Seawater carbonate chemistry and growth rate of Emiliania huxleyi in lab experiment, supplement to: Lohbeck, Kai T; Riebesell, Ulf; Collins, Sinéad; Reusch, Thorsten B H (2013): Functional genetic divergence in high CO2 adapted Emiliania Huxleyi populations. Evolution, 67(7), 1892-1900

Predicting the impacts of environmental change on marine organisms, food webs, and biogeochemical cycles presently relies almost exclusively on short-term physiological studies, while the possibility of adaptive evolution is often ignored. Here, we assess adaptive evolution in the coccolithophore Em...

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Main Authors: Lohbeck, Kai T, Riebesell, Ulf, Collins, Sinéad, Reusch, Thorsten B H
Format: Dataset
Language:English
Published: PANGAEA - Data Publisher for Earth & Environmental Science 2013
Subjects:
pH
Online Access:https://dx.doi.org/10.1594/pangaea.823153
https://doi.pangaea.de/10.1594/PANGAEA.823153
id ftdatacite:10.1594/pangaea.823153
record_format openpolar
spelling ftdatacite:10.1594/pangaea.823153 2023-05-15T17:37:14+02:00 Seawater carbonate chemistry and growth rate of Emiliania huxleyi in lab experiment, supplement to: Lohbeck, Kai T; Riebesell, Ulf; Collins, Sinéad; Reusch, Thorsten B H (2013): Functional genetic divergence in high CO2 adapted Emiliania Huxleyi populations. Evolution, 67(7), 1892-1900 Lohbeck, Kai T Riebesell, Ulf Collins, Sinéad Reusch, Thorsten B H 2013 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.823153 https://doi.pangaea.de/10.1594/PANGAEA.823153 en eng PANGAEA - Data Publisher for Earth & Environmental Science https://cran.r-project.org/package=seacarb https://dx.doi.org/10.1111/j.1558-5646.2012.01812.x https://cran.r-project.org/package=seacarb Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 CC-BY Bottles or small containers/Aquaria <20 L Emiliania huxleyi Growth/Morphology Haptophyta Laboratory experiment Laboratory strains Light North Atlantic Pelagos Phytoplankton Salinity Single species Species Treatment Generation Partial pressure of carbon dioxide water at sea surface temperature wet air Population Replicates Growth rate Temperature, water Alkalinity, total Carbon, inorganic, dissolved pH Fugacity of carbon dioxide water at sea surface temperature wet air Carbonate system computation flag Carbon dioxide Bicarbonate ion Carbonate ion Aragonite saturation state Calcite saturation state Potentiometric titration Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. 2010 Biological Impacts of Ocean Acidification BIOACID Ocean Acidification International Coordination Centre OA-ICC Dataset dataset Supplementary Dataset 2013 ftdatacite https://doi.org/10.1594/pangaea.823153 https://doi.org/10.1111/j.1558-5646.2012.01812.x 2022-02-09T13:11:39Z Predicting the impacts of environmental change on marine organisms, food webs, and biogeochemical cycles presently relies almost exclusively on short-term physiological studies, while the possibility of adaptive evolution is often ignored. Here, we assess adaptive evolution in the coccolithophore Emiliania huxleyi, a well-established model species in biological oceanography, in response to ocean acidification. We previously demonstrated that this globally important marine phytoplankton species adapts within 500 generations to elevated CO2. After 750 and 1000 generations, no further fitness increase occurred, and we observed phenotypic convergence between replicate populations. We then exposed adapted populations to two novel environments to investigate whether or not the underlying basis for high CO2-adaptation involves functional genetic divergence, assuming that different novel mutations become apparent via divergent pleiotropic effects. The novel environment "high light" did not reveal such genetic divergence whereas growth in a low-salinity environment revealed strong pleiotropic effects in high CO2 adapted populations, indicating divergent genetic bases for adaptation to high CO2. This suggests that pleiotropy plays an important role in adaptation of natural E. huxleyi populations to ocean acidification. Our study highlights the potential mutual benefits for oceanography and evolutionary biology of using ecologically important marine phytoplankton for microbial evolution experiments. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2013-11-28. Dataset North Atlantic Ocean acidification DataCite Metadata Store (German National Library of Science and Technology)
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Bottles or small containers/Aquaria <20 L
Emiliania huxleyi
Growth/Morphology
Haptophyta
Laboratory experiment
Laboratory strains
Light
North Atlantic
Pelagos
Phytoplankton
Salinity
Single species
Species
Treatment
Generation
Partial pressure of carbon dioxide water at sea surface temperature wet air
Population
Replicates
Growth rate
Temperature, water
Alkalinity, total
Carbon, inorganic, dissolved
pH
Fugacity of carbon dioxide water at sea surface temperature wet air
Carbonate system computation flag
Carbon dioxide
Bicarbonate ion
Carbonate ion
Aragonite saturation state
Calcite saturation state
Potentiometric titration
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. 2010
Biological Impacts of Ocean Acidification BIOACID
Ocean Acidification International Coordination Centre OA-ICC
spellingShingle Bottles or small containers/Aquaria <20 L
Emiliania huxleyi
Growth/Morphology
Haptophyta
Laboratory experiment
Laboratory strains
Light
North Atlantic
Pelagos
Phytoplankton
Salinity
Single species
Species
Treatment
Generation
Partial pressure of carbon dioxide water at sea surface temperature wet air
Population
Replicates
Growth rate
Temperature, water
Alkalinity, total
Carbon, inorganic, dissolved
pH
Fugacity of carbon dioxide water at sea surface temperature wet air
