
Chaetoceros debilis/Pseudo-nitzschia subcurvata ratio, standard deviation
Gross carbon dioxide uptake/net fixation ratio
Gross carbon dioxide uptake/net fixation ratio, standard deviation
Cell surface area/cell volume ratio
Cell surface area/cell volume, standard deviation
Carbon dioxide, reciprocal of photosynthetic affinity value
Carbon dioxide, reciprocal of photosynthetic affinity value, standard deviation
Photosynthesis carbon dioxide uptake rate, maximum velocity
Photosynthesis carbon dioxide uptake, maximum velocity, standard deviation
Gross carbon dioxide uptake, half saturation concentration
Gross carbon dioxide uptake, half saturation concentration, standard deviation
Gross carbon dioxide uptake rate, per chlorophyll a, maximum velocity
Gross carbon dioxide uptake per chlorophyll a, maximum velocity, standard deviation
Net carbon dioxide uptake, half saturation concentration
Net carbon dioxide uptake, half saturation concentration, standard deviation
Net carbon dioxide uptake rate, per chlorophyll a, maximum velocity
Net carbon dioxide uptake per chlorophyll a, maximum velocity, standard deviation
Bicarbonate ion, reciprocal of photosynthetic affinity value
Bicarbonate ion, reciprocal of photosynthetic affinity value, standard deviation
Bicarbonate uptake rate, per chlorophyll a, maximum velocity
Bicarbonate uptake per chlorophyll a, maximum velocity, standard deviation
Temperature, water
Salinity
spellingShingle Antarctic
Bottles or small containers/Aquaria <20 L
Chaetoceros debilis
Chromista
Fragilariopsis kerguelensis
Growth/Morphology
Laboratory experiment
Laboratory strains
Ochrophyta
Pelagos
Phaeocystis antarctica
Phytoplankton
Primary production/Photosynthesis
Pseudo-nitzschia subcurvata
Single species
Species interaction
Identification
Species
Description
Treatment
Growth rate
Growth rate, standard deviation
Bicarbonate uptake/net fixation ratio
Bicarbonate uptake/net fixation ratio, standard deviation
Extracellular carbonic anhydrase activity
Extracellular carbonic anhydrase activity, standard deviation
Chaetoceros debilis/Pseudo-nitzschia subcurvata ratio
Chaetoceros debilis/Pseudo-nitzschia subcurvata ratio, standard deviation
Gross carbon dioxide uptake/net fixation ratio
Gross carbon dioxide uptake/net fixation ratio, standard deviation
Cell surface area/cell volume ratio
Cell surface area/cell volume, standard deviation
Carbon dioxide, reciprocal of photosynthetic affinity value
Carbon dioxide, reciprocal of photosynthetic affinity value, standard deviation
Photosynthesis carbon dioxide uptake rate, maximum velocity
Photosynthesis carbon dioxide uptake, maximum velocity, standard deviation
Gross carbon dioxide uptake, half saturation concentration
Gross carbon dioxide uptake, half saturation concentration, standard deviation
Gross carbon dioxide uptake rate, per chlorophyll a, maximum velocity
Gross carbon dioxide uptake per chlorophyll a, maximum velocity, standard deviation
Net carbon dioxide uptake, half saturation concentration
Net carbon dioxide uptake, half saturation concentration, standard deviation
Net carbon dioxide uptake rate, per chlorophyll a, maximum velocity
Net carbon dioxide uptake per chlorophyll a, maximum velocity, standard deviation
Bicarbonate ion, reciprocal of photosynthetic affinity value
Bicarbonate ion, reciprocal of photosynthetic affinity value, standard deviation
Bicarbonate uptake rate, per chlorophyll a, maximum velocity
Bicarbonate uptake per chlorophyll a, maximum velocity, standard deviation
Temperature, water
Salinity
Trimborn, Scarlett
Brenneis, Tina
Sweet, Elizabeth
Rost, Björn
Seawater carbonate chemistry and growth, carbon acquisition, and species interaction of Antarctic phytoplankton species in a laboratory experiment ...
