Interactive effects of ocean acidification and nitrogen limitation on the diatom Phaeodactylum tricornutum ...
Climate change is expected to bring about alterations in the marine physical and chemical environment that will induce changes in the concentration of dissolved CO2 and in nutrient availability. These in turn are expected to affect the physiological performance of phytoplankton. In order to learn ho...
Main Authors: | , , |
---|---|
Format: | Dataset |
Language: | English |
Published: |
PANGAEA
2012
|
Subjects: | |
Online Access: | https://dx.doi.org/10.1594/pangaea.823110 https://doi.pangaea.de/10.1594/PANGAEA.823110 |
id |
ftdatacite:10.1594/pangaea.823110 |
---|---|
record_format |
openpolar |
spelling |
ftdatacite:10.1594/pangaea.823110 2024-09-09T20:01:31+00:00 Interactive effects of ocean acidification and nitrogen limitation on the diatom Phaeodactylum tricornutum ... Li, Wei Gao, Kunshan Beardall, John 2012 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.823110 https://doi.pangaea.de/10.1594/PANGAEA.823110 en eng PANGAEA https://cran.r-project.org/package=seacarb https://dx.doi.org/10.1371/journal.pone.0051590 https://cran.r-project.org/package=seacarb Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 Bottles or small containers/Aquaria <20 L Chromista Growth/Morphology Laboratory experiment Laboratory strains Macro-nutrients North Pacific Ochrophyta Phaeodactylum tricornutum Phytoplankton Primary production/Photosynthesis Respiration Single species Species Identification Treatment Growth rate Growth rate, standard deviation Chlorophyll a per cell Chlorophyll a, standard deviation Carotenoids per cell Carotenoids, standard deviation Chlorophyll c per cell Chlorophyll c, standard deviation Cell size Cell counts, percent of total Cell counts, standard deviation Maximum photochemical quantum yield of photosystem II Maximum photochemical quantum yield of photosystem II, standard deviation Effective quantum yield Effective quantum yield, standard deviation Cell size, standard deviation Cell biovolume Cell biovolume, standard deviation Maximal electron transport rate, relative Maximal electron transport rate, relative, standard deviation Carbon, inorganic, dissolved, reciprocal of photosynthetic affinity value Carbon, inorganic, dissolved, reciprocal of photosynthetic affinity value, standard deviation Carbon dioxide, reciprocal of photosynthetic affinity value Carbon dioxide, reciprocal of photosynthetic affinity value, standard deviation Carbon, inorganic, dissolved Photochemical efficiency Photochemical efficiency, standard deviation Respiration rate, oxygen, per cell Respiration rate, oxygen, standard deviation Respiration rate, oxygen, per chlorophyll a Carbon, organic, particulate, per cell Particulate organic carbon content per cell, standard deviation Nitrogen, organic, particulate, per cell Particulate organic nitrogen per cell, standard deviation dataset Supplementary Dataset Dataset 2012 ftdatacite https://doi.org/10.1594/pangaea.82311010.1371/journal.pone.0051590 2024-06-17T10:47:13Z Climate change is expected to bring about alterations in the marine physical and chemical environment that will induce changes in the concentration of dissolved CO2 and in nutrient availability. These in turn are expected to affect the physiological performance of phytoplankton. In order to learn how phytoplankton respond to the predicted scenario of increased CO2 and decreased nitrogen in the surface mixed layer, we investigated the diatom Phaeodactylum tricornutum as a model organism. The cells were cultured in both low CO2 (390 µatm) and high CO2 (1000 µatm) conditions at limiting (10 µmol/L) or enriched (110 µmol/L) nitrate concentrations. Our study shows that nitrogen limitation resulted in significant decreases in cell size, pigmentation, growth rate and effective quantum yield of Phaeodactylum tricornutum, but these parameters were not affected by enhanced dissolved CO2 and lowered pH. However, increased CO2 concentration induced higher rETRmax and higher dark respiration rates and decreased the CO2 ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2013-11-20. ... Dataset Ocean acidification DataCite Pacific |
