Ocean acidification mediates photosynthetic response to UV radiation and temperature increase in the diatom Phaeodactylum tricornutum ...

Increasing atmospheric CO2 concentration is responsible for progressive ocean acidification, ocean warming as well as decreased thickness of upper mixing layer (UML), thus exposing phytoplankton cells not only to lower pH and higher temperatures but also to higher levels of solar UV radiation. In or...

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Main Authors: Li, Yahe, Gao, Kunshan, Villafañe, Virginia E, Helbling, E Walter
Format: Dataset
Language:English
Published: PANGAEA 2012
Subjects:
pH
Online Access:https://dx.doi.org/10.1594/pangaea.823078
https://doi.pangaea.de/10.1594/PANGAEA.823078
id ftdatacite:10.1594/pangaea.823078
record_format openpolar
spelling ftdatacite:10.1594/pangaea.823078 2024-09-30T14:40:42+00:00 Ocean acidification mediates photosynthetic response to UV radiation and temperature increase in the diatom Phaeodactylum tricornutum ... Li, Yahe Gao, Kunshan Villafañe, Virginia E Helbling, E Walter 2012 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.823078 https://doi.pangaea.de/10.1594/PANGAEA.823078 en eng PANGAEA https://cran.r-project.org/package=seacarb https://dx.doi.org/10.5194/bg-9-3931-2012 https://cran.r-project.org/package=seacarb Creative Commons Attribution 3.0 Unported https://creativecommons.org/licenses/by/3.0/legalcode cc-by-3.0 Bottles or small containers/Aquaria <20 L Chromista Laboratory experiment Laboratory strains Light North Pacific Ochrophyta Pelagos Phaeodactylum tricornutum Primary production/Photosynthesis Single species Temperature Species Identification Temperature, water Treatment Time in minutes Effective quantum yield Damage rate Damage rate, standard deviation Repair rate Repair rate, standard deviation Non photochemical quenching Non photochemical quenching, standard deviation Damage/repair ratio Damage/repair ratio, standard deviation Net photosynthesis rate, per cell Net photosynthesis rate, standard deviation Ultraviolet radiation-induced inhibition of photosynthesis Ultraviolet radiation-induced inhibition of photosynthesis, standard deviation Salinity Partial pressure of carbon dioxide water at sea surface temperature wet air pH pH, standard deviation Carbon, inorganic, dissolved Carbon, inorganic, dissolved, standard deviation Bicarbonate ion Bicarbonate ion, standard deviation Carbonate ion Carbonate ion, standard deviation Carbon dioxide Alkalinity, total Alkalinity, total, standard deviation Carbonate system computation flag Fugacity of carbon dioxide water at sea surface temperature wet air Aragonite saturation state Calcite saturation state Potentiometric Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. 2010 Supplementary Dataset Dataset dataset 2012 ftdatacite https://doi.org/10.1594/pangaea.82307810.5194/bg-9-3931-2012 2024-09-02T07:58:08Z Increasing atmospheric CO2 concentration is responsible for progressive ocean acidification, ocean warming as well as decreased thickness of upper mixing layer (UML), thus exposing phytoplankton cells not only to lower pH and higher temperatures but also to higher levels of solar UV radiation. In order to evaluate the combined effects of ocean acidification, UV radiation and temperature, we used the diatom Phaeodactylum tricornutum as a model organism and examined its physiological performance after grown under two CO2 concentrations (390 and 1000 µatm) for more than 20 generations. Compared to the ambient CO2 level (390 µatm), growth at the elevated CO2 concentration increased non-photochemical quenching (NPQ) of cells and partially counteracted the harm to PS II (photosystem II) caused by UV-A and UV-B. Such an effect was less pronounced under increased temperature levels. The ratio of repair to UV-B induced damage decreased with increased NPQ, reflecting induction of NPQ when repair dropped behind the ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2013-11-15. ... Dataset Ocean acidification DataCite Pacific
institution Open Polar
collection DataCite
op_collection_id ftdatacite
language English
topic Bottles or small containers/Aquaria <20 L
Chromista
Laboratory experiment
Laboratory strains
Light
North Pacific
Ochrophyta
Pelagos
Phaeodactylum tricornutum
Primary production/Photosynthesis
Single species
Temperature
Species
Identification
Temperature, water
Treatment
Time in minutes
Effective quantum yield
Damage rate
Damage rate, standard deviation
Repair rate
Repair rate, standard deviation
Non photochemical quenching
Non photochemical quenching, standard deviation
Damage/repair ratio
Damage/repair ratio, standard deviation
Net photosynthesis rate, per cell
Net photosynthesis rate, standard deviation
Ultraviolet radiation-induced inhibition of photosynthesis
Ultraviolet radiation-induced inhibition of photosynthesis, standard deviation
Salinity
Partial pressure of carbon dioxide water at sea surface temperature wet air
pH
pH, standard deviation
Carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard deviation
Bicarbonate ion
Bicarbonate ion, standard deviation
Carbonate ion
Carbonate ion, standard deviation
Carbon dioxide
Alkalinity, total
Alkalinity, total, standard deviation
Carbonate system computation flag
Fugacity of carbon dioxide water at sea surface temperature wet air
Aragonite saturation state
Calcite saturation state
Potentiometric
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. 2010
spellingShingle Bottles or small containers/Aquaria <20 L
Chromista
Laboratory experiment
Laboratory strains
Light
North Pacific
Ochrophyta
Pelagos
Phaeodactylum tricornutum
Primary production/Photosynthesis
Single species
Temperature
Species
Identification
Temperature, water
Treatment
Time in minutes
Effective quantum yield
Damage rate
Damage rate, standard deviation
Repair rate
Repair rate, standard deviation
Non photochemical quenching
Non photochemical quenching, standard deviation
Damage/repair ratio
Damage/repair ratio, standard deviation
Net photosynthesis rate, per cell
Net photosynthesis rate, standard deviation
Ultraviolet radiation-induced inhibition of photosynthesis
Ultraviolet radiation-induced inhibition of photosynthesis, standard deviation
Salinity
Partial pressure of carbon dioxide water at sea surface temperature wet air
pH
pH, standard deviation
Carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard deviation
Bicarbonate ion
Bicarbonate ion, standard deviation
Carbonate ion
Carbonate ion, standard deviation
Carbon dioxide
Alkalinity, total
Alkalinity, total, standard deviation
Carbonate system computation flag
Fugacity of carbon dioxide water at sea surface temperature wet air
Aragonite saturation state
Calcite saturation state
Potentiometric
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. 2010
Li, Yahe
Gao, Kunshan
Villafañe, Virginia E
Helbling, E Walter
Ocean acidification mediates photosynthetic response to UV radiation and temperature increase in the diatom Phaeodactylum tricornutum ...