topic_facet Antarctic
Bottles or small containers/Aquaria <20 L
Chaetoceros debilis
Chromista
Fragilariopsis kerguelensis
Growth/Morphology
Laboratory experiment
Laboratory strains
Ochrophyta
Pelagos
Phaeocystis antarctica
Phytoplankton
Primary production/Photosynthesis
Pseudo-nitzschia subcurvata
Single species
Species interaction
Identification
Species
Description
Treatment
Growth rate
Growth rate, standard deviation
Bicarbonate uptake/net fixation ratio
Bicarbonate uptake/net fixation ratio, standard deviation
Extracellular carbonic anhydrase activity
Extracellular carbonic anhydrase activity, standard deviation
Chaetoceros debilis/Pseudo-nitzschia subcurvata ratio
Chaetoceros debilis/Pseudo-nitzschia subcurvata ratio, standard deviation
Gross carbon dioxide uptake/net fixation ratio
Gross carbon dioxide uptake/net fixation ratio, standard deviation
Cell surface area/cell volume ratio
Cell surface area/cell volume, standard deviation
Carbon dioxide, reciprocal of photosynthetic affinity value
Carbon dioxide, reciprocal of photosynthetic affinity value, standard deviation
Photosynthesis carbon dioxide uptake rate, maximum velocity
Photosynthesis carbon dioxide uptake, maximum velocity, standard deviation
Gross carbon dioxide uptake, half saturation concentration
Gross carbon dioxide uptake, half saturation concentration, standard deviation
Gross carbon dioxide uptake rate, per chlorophyll a, maximum velocity
Gross carbon dioxide uptake per chlorophyll a, maximum velocity, standard deviation
Net carbon dioxide uptake, half saturation concentration
Net carbon dioxide uptake, half saturation concentration, standard deviation
Net carbon dioxide uptake rate, per chlorophyll a, maximum velocity
Net carbon dioxide uptake per chlorophyll a, maximum velocity, standard deviation
Bicarbonate ion, reciprocal of photosynthetic affinity value
Bicarbonate ion, reciprocal of photosynthetic affinity value, standard deviation
Bicarbonate uptake rate, per chlorophyll a, maximum velocity
Bicarbonate uptake per chlorophyll a, maximum velocity, standard deviation
Temperature, water
Salinity
description Despite the fact that ocean acidification is considered to be especially pronounced in the Southern Ocean, little is known about CO2-dependent physiological processes and the interactions of Antarctic phytoplankton key species. We therefore studied the effects of CO2 partial pressure (PCO2) (16.2, 39.5, and 101.3 Pa) on growth and photosynthetic carbon acquisition in the bloom-forming species Chaetoceros debilis, Pseudo-nitzschia subcurvata, Fragilariopsis kerguelensis, and Phaeocystis antarctica. Using membrane-inlet mass spectrometry, photosynthetic O2 evolution and inorganic carbon (Ci) fluxes were determined as a function of CO2 concentration. Only the growth of C. debilis was enhanced under high PCO2. Analysis of the carbon concentrating mechanism (CCM) revealed the operation of very efficient CCMs (i.e., high Ci affinities) in all species, but there were species-specific differences in CO2-dependent regulation of individual CCM components (i.e., CO2 and uptake kinetics, carbonic anhydrase activities). ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2013-12-10. ...
format Dataset
author Trimborn, Scarlett
Brenneis, Tina
Sweet, Elizabeth
Rost, Björn
author_facet Trimborn, Scarlett
Brenneis, Tina
Sweet, Elizabeth
Rost, Björn
author_sort Trimborn, Scarlett
title Seawater carbonate chemistry and growth, carbon acquisition, and species interaction of Antarctic phytoplankton species in a laboratory experiment ...
title_short Seawater carbonate chemistry and growth, carbon acquisition, and species interaction of Antarctic phytoplankton species in a laboratory experiment ...
title_full Seawater carbonate chemistry and growth, carbon acquisition, and species interaction of Antarctic phytoplankton species in a laboratory experiment ...
title_fullStr Seawater carbonate chemistry and growth, carbon acquisition, and species interaction of Antarctic phytoplankton species in a laboratory experiment ...
title_full_unstemmed Seawater carbonate chemistry and growth, carbon acquisition, and species interaction of Antarctic phytoplankton species in a laboratory experiment ...
title_sort seawater carbonate chemistry and growth, carbon acquisition, and species interaction of antarctic phytoplankton species in a laboratory experiment ...