institution |
Open Polar |
collection |
DataCite |
op_collection_id |
ftdatacite |
language |
English |
topic |
Bottles or small containers/Aquaria <20 L Chromista Growth/Morphology Laboratory experiment Laboratory strains Macro-nutrients North Pacific Ochrophyta Phaeodactylum tricornutum Phytoplankton Primary production/Photosynthesis Respiration Single species Species Identification Treatment Growth rate Growth rate, standard deviation Chlorophyll a per cell Chlorophyll a, standard deviation Carotenoids per cell Carotenoids, standard deviation Chlorophyll c per cell Chlorophyll c, standard deviation Cell size Cell counts, percent of total Cell counts, standard deviation Maximum photochemical quantum yield of photosystem II Maximum photochemical quantum yield of photosystem II, standard deviation Effective quantum yield Effective quantum yield, standard deviation Cell size, standard deviation Cell biovolume Cell biovolume, standard deviation Maximal electron transport rate, relative Maximal electron transport rate, relative, standard deviation Carbon, inorganic, dissolved, reciprocal of photosynthetic affinity value Carbon, inorganic, dissolved, reciprocal of photosynthetic affinity value, standard deviation Carbon dioxide, reciprocal of photosynthetic affinity value Carbon dioxide, reciprocal of photosynthetic affinity value, standard deviation Carbon, inorganic, dissolved Photochemical efficiency Photochemical efficiency, standard deviation Respiration rate, oxygen, per cell Respiration rate, oxygen, standard deviation Respiration rate, oxygen, per chlorophyll a Carbon, organic, particulate, per cell Particulate organic carbon content per cell, standard deviation Nitrogen, organic, particulate, per cell Particulate organic nitrogen per cell, standard deviation |
spellingShingle |
Bottles or small containers/Aquaria <20 L Chromista Growth/Morphology Laboratory experiment Laboratory strains Macro-nutrients North Pacific Ochrophyta Phaeodactylum tricornutum Phytoplankton Primary production/Photosynthesis Respiration Single species Species Identification Treatment Growth rate Growth rate, standard deviation Chlorophyll a per cell Chlorophyll a, standard deviation Carotenoids per cell Carotenoids, standard deviation Chlorophyll c per cell Chlorophyll c, standard deviation Cell size Cell counts, percent of total Cell counts, standard deviation Maximum photochemical quantum yield of photosystem II Maximum photochemical quantum yield of photosystem II, standard deviation Effective quantum yield Effective quantum yield, standard deviation Cell size, standard deviation Cell biovolume Cell biovolume, standard deviation Maximal electron transport rate, relative Maximal electron transport rate, relative, standard deviation Carbon, inorganic, dissolved, reciprocal of photosynthetic affinity value Carbon, inorganic, dissolved, reciprocal of photosynthetic affinity value, standard deviation Carbon dioxide, reciprocal of photosynthetic affinity value Carbon dioxide, reciprocal of photosynthetic affinity value, standard deviation Carbon, inorganic, dissolved Photochemical efficiency Photochemical efficiency, standard deviation Respiration rate, oxygen, per cell Respiration rate, oxygen, standard deviation Respiration rate, oxygen, per chlorophyll a Carbon, organic, particulate, per cell Particulate organic carbon content per cell, standard deviation Nitrogen, organic, particulate, per cell Particulate organic nitrogen per cell, standard deviation Li, Wei Gao, Kunshan Beardall, John Interactive effects of ocean acidification and nitrogen limitation on the diatom Phaeodactylum tricornutum ... |
topic_facet |