topic_facet Bottles or small containers/Aquaria <20 L
Chromista
Laboratory experiment
Laboratory strains
Light
North Pacific
Ochrophyta
Pelagos
Phaeodactylum tricornutum
Primary production/Photosynthesis
Single species
Temperature
Species
Identification
Temperature, water
Treatment
Time in minutes
Effective quantum yield
Damage rate
Damage rate, standard deviation
Repair rate
Repair rate, standard deviation
Non photochemical quenching
Non photochemical quenching, standard deviation
Damage/repair ratio
Damage/repair ratio, standard deviation
Net photosynthesis rate, per cell
Net photosynthesis rate, standard deviation
Ultraviolet radiation-induced inhibition of photosynthesis
Ultraviolet radiation-induced inhibition of photosynthesis, standard deviation
Salinity
Partial pressure of carbon dioxide water at sea surface temperature wet air
pH
pH, standard deviation
Carbon, inorganic, dissolved
Carbon, inorganic, dissolved, standard deviation
Bicarbonate ion
Bicarbonate ion, standard deviation
Carbonate ion
Carbonate ion, standard deviation
Carbon dioxide
Alkalinity, total
Alkalinity, total, standard deviation
Carbonate system computation flag
Fugacity of carbon dioxide water at sea surface temperature wet air
Aragonite saturation state
Calcite saturation state
Potentiometric
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. 2010
description Increasing atmospheric CO2 concentration is responsible for progressive ocean acidification, ocean warming as well as decreased thickness of upper mixing layer (UML), thus exposing phytoplankton cells not only to lower pH and higher temperatures but also to higher levels of solar UV radiation. In order to evaluate the combined effects of ocean acidification, UV radiation and temperature, we used the diatom Phaeodactylum tricornutum as a model organism and examined its physiological performance after grown under two CO2 concentrations (390 and 1000 µatm) for more than 20 generations. Compared to the ambient CO2 level (390 µatm), growth at the elevated CO2 concentration increased non-photochemical quenching (NPQ) of cells and partially counteracted the harm to PS II (photosystem II) caused by UV-A and UV-B. Such an effect was less pronounced under increased temperature levels. The ratio of repair to UV-B induced damage decreased with increased NPQ, reflecting induction of NPQ when repair dropped behind the ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2013-11-15. ...
format Dataset
author Li, Yahe
Gao, Kunshan
Villafañe, Virginia E
Helbling, E Walter
author_facet Li, Yahe
Gao, Kunshan
Villafañe, Virginia E
Helbling, E Walter
author_sort Li, Yahe
title Ocean acidification mediates photosynthetic response to UV radiation and temperature increase in the diatom Phaeodactylum tricornutum ...
title_short Ocean acidification mediates photosynthetic response to UV radiation and temperature increase in the diatom Phaeodactylum tricornutum ...
title_full Ocean acidification mediates photosynthetic response to UV radiation and temperature increase in the diatom Phaeodactylum tricornutum ...
title_fullStr Ocean acidification mediates photosynthetic response to UV radiation and temperature increase in the diatom Phaeodactylum tricornutum ...
title_full_unstemmed Ocean acidification mediates photosynthetic response to UV radiation and temperature increase in the diatom Phaeodactylum tricornutum ...
title_sort ocean acidification mediates photosynthetic response to uv radiation and temperature increase in the diatom phaeodactylum tricornutum ...
publisher PANGAEA
publishDate 2012
url https://dx.doi.org/10.1594/pangaea.823078
https://doi.pangaea.de/10.1594/PANGAEA.823078
geographic Pacific
geographic_facet Pacific
genre Ocean acidification
genre_facet Ocean acidification
op_relation https://cran.r-project.org/package=seacarb
https://dx.doi.org/10.5194/bg-9-3931-2012
https://cran.r-project.org/package=seacarb
op_rights Creative Commons Attribution 3.0 Unported
https://creativecommons.org/licenses/by/3.0/legalcode
cc-by-3.0
op_doi https://doi.org/10.1594/pangaea.82307810.5194/bg-9-3931-2012
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