Carbonate system computation flag
Carbon dioxide
Bicarbonate ion
Carbonate ion
Aragonite saturation state
Calcite saturation state
Potentiometric titration
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. 2010
Biological Impacts of Ocean Acidification BIOACID
Ocean Acidification International Coordination Centre OA-ICC
Lohbeck, Kai T
Riebesell, Ulf
Collins, Sinéad
Reusch, Thorsten B H
Seawater carbonate chemistry and growth rate of Emiliania huxleyi in lab experiment, supplement to: Lohbeck, Kai T; Riebesell, Ulf; Collins, Sinéad; Reusch, Thorsten B H (2013): Functional genetic divergence in high CO2 adapted Emiliania Huxleyi populations. Evolution, 67(7), 1892-1900
topic_facet Bottles or small containers/Aquaria <20 L
Emiliania huxleyi
Growth/Morphology
Haptophyta
Laboratory experiment
Laboratory strains
Light
North Atlantic
Pelagos
Phytoplankton
Salinity
Single species
Species
Treatment
Generation
Partial pressure of carbon dioxide water at sea surface temperature wet air
Population
Replicates
Growth rate
Temperature, water
Alkalinity, total
Carbon, inorganic, dissolved
pH
Fugacity of carbon dioxide water at sea surface temperature wet air
Carbonate system computation flag
Carbon dioxide
Bicarbonate ion
Carbonate ion
Aragonite saturation state
Calcite saturation state
Potentiometric titration
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. 2010
Biological Impacts of Ocean Acidification BIOACID
Ocean Acidification International Coordination Centre OA-ICC
description Predicting the impacts of environmental change on marine organisms, food webs, and biogeochemical cycles presently relies almost exclusively on short-term physiological studies, while the possibility of adaptive evolution is often ignored. Here, we assess adaptive evolution in the coccolithophore Emiliania huxleyi, a well-established model species in biological oceanography, in response to ocean acidification. We previously demonstrated that this globally important marine phytoplankton species adapts within 500 generations to elevated CO2. After 750 and 1000 generations, no further fitness increase occurred, and we observed phenotypic convergence between replicate populations. We then exposed adapted populations to two novel environments to investigate whether or not the underlying basis for high CO2-adaptation involves functional genetic divergence, assuming that different novel mutations become apparent via divergent pleiotropic effects. The novel environment "high light" did not reveal such genetic divergence whereas growth in a low-salinity environment revealed strong pleiotropic effects in high CO2 adapted populations, indicating divergent genetic bases for adaptation to high CO2. This suggests that pleiotropy plays an important role in adaptation of natural E. huxleyi populations to ocean acidification. Our study highlights the potential mutual benefits for oceanography and evolutionary biology of using ecologically important marine phytoplankton for microbial evolution experiments. : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2013-11-28.
format Dataset
author Lohbeck, Kai T
Riebesell, Ulf
Collins, Sinéad
Reusch, Thorsten B H
author_facet Lohbeck, Kai T
Riebesell, Ulf
Collins, Sinéad
Reusch, Thorsten B H
author_sort Lohbeck, Kai T
title Seawater carbonate chemistry and growth rate of Emiliania huxleyi in lab experiment, supplement to: Lohbeck, Kai T; Riebesell, Ulf; Collins, Sinéad; Reusch, Thorsten B H (2013): Functional genetic divergence in high CO2 adapted Emiliania Huxleyi populations. Evolution, 67(7), 1892-1900
title_short Seawater carbonate chemistry and growth rate of Emiliania huxleyi in lab experiment, supplement to: Lohbeck, Kai T; Riebesell, Ulf; Collins, Sinéad; Reusch, Thorsten B H (2013): Functional genetic divergence in high CO2 adapted Emiliania Huxleyi populations. Evolution, 67(7), 1892-1900
title_full Seawater carbonate chemistry and growth rate of Emiliania huxleyi in lab experiment, supplement to: Lohbeck, Kai T; Riebesell, Ulf; Collins, Sinéad; Reusch, Thorsten B H (2013): Functional genetic divergence in high CO2 adapted Emiliania Huxleyi populations. Evolution, 67(7), 1892-1900
title_fullStr Seawater carbonate chemistry and growth rate of Emiliania huxleyi in lab experiment, supplement to: Lohbeck, Kai T; Riebesell, Ulf; Collins, Sinéad; Reusch, Thorsten B H (2013): Functional genetic divergence in high CO2 adapted Emiliania Huxleyi populations. Evolution, 67(7), 1892-1900
title_full_unstemmed Seawater carbonate chemistry and growth rate of Emiliania huxleyi in lab experiment, supplement to: Lohbeck, Kai T; Riebesell, Ulf; Collins, Sinéad; Reusch, Thorsten B H (2013): Functional genetic divergence in high CO2 adapted Emiliania Huxleyi populations. Evolution, 67(7), 1892-1900
title_sort seawater carbonate chemistry and growth rate of emiliania huxleyi in lab experiment, supplement to: lohbeck, kai t; riebesell, ulf; collins, sinéad; reusch, thorsten b h (2013): functional genetic divergence in high co2 adapted emiliania huxleyi populations. evolution, 67(7), 1892-1900
publisher PANGAEA - Data Publisher for Earth & Environmental Science
publishDate 2013
url https://dx.doi.org/10.1594/pangaea.823153
https://doi.pangaea.de/10.1594/PANGAEA.823153
genre North Atlantic
Ocean acidification
genre_facet North Atlantic
Ocean acidification
op_relation https://cran.r-project.org/package=seacarb
https://dx.doi.org/10.1111/j.1558-5646.2012.01812.x
https://cran.r-project.org/package=seacarb
op_rights Creative Commons Attribution 3.0 Unported
https://creativecommons.org/licenses/by/3.0/legalcode
cc-by-3.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.1594/pangaea.823153
https://doi.org/10.1111/j.1558-5646.2012.01812.x
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