Bottles or small containers/Aquaria <20 L Chromista Growth/Morphology Laboratory experiment Laboratory strains Macro-nutrients North Pacific Ochrophyta Phaeodactylum tricornutum Phytoplankton Primary production/Photosynthesis Respiration Single species Species Identification Treatment Growth rate Growth rate, standard deviation Chlorophyll a per cell Chlorophyll a, standard deviation Carotenoids per cell Carotenoids, standard deviation Chlorophyll c per cell Chlorophyll c, standard deviation Cell size Cell counts, percent of total Cell counts, standard deviation Maximum photochemical quantum yield of photosystem II Maximum photochemical quantum yield of photosystem II, standard deviation Effective quantum yield Effective quantum yield, standard deviation Cell size, standard deviation Cell biovolume Cell biovolume, standard deviation Maximal electron transport rate, relative Maximal electron transport rate, relative, standard deviation Carbon, inorganic, dissolved, reciprocal of photosynthetic affinity value Carbon, inorganic, dissolved, reciprocal of photosynthetic affinity value, standard deviation Carbon dioxide, reciprocal of photosynthetic affinity value Carbon dioxide, reciprocal of photosynthetic affinity value, standard deviation Carbon, inorganic, dissolved Photochemical efficiency Photochemical efficiency, standard deviation Respiration rate, oxygen, per cell Respiration rate, oxygen, standard deviation Respiration rate, oxygen, per chlorophyll a Carbon, organic, particulate, per cell Particulate organic carbon content per cell, standard deviation Nitrogen, organic, particulate, per cell Particulate organic nitrogen per cell, standard deviation |
description |
Climate change is expected to bring about alterations in the marine physical and chemical environment that will induce changes in the concentration of dissolved CO2 and in nutrient availability. These in turn are expected to affect the physiological performance of phytoplankton. In order to learn how phytoplankton respond to the predicted scenario of increased CO2 and decreased nitrogen in the surface mixed layer, we investigated the diatom Phaeodactylum tricornutum as a model organism. The cells were cultured in both low CO2 (390 µatm) and high CO2 (1000 µatm) conditions at limiting (10 µmol/L) or enriched (110 µmol/L) nitrate concentrations. Our study shows that nitrogen limitation resulted in significant decreases in cell size, pigmentation, growth rate and effective quantum yield of Phaeodactylum tricornutum, but these parameters were not affected by enhanced dissolved CO2 and lowered pH. However, increased CO2 concentration induced higher rETRmax and higher dark respiration rates and decreased the CO2 ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2013-11-20. ... |
format |
Dataset |
author |
Li, Wei Gao, Kunshan Beardall, John |
author_facet |
Li, Wei Gao, Kunshan Beardall, John |
author_sort |
Li, Wei |
title |
Interactive effects of ocean acidification and nitrogen limitation on the diatom Phaeodactylum tricornutum ... |
title_short |
Interactive effects of ocean acidification and nitrogen limitation on the diatom Phaeodactylum tricornutum ... |
title_full |
Interactive effects of ocean acidification and nitrogen limitation on the diatom Phaeodactylum tricornutum ... |
title_fullStr |
Interactive effects of ocean acidification and nitrogen limitation on the diatom Phaeodactylum tricornutum ... |
title_full_unstemmed |
Interactive effects of ocean acidification and nitrogen limitation on the diatom Phaeodactylum tricornutum ... |
title_sort |
interactive effects of ocean acidification and nitrogen limitation on the diatom phaeodactylum tricornutum ... |
publisher |
PANGAEA |
publishDate |
2012 |
url |
https://dx.doi.org/10.1594/pangaea.823110 https://doi.pangaea.de/10.1594/PANGAEA.823110 |
geographic |
Pacific |
geographic_facet |
Pacific |
genre |
Ocean acidification |
genre_facet |
Ocean acidification |
op_relation |
https://cran.r-project.org/package=seacarb https://dx.doi.org/10.1371/journal.pone.0051590 https://cran.r-project.org/package=seacarb |
op_rights |
Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 |
op_doi |
https://doi.org/10.1594/pangaea.82311010.1371/journal.pone.0051590 |
_version_ |
1809933390499020800 |