publisher PANGAEA
publishDate 2013
url https://dx.doi.org/10.1594/pangaea.824406
https://doi.pangaea.de/10.1594/PANGAEA.824406
geographic Antarctic
Southern Ocean
geographic_facet Antarctic
Southern Ocean
genre Antarc*
Antarctic
Antarctica
Ocean acidification
Southern Ocean
genre_facet Antarc*
Antarctic
Antarctica
Ocean acidification
Southern Ocean
op_relation https://cran.r-project.org/package=seacarb
https://dx.doi.org/10.4319/lo.2013.58.3.0997
https://cran.r-project.org/package=seacarb
op_rights Creative Commons Attribution 3.0 Unported
https://creativecommons.org/licenses/by/3.0/legalcode
cc-by-3.0
op_doi https://doi.org/10.1594/pangaea.82440610.4319/lo.2013.58.3.0997
_version_ 1778517947541618688
spelling ftdatacite:10.1594/pangaea.824406 2023-10-01T03:52:12+02:00 Seawater carbonate chemistry and growth, carbon acquisition, and species interaction of Antarctic phytoplankton species in a laboratory experiment ... Trimborn, Scarlett Brenneis, Tina Sweet, Elizabeth Rost, Björn 2013 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.824406 https://doi.pangaea.de/10.1594/PANGAEA.824406 en eng PANGAEA https://cran.r-project.org/package=seacarb https://dx.doi.org/10.4319/lo.2013.58.3.0997 https://cran.r-project.org/package=seacarb Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 Antarctic Bottles or small containers/Aquaria <20 L Chaetoceros debilis Chromista Fragilariopsis kerguelensis Growth/Morphology Laboratory experiment Laboratory strains Ochrophyta Pelagos Phaeocystis antarctica Phytoplankton Primary production/Photosynthesis Pseudo-nitzschia subcurvata Single species Species interaction Identification Species Description Treatment Growth rate Growth rate, standard deviation Bicarbonate uptake/net fixation ratio Bicarbonate uptake/net fixation ratio, standard deviation Extracellular carbonic anhydrase activity Extracellular carbonic anhydrase activity, standard deviation Chaetoceros debilis/Pseudo-nitzschia subcurvata ratio Chaetoceros debilis/Pseudo-nitzschia subcurvata ratio, standard deviation Gross carbon dioxide uptake/net fixation ratio Gross carbon dioxide uptake/net fixation ratio, standard deviation Cell surface area/cell volume ratio Cell surface area/cell volume, standard deviation Carbon dioxide, reciprocal of photosynthetic affinity value Carbon dioxide, reciprocal of photosynthetic affinity value, standard deviation Photosynthesis carbon dioxide uptake rate, maximum velocity Photosynthesis carbon dioxide uptake, maximum velocity, standard deviation Gross carbon dioxide uptake, half saturation concentration Gross carbon dioxide uptake, half saturation concentration, standard deviation Gross carbon dioxide uptake rate, per chlorophyll a, maximum velocity Gross carbon dioxide uptake per chlorophyll a, maximum velocity, standard deviation Net carbon dioxide uptake, half saturation concentration Net carbon dioxide uptake, half saturation concentration, standard deviation Net carbon dioxide uptake rate, per chlorophyll a, maximum velocity Net carbon dioxide uptake per chlorophyll a, maximum velocity, standard deviation Bicarbonate ion, reciprocal of photosynthetic affinity value Bicarbonate ion, reciprocal of photosynthetic affinity value, standard deviation Bicarbonate uptake rate, per chlorophyll a, maximum velocity Bicarbonate uptake per chlorophyll a, maximum velocity, standard deviation Temperature, water Salinity Dataset Supplementary Dataset dataset 2013 ftdatacite https://doi.org/10.1594/pangaea.82440610.4319/lo.2013.58.3.0997 2023-09-04T14:52:34Z Despite the fact that ocean acidification is considered to be especially pronounced in the Southern Ocean, little is known about CO2-dependent physiological processes and the interactions of Antarctic phytoplankton key species. We therefore studied the effects of CO2 partial pressure (PCO2) (16.2, 39.5, and 101.3 Pa) on growth and photosynthetic carbon acquisition in the bloom-forming species Chaetoceros debilis, Pseudo-nitzschia subcurvata, Fragilariopsis kerguelensis, and Phaeocystis antarctica. Using membrane-inlet mass spectrometry, photosynthetic O2 evolution and inorganic carbon (Ci) fluxes were determined as a function of CO2 concentration. Only the growth of C. debilis was enhanced under high PCO2. Analysis of the carbon concentrating mechanism (CCM) revealed the operation of very efficient CCMs (i.e., high Ci affinities) in all species, but there were species-specific differences in CO2-dependent regulation of individual CCM components (i.e., CO2 and uptake kinetics, carbonic anhydrase activities). ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2013-12-10. ... Dataset Antarc* Antarctic Antarctica Ocean acidification Southern Ocean DataCite Metadata Store (German National Library of Science and Technology) Antarctic Southern Ocean